Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_N11
(584 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58750-14|AAB00655.4| 340|Caenorhabditis elegans Hypothetical p... 33 0.15
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 30 1.1
AL132862-21|CAB70232.1| 476|Caenorhabditis elegans Hypothetical... 29 2.4
Z81044-3|CAB02808.1| 178|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF098497-2|AAC64978.1| 144|Caenorhabditis elegans Hypothetical ... 29 3.2
AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical... 29 3.2
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical pr... 27 7.4
AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical ... 27 7.4
AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical ... 27 7.4
AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical ... 27 7.4
U70844-7|AAB09097.1| 686|Caenorhabditis elegans Adam (disintegr... 27 9.8
AL132949-31|CAB61110.3| 297|Caenorhabditis elegans Hypothetical... 27 9.8
>U58750-14|AAB00655.4| 340|Caenorhabditis elegans Hypothetical
protein F55G1.15 protein.
Length = 340
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 555 FSKILKFIAWQEGCIRSIFFVMFHVFS*LTPFRTSRDLTAVFLNDLVSYQLNHPLHCLIG 376
+ ++ FI W + I+++ VM HV L F R L A+ D ++ + PL CL G
Sbjct: 135 YQRVDGFIIWSDAIIQNVDLVMIHVTQWLQYFAVRR-LLALSDKDCIATKRFLPLACLAG 193
Query: 375 V 373
+
Sbjct: 194 L 194
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 33 SVWTGACRPNCSASCSADMLCCGREATLPS 122
++ AC+P+C +SCS++ C +A LPS
Sbjct: 335 TICAAACQPSCQSSCSSNAQCV--QACLPS 362
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 48 ACRPNCSASCSADMLCCGREATLPS 122
AC+P+C +SC ++ C +A +PS
Sbjct: 407 ACQPSCQSSCGSNTQCV--QACIPS 429
>AL132862-21|CAB70232.1| 476|Caenorhabditis elegans Hypothetical
protein Y73F8A.26 protein.
Length = 476
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 216 KCLVICSTSSDWSRFANSSRIFCIIASMRLTV 121
KC ++C DWS + I ++ASMR +V
Sbjct: 219 KCRLLCQDKIDWSVVDGNPEIDILLASMRASV 250
>Z81044-3|CAB02808.1| 178|Caenorhabditis elegans Hypothetical
protein C30H6.8 protein.
Length = 178
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 457 SKGGELGKNMEHHKKNTPNTPFLP-GNE-FQNFRELHSFIIIRV 582
SK E E+++KN P+ P++P G+E Q E + ++I V
Sbjct: 95 SKDKEAAHQEEYYEKNLPDWPYIPFGDENIQKLSEKYKAVVIPV 138
>AF098497-2|AAC64978.1| 144|Caenorhabditis elegans Hypothetical
protein B0294.1 protein.
Length = 144
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -2
Query: 157 YLLYYRIDEVNGEGRVASLPQQSISAEQLAEQLGLHAPVHTLLCDSTR 14
+ ++Y ++++ G +A++PQ ++LA+ G + L D TR
Sbjct: 60 FAMFYPSEQISSFGGIANIPQNQHRKQELAKADGTCQRMEKTLLDKTR 107
>AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical
protein Y71G12B.10 protein.
Length = 318
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 298 GQYESVVAQTVGVGTFDTVLEMLQRVVE 215
G YE + T+GVGT TV +ML V++
Sbjct: 183 GCYEVSLGDTIGVGTVKTVSKMLDTVLK 210
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 134 IDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNR 247
+ I+ K++E +++++EE ++ F N QHL NR
Sbjct: 86 VHGIVDKMKESNQSINENEE--ELWAMFENEAQHLHNR 121
>Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical
protein F40G12.2 protein.
Length = 265
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 179 DQSEEVEQITKHFHNTLQHLKNRIECPD 262
+ E+V ++ +F N LQHLK++ PD
Sbjct: 214 ENCEKVHFLSSNFWNCLQHLKSKNTIPD 241
>AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical
protein T04B8.5c protein.
Length = 836
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -3
Query: 225 VLWKCLVICSTSSDWSRFANSSRIFCIIASMRLTV-RVELPLSRNRAYRPSSSPSSW-AC 52
+ W C+V+ ++ A + IF +++ M + V + L L+ +RP+ SW C
Sbjct: 337 ITWMCVVLVFLVGAMNKIAKLTSIFFLLSYMGVNVATLALELTSAPNFRPTFKYFSWQTC 396
Query: 51 TL 46
L
Sbjct: 397 AL 398
>AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical
protein T04B8.5b protein.
Length = 939
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -3
Query: 225 VLWKCLVICSTSSDWSRFANSSRIFCIIASMRLTV-RVELPLSRNRAYRPSSSPSSW-AC 52
+ W C+V+ ++ A + IF +++ M + V + L L+ +RP+ SW C
Sbjct: 440 ITWMCVVLVFLVGAMNKIAKLTSIFFLLSYMGVNVATLALELTSAPNFRPTFKYFSWQTC 499
Query: 51 TL 46
L
Sbjct: 500 AL 501
>AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical
protein T04B8.5a protein.
Length = 952
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -3
Query: 225 VLWKCLVICSTSSDWSRFANSSRIFCIIASMRLTV-RVELPLSRNRAYRPSSSPSSW-AC 52
+ W C+V+ ++ A + IF +++ M + V + L L+ +RP+ SW C
Sbjct: 453 ITWMCVVLVFLVGAMNKIAKLTSIFFLLSYMGVNVATLALELTSAPNFRPTFKYFSWQTC 512
Query: 51 TL 46
L
Sbjct: 513 AL 514
>U70844-7|AAB09097.1| 686|Caenorhabditis elegans Adam (disintegrin
plus metalloprotease)family protein 4 protein.
Length = 686
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 27 HNSVWTGACRPNCSASCSADMLCCGREATLPS 122
HNS T C P S C AD +C G PS
Sbjct: 500 HNS--THVCLPGDSLLCKADAVCNGFSGECPS 529
>AL132949-31|CAB61110.3| 297|Caenorhabditis elegans Hypothetical
protein Y53F4B.36 protein.
Length = 297
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 192 SSDWSRFANSSRIFCIIASMRLTVRVELPLSRNRAYRPSSSPSSWACTLPSI 37
S W++ ANS+ + R+ V V LPLS +++Y +S ACTL ++
Sbjct: 27 SEHWNKMANSN-FRSEVFENRVHVWV-LPLSLSQSYYGDRDSNSSACTLITV 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,493,746
Number of Sequences: 27780
Number of extensions: 266101
Number of successful extensions: 856
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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