Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_N01
(503 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F12.02c |p23fy||translationally controlled tumor protein ho... 132 3e-32
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.40
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 28 0.69
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 28 0.69
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 28 0.69
SPAC30D11.07 |nth1||DNA endonuclease III|Schizosaccharomyces pom... 28 0.69
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 0.92
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 27 1.2
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 27 2.1
SPBC1271.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 2.8
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 4.9
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 4.9
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 25 6.5
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 25 6.5
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 25 6.5
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 25 8.5
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 25 8.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 8.5
>SPAC1F12.02c |p23fy||translationally controlled tumor protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 168
Score = 132 bits (319), Expect = 3e-32
Identities = 68/148 (45%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Frame = +3
Query: 60 MIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTV-IRTQDDIHIDGFNPSAEEADEGTD 236
M++YKDVI+GDE+ SD Y +K +D+++YE + V ++ D+ I G NPSAE+A+E +
Sbjct: 1 MLLYKDVISGDELVSDAYDLKEVDDIVYEADCQMVTVKQGGDVDI-GANPSAEDAEENAE 59
Query: 237 SNVETGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKV 416
ET ++V + RL T +F DKKSY Y+K YMK + A+L+E P++V +F+ N
Sbjct: 60 EGTETVNNLVYSFRLSPT-SF-DKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGF 117
Query: 417 MKDILARFKDLQFFTGESMDCDGMVAMM 500
+K ILA FKD F+ GESMD D MV +M
Sbjct: 118 VKKILANFKDYDFYIGESMDPDAMVVLM 145
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.40
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = -2
Query: 298 NAYVSTSL*FRTM---STPVSTLESVPSSA---SSAEGLNPSMWISSCVLITVLPVTS*I 137
N STS+ + + STP++T S++ +S + + ISS +T PVT+
Sbjct: 531 NCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 590
Query: 136 TSSINLTLYVSENISSPVITS 74
++ LY S I+SP TS
Sbjct: 591 CTTSTSVLYTSTPITSPNSTS 611
Score = 25.8 bits (54), Expect = 3.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -2
Query: 259 STPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSSINLTLYVSENISSPVI 80
+TPV+ +VP ++SS + S+ V T PVTS ++ N T S +S +
Sbjct: 406 TTPVTP--TVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPV 463
Query: 79 TS 74
TS
Sbjct: 464 TS 465
Score = 24.6 bits (51), Expect = 8.5
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -2
Query: 265 TMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS-*ITSSINLTLYVSENISS 89
++STP++ S++S++ + P+ S+ + LP TS T+S ++ S ++S+
Sbjct: 186 SLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLST 245
Query: 88 PV 83
P+
Sbjct: 246 PI 247
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 28.3 bits (60), Expect = 0.69
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +3
Query: 129 DEVIYEVTGKTVIRTQDDIHIDGFNPSAEE-----ADEGTDSNVET-GVDIVLNHRLVE 287
DE+ + + +D + + F EE A E ++ +T +D+VL+HRL+E
Sbjct: 145 DEIRFSSRNSKGVNYNEDAYFESFEEEEEEEMYEYATEVSEEPEDTRAIDVVLDHRLIE 203
>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 579
Score = 28.3 bits (60), Expect = 0.69
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 12 SRSFGFIILNRLQSIKMIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTVIR 170
SR+ + I +L +++YK + M DT++ ++ +YE++G +R
Sbjct: 118 SRNLLYSIAEKLGLSSIVVYKAELITSSMLLDTFQTMESNQEMYELSGTRKMR 170
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 28.3 bits (60), Expect = 0.69
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 117 VKLIDEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYA 296
+KLID I + G D HI N A EA +++ +GV +V R + ++
Sbjct: 455 LKLIDFGIAKAIGNDTTNIHRDSHIGTINYMAPEALTDMNAHTNSGVKLVKLGRPSDVWS 514
Query: 297 FG 302
G
Sbjct: 515 LG 516
>SPAC30D11.07 |nth1||DNA endonuclease III|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 355
Score = 28.3 bits (60), Expect = 0.69
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 255 VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKT 401
+D V ++L+E F ++K T+YLK + L K + PD V+ T
Sbjct: 89 IDEVSLNKLIEKVGFHNRK--TIYLKQMARILSEKFQGDIPDTVEDLMT 135
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.9 bits (59), Expect = 0.92
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -2
Query: 289 VSTSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSSINLTLY 110
+S+SL + STP T PS+ S L PS S+ +++ V S +TS I+ T
Sbjct: 566 ISSSLTATSTSTPALTHSITPSNTSYTSSLIPSS--STDYSSSLITVCSNVTSEISSTSL 623
Query: 109 VS 104
S
Sbjct: 624 AS 625
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 179 VLCSDHGLAGDFINNFVDQLNFIRIREHLVTSYNILIDYHFDGLE 45
V+C D GL+G+F + IR + + Y LI Y FDG E
Sbjct: 288 VMCLDLGLSGEFCTAVA---HSIREQCQMYIKYLSLIGYLFDGSE 329
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 26.6 bits (56), Expect = 2.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 159 TVIRTQDDIHIDGFNPSAEEADEGTDSNVE 248
T+ ++DDIH D ++ A+ DE SNVE
Sbjct: 50 TIDDSEDDIHYDDYD--ADAVDEEMPSNVE 77
>SPBC1271.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 140
Score = 26.2 bits (55), Expect = 2.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 33 ILNRLQSIKMIIYKDVITGDEMFSDTYKVKLID 131
ILN++ M IY IT D SDTY++ D
Sbjct: 30 ILNKIFHPCMYIYSRGITNDTYSSDTYELDWYD 62
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 4.9
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 289 VSTSL*FRTMSTPVSTLESVPSS-ASSAEGLNPSMW 185
V+T++ + + STPVST+ +P++ S GL +++
Sbjct: 981 VATTITYSSSSTPVSTVVVIPTAVCSGVRGLQYAVY 1016
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 4.9
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -2
Query: 310 FLSPNAYVSTSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITS 131
F S ++ L + STP+S P+S ++ G N + + + + T L +S S
Sbjct: 682 FTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSSGFNTTSGLPTSSVSTPLSNSSAYPS 741
Query: 130 SINLTL-YVSENISSPVI 80
S + T +S ++S +I
Sbjct: 742 SGSSTFSRLSSTLTSSII 759
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 129 DEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTD 236
DEV + +G I + +D + EE+DE D
Sbjct: 103 DEVFFSASGDATIHLSGNFLVDEEDEEEEESDEDYD 138
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 25.0 bits (52), Expect = 6.5
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Frame = +3
Query: 132 EVIYE--VTGKTVIRTQDDIHIDG---FNPSAEEA-DEGTDSNV 245
E+I E VTG +I Q+ +H+D F P+AE + +GT +
Sbjct: 501 EIIPEPNVTGNALIELQESLHLDSYGFFFPNAERSLPKGTRGRI 544
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 6.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2
Query: 256 TPVSTLESVPSSASSAEG 203
+P+S+LES+PS +S+ G
Sbjct: 151 SPISSLESLPSRSSTGSG 168
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 24.6 bits (51), Expect = 8.5
Identities = 15/71 (21%), Positives = 32/71 (45%)
Frame = +3
Query: 66 IYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTDSNV 245
I K G E ++ ++++ +DE + +T++ DD+ + + E D V
Sbjct: 21 ILKKHPAGTENITNIWQMRAMDEECRKQLAETILPLPDDVSVTDILIPTRDGTE-IDGRV 79
Query: 246 ETGVDIVLNHR 278
T V + ++R
Sbjct: 80 FTPVSVPADYR 90
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 24.6 bits (51), Expect = 8.5
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 192 DGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAFGD 305
D F PS E +E TD+ ++ V ++ V F D
Sbjct: 16 DIFFPSGSEVEESTDAPIQRTVQPIVTGSSVLALKFAD 53
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 24.6 bits (51), Expect = 8.5
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 234 DSNVETGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEE 368
+ ++E V ++LN L + Y F K++ L Y+ + V+ LE+
Sbjct: 1680 EPDLENNVKLILNLILSKDYGFLLKENLAGILLTYLNQNVSSLEK 1724
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,133,748
Number of Sequences: 5004
Number of extensions: 43877
Number of successful extensions: 160
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 200198394
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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