Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N05
         (474 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75542-2|CAA99862.2|  712|Caenorhabditis elegans Hypothetical pr...    32   0.24 
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    29   1.3  
AL032632-2|CAA21590.1|  161|Caenorhabditis elegans Hypothetical ...    29   1.7  
Z46996-9|CAA87097.2|  400|Caenorhabditis elegans Hypothetical pr...    28   3.0  
AL021503-1|CAA16420.2|  309|Caenorhabditis elegans Hypothetical ...    28   3.9  
Z74041-4|CAD56597.1|  394|Caenorhabditis elegans Hypothetical pr...    27   5.2  
Z74041-3|CAA98522.1|  368|Caenorhabditis elegans Hypothetical pr...    27   5.2  
U46753-12|AAM98047.2|  539|Caenorhabditis elegans Dishevelled re...    27   5.2  
U46753-10|AAM98049.1|  623|Caenorhabditis elegans Dishevelled re...    27   5.2  
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p...    27   5.2  
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p...    27   5.2  
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p...    27   5.2  
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p...    27   5.2  
AF098992-9|AAC67451.1|  425|Caenorhabditis elegans Hypothetical ...    27   5.2  
Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z48334-2|CAA88309.1|  357|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U21308-1|AAB93314.3|  300|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF025451-6|AAB71203.1|  133|Caenorhabditis elegans Hypothetical ...    27   9.1  
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z75542-2|CAA99862.2|  712|Caenorhabditis elegans Hypothetical
           protein F55D12.2 protein.
          Length = 712

 Score = 31.9 bits (69), Expect = 0.24
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 65  LQKYIPVDMLPKEYGGNGCTLTEVNKAWLKKLEDYRHWFKVQESIKADES 214
           L K++ V+ LP+++GG   TL     +WL K  + + W      + AD S
Sbjct: 128 LSKFVDVNQLPEQFGG---TLGYDPDSWLSKRIEIKKWQNYLVEVDADSS 174


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
           protein Y66D12A.14 protein.
          Length = 2870

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
 Frame = +2

Query: 14  LKEKLKNRVYFHTDVKGLQK------YIPVDMLPKEYGGNGCTLTEVNKAWLKKLEDYRH 175
           L +KLKN +Y H ++K  Q+      +  + ++ +E G  G  +T+++K  +     + H
Sbjct: 74  LSQKLKNELYLHVNLKKEQQTSRSSIFESIFLMLEELGIIGERVTKISKLCV----PFVH 129

Query: 176 WFKVQESIKADESLRPGKPTNYDELFG-IEGS--FRQLSID*FNRIK 307
           + KV+ S+K+ E            LFG + GS  F+++S D F  +K
Sbjct: 130 FGKVRISVKSQEK-SGNVIVEIFNLFGSLFGSINFQEISDDVFLTVK 175


>AL032632-2|CAA21590.1|  161|Caenorhabditis elegans Hypothetical
           protein Y11D7A.5 protein.
          Length = 161

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 427 YSLKYCRLTKNN*ITSGNMVTFLKNKKWISGILLNLRN 314
           Y L   +LTK N + +   +T   N K +SGI   L+N
Sbjct: 108 YLLVSAKLTKMNEVLNTKKITAANNSKMLSGIYTELKN 145


>Z46996-9|CAA87097.2|  400|Caenorhabditis elegans Hypothetical
           protein C34C12.6 protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 11  FLKEKLKNRVYFHTDVKGLQ-KYIPVDMLPKEYGG 112
           FL E+   R+   +D   L  K++P  ++PKEYGG
Sbjct: 230 FLSEENLKRIEIISDKSDLAGKFLPPWLVPKEYGG 264


>AL021503-1|CAA16420.2|  309|Caenorhabditis elegans Hypothetical
           protein Y68A4A.2 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -3

Query: 211 FVRLYRLLYFEPVSVIFEFLKPRFVNFSEGTT--IAAVFFR*HIYWYVFLQAFYIGMKIY 38
           F ++ ++ Y   VS  F F+    +N S+     IA +FF      Y+  QAF++ + + 
Sbjct: 68  FCQMVKVSYLVFVSACFNFILVVNINSSQINIVLIALLFFALFNVLYIITQAFHVLIFVL 127

Query: 37  PIF*FFL 17
            +  FFL
Sbjct: 128 AVERFFL 134


>Z74041-4|CAD56597.1|  394|Caenorhabditis elegans Hypothetical
           protein T03F7.7b protein.
          Length = 394

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 35  RVYFHTDVKGLQKYIPVDMLPKEYGG 112
           ++ F ++V+ L+KY+  + +P EYGG
Sbjct: 227 KLAFLSNVEDLKKYLEPEAIPVEYGG 252


>Z74041-3|CAA98522.1|  368|Caenorhabditis elegans Hypothetical
           protein T03F7.7a protein.
          Length = 368

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 35  RVYFHTDVKGLQKYIPVDMLPKEYGG 112
           ++ F ++V+ L+KY+  + +P EYGG
Sbjct: 227 KLAFLSNVEDLKKYLEPEAIPVEYGG 252


>U46753-12|AAM98047.2|  539|Caenorhabditis elegans Dishevelled
           related protein 1,isoform a protein.
          Length = 539

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
 Frame = +2

Query: 35  RVYFH----TDVKGLQKYIPVDMLPKEYGGNGCTLTEVNKAWLKKLEDYRHWFKVQESIK 202
           +VY H    TD   L+ ++P D++    G     L   N  + +K  D    ++V+  I+
Sbjct: 73  KVYCHIDDETDPYMLEVHVPPDLIT--LGDLKRVLMRTNFKYYRKALDPDSGYEVKAEIR 130

Query: 203 ADESLRPGKPTNYDELF--GIEGS 268
            D       P N  ELF   IEGS
Sbjct: 131 DDSQRLTPSPNNLFELFLLTIEGS 154


>U46753-10|AAM98049.1|  623|Caenorhabditis elegans Dishevelled
           related protein 1,isoform c protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
 Frame = +2

Query: 35  RVYFH----TDVKGLQKYIPVDMLPKEYGGNGCTLTEVNKAWLKKLEDYRHWFKVQESIK 202
           +VY H    TD   L+ ++P D++    G     L   N  + +K  D    ++V+  I+
Sbjct: 73  KVYCHIDDETDPYMLEVHVPPDLIT--LGDLKRVLMRTNFKYYRKALDPDSGYEVKAEIR 130

Query: 203 ADESLRPGKPTNYDELF--GIEGS 268
            D       P N  ELF   IEGS
Sbjct: 131 DDSQRLTPSPNNLFELFLLTIEGS 154


>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
            protein F35D11.11a protein.
          Length = 1840

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +3

Query: 141  KRGLRNSKITDTGSKYRSL*RRTNL*DQENQQTTMNCSELKAHSDN 278
            ++G     + +T ++ R++ +     ++ENQQ   NC++L+A   N
Sbjct: 1701 EKGKTEKAVRETMNERRAIDKSLASMERENQQLYRNCAQLQAQIQN 1746


>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
            protein F35D11.11c protein.
          Length = 1898

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +3

Query: 141  KRGLRNSKITDTGSKYRSL*RRTNL*DQENQQTTMNCSELKAHSDN 278
            ++G     + +T ++ R++ +     ++ENQQ   NC++L+A   N
Sbjct: 1701 EKGKTEKAVRETMNERRAIDKSLASMERENQQLYRNCAQLQAQIQN 1746


>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
            protein F35D11.11d protein.
          Length = 1671

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +3

Query: 141  KRGLRNSKITDTGSKYRSL*RRTNL*DQENQQTTMNCSELKAHSDN 278
            ++G     + +T ++ R++ +     ++ENQQ   NC++L+A   N
Sbjct: 1461 EKGKTEKAVRETMNERRAIDKSLASMERENQQLYRNCAQLQAQIQN 1506


>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
            protein F35D11.11b protein.
          Length = 1911

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +3

Query: 141  KRGLRNSKITDTGSKYRSL*RRTNL*DQENQQTTMNCSELKAHSDN 278
            ++G     + +T ++ R++ +     ++ENQQ   NC++L+A   N
Sbjct: 1701 EKGKTEKAVRETMNERRAIDKSLASMERENQQLYRNCAQLQAQIQN 1746


>AF098992-9|AAC67451.1|  425|Caenorhabditis elegans Hypothetical
           protein F53C3.11 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 315 FLKFNNIPDIHFLFFKNVTILPDVIQLFLVNLQYF 419
           F  F N+P+IH L   N TI+ D++   + N++ F
Sbjct: 107 FGNFRNVPEIHKLLIHN-TIMDDLVLEQVNNMEIF 140


>Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical
           protein F20E11.1 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = -3

Query: 211 FVRLYRLLYFEPVSVIFEFLKPRFVNF--SEGTTIAAVFFR*HIYWYVFLQAFYIGMKIY 38
           F ++ ++ Y   VS  F F+    VN   +    IA +FF      Y+  QAF++ + + 
Sbjct: 67  FCQMVKVSYLVFVSACFNFILAVSVNSLQTNRVLIALLFFALFNVLYIITQAFHVLIFVL 126

Query: 37  PIF*FFL 17
            +  FF+
Sbjct: 127 AVERFFI 133


>Z48334-2|CAA88309.1|  357|Caenorhabditis elegans Hypothetical
           protein F10B5.2 protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = +2

Query: 161 EDYRHWFKVQESIKAD--ESLRP--GKPTNYDELFGIEGSFRQ 277
           E+YR W+ + + I AD  E + P  G+ T+  EL  +E  F +
Sbjct: 120 ENYRSWYGLTDFITADTVERIHPILGRITSQAELVSLETEFME 162


>U21308-1|AAB93314.3|  300|Caenorhabditis elegans Hypothetical
           protein ZK1290.7 protein.
          Length = 300

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -1

Query: 399 KITESHRAIW*HF*KIKNGYPVYY*T*EIAVFIRLNQSIDSCLNEPSIPNSSS*F 235
           K++E  R +   F KI N YPV   T    V + +    +  LN+ ++P+S S F
Sbjct: 142 KLSEREREL---FQKIGNYYPVAIGTKSGLVNVTMKPQYNYSLNDSAVPSSKSEF 193


>AF025451-6|AAB71203.1|  133|Caenorhabditis elegans Hypothetical
           protein C24H12.7 protein.
          Length = 133

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 312 LFLKFNNIPDIHFLFFKNVTILPDVIQL 395
           LF K   +  +  L FKNV I+PD+  L
Sbjct: 21  LFKKLFRLTQLPLLAFKNVIIIPDINDL 48


>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
           protein Y39D8B.1 protein.
          Length = 1372

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 125 LTEVNKAWLKKLEDYRHWFKVQESIKADESLR-PGKPTNYDEL 250
           LTE+ +A   K E  + W +V + IK DES R  GK  N + +
Sbjct: 307 LTELVRAGKNKQEPPKRWQQVIQEIK-DESFRIKGKKNNKERM 348


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,440,213
Number of Sequences: 27780
Number of extensions: 210421
Number of successful extensions: 498
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)