Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M24
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         331   1e-92
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         331   1e-92
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         331   1e-92
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          313   2e-87
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   1.3  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   1.7  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   2.2  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  331 bits (813), Expect = 1e-92
 Identities = 154/154 (100%), Positives = 154/154 (100%)
 Frame = +2

Query: 98  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 457
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 458 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 559
           TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  331 bits (813), Expect = 1e-92
 Identities = 154/154 (100%), Positives = 154/154 (100%)
 Frame = +2

Query: 98  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 457
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 458 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 559
           TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  331 bits (813), Expect = 1e-92
 Identities = 154/154 (100%), Positives = 154/154 (100%)
 Frame = +2

Query: 98  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 457
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 458 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 559
           TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  313 bits (769), Expect = 2e-87
 Identities = 142/154 (92%), Positives = 149/154 (96%)
 Frame = +2

Query: 98  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
           MCD++  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 457
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKM
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120

Query: 458 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 559
           TQIMFETF  PA+YVAIQAVLSLYASGRTTG+VL
Sbjct: 121 TQIMFETFAAPAVYVAIQAVLSLYASGRTTGVVL 154


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 23/96 (23%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
 Frame = +3

Query: 171 TTLPAPYFPRSWGDL---VTRASWSAWVRRTPT*VMRHRARGVXXXXXXXXXXXXXXXXX 341
           TT PAP    +W DL       + + W+  T T    H                      
Sbjct: 196 TTTPAPTTTTTWSDLPPPPPTTTTTVWIDPTAT-TTTHAPTTTTTWSDLPPPPPTTTTTT 254

Query: 342 IWRRSGITPSTMSCV*LPRSTQSCSPKLPSTPKPTE 449
           +W     T +T      P +T     + PSTP PT+
Sbjct: 255 VWTDPTTTTTTDYTTAYPPTTN----EPPSTPHPTD 286


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +3

Query: 105 TRKLPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWSAWVRRT 254
           T+   +WS  + P  A  + R++ L   YF  S G  + R   +AW   T
Sbjct: 196 TQSAIKWSSHLDPLFANNIERDSALSWQYFGSSTG-FLRRFPGTAWPPET 244


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 23/96 (23%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
 Frame = +3

Query: 171 TTLPAPYFPRSWGDL---VTRASWSAWVRRTPT*VMRHRARGVXXXXXXXXXXXXXXXXX 341
           TT PAP    +W DL       + + W+  T T    H                      
Sbjct: 196 TTTPAPTTTTTWSDLPPPPPTTTTTVWIDPTAT-TTTHAPTTTTTWSDQPPPPPTTTTTT 254

Query: 342 IWRRSGITPSTMSCV*LPRSTQSCSPKLPSTPKPTE 449
           +W     T +T      P +T     + PSTP PT+
Sbjct: 255 VWTDPTTTITTDYTTAYPPTTN----EPPSTPHPTD 286


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,635
Number of Sequences: 2352
Number of extensions: 14014
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)