Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N03
         (496 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    26   0.25 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    26   0.25 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.1  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   7.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.2  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   9.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   9.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.5  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   9.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.5  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -2

Query: 189 LKSSAIELRNYWFLFGLNRFRQNIYHKHIYFILL 88
           L ++ I   NY + +  N +  N Y+K +Y+ ++
Sbjct: 84  LSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNII 117


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -2

Query: 189 LKSSAIELRNYWFLFGLNRFRQNIYHKHIYFILL 88
           L ++ I   NY + +  N +  N Y+K +Y+ ++
Sbjct: 84  LSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNII 117


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -3

Query: 428 WHKTFPQRHFPR 393
           WH+  P+ +FP+
Sbjct: 263 WHEPIPEAYFPK 274


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
          protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 85 SNIFQTICQNCNLLT 41
          SN++Q  C NC   T
Sbjct: 40 SNVYQYRCANCTYAT 54


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 384 CWWPRKMTLWKSFMPNGM 437
           C+WPR   L  + + +GM
Sbjct: 142 CYWPRGKNLGGTTLHHGM 159


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = -1

Query: 157 LVFIWTK*ISSKYIPQTHLLYFIRSNIFQTICQN 56
           LVF+W +    + +   HL  F     F   C +
Sbjct: 188 LVFLWKEGDPVQVVKNLHLPRFTLEKFFTDYCNS 221


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = -1

Query: 157 LVFIWTK*ISSKYIPQTHLLYFIRSNIFQTICQN 56
           LVF+W +    + +   HL  F     F   C +
Sbjct: 188 LVFLWKEGDPVQVVKNLHLPRFTLEKFFTDYCNS 221


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 3   RGGLEPRAINNTNVNKLQF*QIVWKILDLI 92
           R G E  A+N  NV +++  Q + ++ DL+
Sbjct: 207 RMGREVFAVNFMNVMRMKLKQFMPRLYDLL 236


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -2

Query: 189 LKSSAIELRNYWFLFGLNRFRQNIYHKHIYFILLGPIFSKQFVK 58
           +   +  L++  F   L+   QN+Y+  +    L  + ++QFVK
Sbjct: 240 INGESFTLQSGIFGMALSPLTQNLYYSALSSHNLNYVNTEQFVK 283


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 123 NIYHKHIYFILLGPIFSKQ 67
           N+ H H     + P+F+KQ
Sbjct: 2   NVLHIHYQHYHITPVFTKQ 20


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,578
Number of Sequences: 438
Number of extensions: 2481
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)