Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N03
         (496 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061350-1|AAL28898.1|  243|Drosophila melanogaster LD28068p pro...    80   1e-15
AY069766-1|AAL39911.1|  836|Drosophila melanogaster RE01471p pro...    30   1.5  
AE014296-2431|AAF49703.1|  836|Drosophila melanogaster CG13472-P...    30   1.5  

>AY061350-1|AAL28898.1|  243|Drosophila melanogaster LD28068p
           protein.
          Length = 243

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 50/116 (43%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
 Frame = +2

Query: 173 MADDLRNYKLQLQQVEAALLTDSQNXXXXXXXXXXXXVIELTQDLI--------KSQDGD 328
           MADDL NYKLQLQQVEAAL TD +N            VI LT+DLI        KS   +
Sbjct: 1   MADDLHNYKLQLQQVEAALQTDPENEELLKLRSDLDEVITLTRDLIQTQLEEQNKSSYVE 60

Query: 329 PKVHNIHGSSNDDDVTASLLVAAENDAVEKFYAKWNVGEKCLAKWRADGMFYEATI 496
           P       S+  D++ A+LL A +  +  K    W  G+KC AKW+ D  +Y+ATI
Sbjct: 61  PSSTKRDSSNYFDEIEAALLEAEKLVSAAKI---WKKGDKCQAKWKEDRQYYDATI 113


>AY069766-1|AAL39911.1|  836|Drosophila melanogaster RE01471p
           protein.
          Length = 836

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 431 WNVGEKCLAKWRADGMFYEATI 496
           W  G+ C+AK+  DG +YEA I
Sbjct: 732 WQKGDLCMAKYWDDGRYYEAEI 753


>AE014296-2431|AAF49703.1|  836|Drosophila melanogaster CG13472-PA
           protein.
          Length = 836

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 431 WNVGEKCLAKWRADGMFYEATI 496
           W  G+ C+AK+  DG +YEA I
Sbjct: 732 WQKGDLCMAKYWDDGRYYEAEI 753


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,208,138
Number of Sequences: 53049
Number of extensions: 342521
Number of successful extensions: 791
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)