Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N06
         (485 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061423-1|AAL28971.1|  204|Drosophila melanogaster LD35644p pro...   112   3e-25
AE014297-125|AAN13286.1|  204|Drosophila melanogaster CG1057-PB,...   112   3e-25
AE014297-124|AAF52111.1|  204|Drosophila melanogaster CG1057-PA,...   112   3e-25
BT022693-1|AAY55109.1|  184|Drosophila melanogaster IP07178p pro...    29   3.4  
BT022606-1|AAY55022.1|  160|Drosophila melanogaster IP06878p pro...    29   3.4  
AE013599-1491|AAM68685.1|  189|Drosophila melanogaster CG30051-P...    29   3.4  
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy...    28   5.9  

>AY061423-1|AAL28971.1|  204|Drosophila melanogaster LD35644p
           protein.
          Length = 204

 Score =  112 bits (269), Expect = 3e-25
 Identities = 45/67 (67%), Positives = 59/67 (88%)
 Frame = +1

Query: 283 KVMPETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYA 462
           K   E+EE  + R+Q+ELEFVQCL+NPNY++FLAQRG+ K+Q+F+NYLKYLQYW+EP+YA
Sbjct: 9   KTAIESEELQKRRWQIELEFVQCLSNPNYLNFLAQRGFFKDQSFINYLKYLQYWKEPDYA 68

Query: 463 RYLKYPM 483
           +YL YPM
Sbjct: 69  KYLMYPM 75


>AE014297-125|AAN13286.1|  204|Drosophila melanogaster CG1057-PB,
           isoform B protein.
          Length = 204

 Score =  112 bits (269), Expect = 3e-25
 Identities = 45/67 (67%), Positives = 59/67 (88%)
 Frame = +1

Query: 283 KVMPETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYA 462
           K   E+EE  + R+Q+ELEFVQCL+NPNY++FLAQRG+ K+Q+F+NYLKYLQYW+EP+YA
Sbjct: 9   KTAIESEELQKRRWQIELEFVQCLSNPNYLNFLAQRGFFKDQSFINYLKYLQYWKEPDYA 68

Query: 463 RYLKYPM 483
           +YL YPM
Sbjct: 69  KYLMYPM 75


>AE014297-124|AAF52111.1|  204|Drosophila melanogaster CG1057-PA,
           isoform A protein.
          Length = 204

 Score =  112 bits (269), Expect = 3e-25
 Identities = 45/67 (67%), Positives = 59/67 (88%)
 Frame = +1

Query: 283 KVMPETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYA 462
           K   E+EE  + R+Q+ELEFVQCL+NPNY++FLAQRG+ K+Q+F+NYLKYLQYW+EP+YA
Sbjct: 9   KTAIESEELQKRRWQIELEFVQCLSNPNYLNFLAQRGFFKDQSFINYLKYLQYWKEPDYA 68

Query: 463 RYLKYPM 483
           +YL YPM
Sbjct: 69  KYLMYPM 75


>BT022693-1|AAY55109.1|  184|Drosophila melanogaster IP07178p
           protein.
          Length = 184

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +3

Query: 252 YFSNSQNDGSKSYAGDRRAEQNKISSGA*ICTVFSKP*LYS--FFSSAWIFERADICKLL 425
           YF+ S N+ + +       +Q   S+G  I TVFS P L +       W++    +   L
Sbjct: 97  YFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPILLNCMLLIGTWLYNSTQLMVTL 156

Query: 426 EIPSILERAR 455
           +   + ERAR
Sbjct: 157 KTAQLKERAR 166


>BT022606-1|AAY55022.1|  160|Drosophila melanogaster IP06878p
           protein.
          Length = 160

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +3

Query: 252 YFSNSQNDGSKSYAGDRRAEQNKISSGA*ICTVFSKP*LYS--FFSSAWIFERADICKLL 425
           YF+ S N+ + +       +Q   S+G  I TVFS P L +       W++    +   L
Sbjct: 73  YFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPILLNCMLLIGTWLYNSTQLMVTL 132

Query: 426 EIPSILERAR 455
           +   + ERAR
Sbjct: 133 KTAQLKERAR 142


>AE013599-1491|AAM68685.1|  189|Drosophila melanogaster CG30051-PB
           protein.
          Length = 189

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +3

Query: 252 YFSNSQNDGSKSYAGDRRAEQNKISSGA*ICTVFSKP*LYS--FFSSAWIFERADICKLL 425
           YF+ S N+ + +       +Q   S+G  I TVFS P L +       W++    +   L
Sbjct: 102 YFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPILLNCMLLIGTWLYNSTQLMVTL 161

Query: 426 EIPSILERAR 455
           +   + ERAR
Sbjct: 162 KTAQLKERAR 171


>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
            chain protein.
          Length = 4559

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 129  EAVIRLLSILFQQLQNFTIYDIIFSQLSISIDLL 230
            E ++++LS+L Q  +   IYD +F  L   IDLL
Sbjct: 1216 EGLVKILSVLNQINEKQCIYDSMFDPLKEIIDLL 1249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,538,821
Number of Sequences: 53049
Number of extensions: 263829
Number of successful extensions: 607
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)