Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_N03
(496 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q95RI7 Cluster: LD28068p; n=6; Endopterygota|Rep: LD280... 80 2e-14
UniRef50_O75940 Cluster: Survival of motor neuron-related-splici... 56 6e-07
UniRef50_A7QCD2 Cluster: Chromosome undetermined scaffold_77, wh... 45 0.001
UniRef50_Q95Y51 Cluster: Smn (Survival of motor neuron protein) ... 41 0.013
UniRef50_A7S946 Cluster: Predicted protein; n=1; Nematostella ve... 41 0.013
UniRef50_UPI0000E4713B Cluster: PREDICTED: similar to RAD26L hyp... 38 0.12
UniRef50_Q5TN18 Cluster: ENSANGP00000025536; n=1; Anopheles gamb... 38 0.16
UniRef50_Q86E18 Cluster: Clone ZZZ331 mRNA sequence; n=2; Schist... 36 0.38
UniRef50_Q16637-2 Cluster: Isoform SMN; n=6; Amniota|Rep: Isofor... 35 1.1
UniRef50_Q16637 Cluster: Survival motor neuron protein; n=44; Eu... 35 1.1
UniRef50_A7TJU2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_O18870 Cluster: Survival motor neuron protein; n=6; Bos... 33 3.5
UniRef50_UPI000069F679 Cluster: Survival motor neuron protein (C... 33 4.6
UniRef50_UPI00015B5D2B Cluster: PREDICTED: similar to conserved ... 32 6.1
UniRef50_Q3UW10 Cluster: Adult male epididymis cDNA, RIKEN full-... 32 6.1
UniRef50_A2TTL4 Cluster: Potassium channel protein; n=8; Bactero... 32 6.1
UniRef50_Q86ED9 Cluster: Clone ZZD493 mRNA sequence; n=2; Schist... 32 6.1
UniRef50_UPI0000DB6DA1 Cluster: PREDICTED: similar to CG13472-PA... 32 8.1
UniRef50_A3BRM1 Cluster: Putative uncharacterized protein; n=4; ... 32 8.1
UniRef50_A7TPT3 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
>UniRef50_Q95RI7 Cluster: LD28068p; n=6; Endopterygota|Rep: LD28068p
- Drosophila melanogaster (Fruit fly)
Length = 243
Score = 80.2 bits (189), Expect = 2e-14
Identities = 50/116 (43%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Frame = +2
Query: 173 MADDLRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLI--------KSQDGD 328
MADDL NYKLQLQQVEAAL TD +N VI LT+DLI KS +
Sbjct: 1 MADDLHNYKLQLQQVEAALQTDPENEELLKLRSDLDEVITLTRDLIQTQLEEQNKSSYVE 60
Query: 329 PKVHNIHGSSNDDDVTASLLVAAENDAVEKFYAKWNVGEKCLAKWRADGMFYEATI 496
P S+ D++ A+LL A + + K W G+KC AKW+ D +Y+ATI
Sbjct: 61 PSSTKRDSSNYFDEIEAALLEAEKLVSAAKI---WKKGDKCQAKWKEDRQYYDATI 113
>UniRef50_O75940 Cluster: Survival of motor neuron-related-splicing
factor 30; n=23; Deuterostomia|Rep: Survival of motor
neuron-related-splicing factor 30 - Homo sapiens (Human)
Length = 238
Score = 55.6 bits (128), Expect = 6e-07
Identities = 37/108 (34%), Positives = 52/108 (48%)
Frame = +2
Query: 173 MADDLRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLIKSQDGDPKVHNIHG 352
+A L +YK QLQQVEAAL + +N VIELT+DL+ +Q +
Sbjct: 5 LAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSE-------- 56
Query: 353 SSNDDDVTASLLVAAENDAVEKFYAKWNVGEKCLAKWRADGMFYEATI 496
L ++++ A + W VG+KC+A W DG YEA I
Sbjct: 57 ----------TLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEI 94
>UniRef50_A7QCD2 Cluster: Chromosome undetermined scaffold_77, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_77, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 301
Score = 44.8 bits (101), Expect = 0.001
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +2
Query: 164 LNSMADDLRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLIKSQDGDPKVHN 343
++ +A +L YK QLQQV L+ D N VI LT++L+ +
Sbjct: 9 IDELASNLSTYKDQLQQVRKLLVDDPGNSEYVDMEKELEEVIVLTEELLATAKQSEISLP 68
Query: 344 IHGSSNDDDVTASLLVAAENDAVE-----KFYAKWNVGEKCLAKWRADGMFYEATI 496
G++ D + +E Y K+ +G K A W DG +YEATI
Sbjct: 69 AFGTNADASPIQHQSGGSSEHLMEPGNNSDHYGKFPIGTKVQAVWSEDGEWYEATI 124
>UniRef50_Q95Y51 Cluster: Smn (Survival of motor neuron protein)
related protein 1, isoform a; n=3; Caenorhabditis|Rep:
Smn (Survival of motor neuron protein) related protein
1, isoform a - Caenorhabditis elegans
Length = 239
Score = 41.1 bits (92), Expect = 0.013
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 173 MADDLRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLIKSQDGD 328
M ++L +YKLQLQQVEAALL D N +I L +DL ++ +
Sbjct: 1 MEEELASYKLQLQQVEAALLGDPTNVELLKLKEDLGEIISLQEDLAETDKAE 52
>UniRef50_A7S946 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 231
Score = 41.1 bits (92), Expect = 0.013
Identities = 35/105 (33%), Positives = 41/105 (39%)
Frame = +2
Query: 182 DLRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLIKSQDGDPKVHNIHGSSN 361
+L Y+ QL QV+AAL TD N VI LT DL
Sbjct: 10 NLTQYRAQLSQVDAALTTDPDNEELLKLKQDLEEVINLTLDL------------------ 51
Query: 362 DDDVTASLLVAAENDAVEKFYAKWNVGEKCLAKWRADGMFYEATI 496
L V + E AKW VG +C A W DG +Y ATI
Sbjct: 52 -------LKVNVKVPEAELPNAKWKVGHRCQAVWTQDGNYYPATI 89
>UniRef50_UPI0000E4713B Cluster: PREDICTED: similar to RAD26L
hypothetical protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RAD26L
hypothetical protein, partial - Strongylocentrotus
purpuratus
Length = 827
Score = 37.9 bits (84), Expect = 0.12
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 323 GDPKVHNIHGSSNDDDVTASLLVAAENDAVEKFYAKWNVGEKCLAKWRADGMFYEATI 496
G + + SS D + L AA + + KW++G+KC+A + DG Y+A I
Sbjct: 214 GPSRTGSASRSSGDGEDGQELGSAARKTEEAEDHRKWSIGDKCMAPFSGDGSLYKAVI 271
Score = 32.7 bits (71), Expect = 4.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 428 KWNVGEKCLAKWRADGMFYEATI 496
KW+ G+KC+A + DG Y+A I
Sbjct: 431 KWSTGDKCMAPFSGDGSLYKAAI 453
>UniRef50_Q5TN18 Cluster: ENSANGP00000025536; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000025536 - Anopheles gambiae
str. PEST
Length = 207
Score = 37.5 bits (83), Expect = 0.16
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 407 AVEKFYAKWNVGEKCLAKWRADGMFYEATI 496
A+ Y W +G++CLAK+ DG FY A I
Sbjct: 149 AIPAVYTNWKIGDRCLAKYWEDGGFYTAEI 178
>UniRef50_Q86E18 Cluster: Clone ZZZ331 mRNA sequence; n=2;
Schistosoma japonicum|Rep: Clone ZZZ331 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 118
Score = 36.3 bits (80), Expect = 0.38
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 182 DLRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLIKSQDGDPKV 337
DL N+KLQLQQVEAAL + N VI+L+ +L+ P++
Sbjct: 8 DLLNHKLQLQQVEAALELNPNNEELLQLKRDLEEVIKLSLELLGRTSDTPEI 59
>UniRef50_Q16637-2 Cluster: Isoform SMN; n=6; Amniota|Rep: Isoform
SMN - Homo sapiens (Human)
Length = 262
Score = 34.7 bits (76), Expect = 1.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 428 KWNVGEKCLAKWRADGMFYEATI 496
+W VG+KC A W DG Y ATI
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATI 113
>UniRef50_Q16637 Cluster: Survival motor neuron protein; n=44;
Euteleostomi|Rep: Survival motor neuron protein - Homo
sapiens (Human)
Length = 294
Score = 34.7 bits (76), Expect = 1.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 428 KWNVGEKCLAKWRADGMFYEATI 496
+W VG+KC A W DG Y ATI
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATI 113
>UniRef50_A7TJU2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 296
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 311 KSQDGDPKVHNIHGSSNDDDVTASLLVAAENDAVEKFYAK 430
+S P H+ H ++N DD T L E DAV KF+ K
Sbjct: 87 RSNSSSPVHHHHHNTTNYDDCTNIFLKFEEEDAVTKFFIK 126
>UniRef50_O18870 Cluster: Survival motor neuron protein; n=6; Bos
taurus|Rep: Survival motor neuron protein - Bos taurus
(Bovine)
Length = 287
Score = 33.1 bits (72), Expect = 3.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 428 KWNVGEKCLAKWRADGMFYEATI 496
+W VG+ C A W DG Y ATI
Sbjct: 86 QWKVGDNCCAIWSEDGCIYPATI 108
>UniRef50_UPI000069F679 Cluster: Survival motor neuron protein
(Component of gems 1) (Gemin-1).; n=1; Xenopus
tropicalis|Rep: Survival motor neuron protein (Component
of gems 1) (Gemin-1). - Xenopus tropicalis
Length = 222
Score = 32.7 bits (71), Expect = 4.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 422 YAKWNVGEKCLAKWRADGMFYEATI 496
+ +W VG++C +W DG Y A I
Sbjct: 68 FLQWKVGDRCSVQWSEDGQIYSAII 92
>UniRef50_UPI00015B5D2B Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 718
Score = 32.3 bits (70), Expect = 6.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 431 WNVGEKCLAKWRADGMFYEATI 496
W VG++C+AK+ D M+Y A +
Sbjct: 585 WRVGDRCMAKYWEDNMYYNAEV 606
>UniRef50_Q3UW10 Cluster: Adult male epididymis cDNA, RIKEN
full-length enriched library, clone:9230105F20
product:hypothetical protein, full insert sequence; n=1;
Mus musculus|Rep: Adult male epididymis cDNA, RIKEN
full-length enriched library, clone:9230105F20
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 120
Score = 32.3 bits (70), Expect = 6.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 488 PHRTCHQLSI*QGTFHPHSIWHKTFPQRHFPRPPAG 381
P CH+ + +G HP H+ ++ FPRPPAG
Sbjct: 61 PSEACHKEARREGELHPTLDLHRE--EKQFPRPPAG 94
>UniRef50_A2TTL4 Cluster: Potassium channel protein; n=8;
Bacteroidetes|Rep: Potassium channel protein - Dokdonia
donghaensis MED134
Length = 339
Score = 32.3 bits (70), Expect = 6.1
Identities = 10/30 (33%), Positives = 22/30 (73%)
Frame = +2
Query: 284 VIELTQDLIKSQDGDPKVHNIHGSSNDDDV 373
VIE+ D+I+ + D +H ++G++N+D++
Sbjct: 139 VIEMDTDIIEKYESDNNIHFVNGNANEDEI 168
>UniRef50_Q86ED9 Cluster: Clone ZZD493 mRNA sequence; n=2;
Schistosoma japonicum|Rep: Clone ZZD493 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 298
Score = 32.3 bits (70), Expect = 6.1
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 350 GSSNDDDVTASLLVAAENDAVEKFYAKWN 436
GSS+DD V+A +V +END++ + K+N
Sbjct: 248 GSSSDDSVSAEQIVCSENDSLTNNHQKYN 276
>UniRef50_UPI0000DB6DA1 Cluster: PREDICTED: similar to CG13472-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG13472-PA - Apis mellifera
Length = 601
Score = 31.9 bits (69), Expect = 8.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 431 WNVGEKCLAKWRADGMFYEATI 496
W VG+KCLAK+ D +Y A +
Sbjct: 460 WRVGDKCLAKYWEDNRYYNAKV 481
>UniRef50_A3BRM1 Cluster: Putative uncharacterized protein; n=4;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 812
Score = 31.9 bits (69), Expect = 8.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 329 PKVHNIHGSSNDDDVTASLLVAAENDAVEKFYAKWNVGEKCLAKWRADG 475
P +HN+ ++ND ++L+ N A+E+F++ E L K + +G
Sbjct: 255 PILHNLSANANDGYTEKNVLLDLANRAMEEFFSLMKENESLLVKKKENG 303
>UniRef50_A7TPT3 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 248
Score = 31.9 bits (69), Expect = 8.1
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +2
Query: 185 LRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLIKSQDGDPKVHNIHGSSND 364
LR Y+L L + E + TD N T+D I DG V + G +ND
Sbjct: 112 LREYRLDLFRKEMGIHTDQINIDQATSIDTLQPTDNATEDSIPIPDGRLFVADEEGDNND 171
Query: 365 DD 370
DD
Sbjct: 172 DD 173
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,354,675
Number of Sequences: 1657284
Number of extensions: 7388960
Number of successful extensions: 17719
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 17292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17714
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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