Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M21
         (458 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL831955-1|CAD38600.1| 1033|Homo sapiens hypothetical protein pr...    30   3.3  
DQ451688-1|ABE02809.1| 1217|Homo sapiens HBV DNAPTP1-transactiva...    30   4.4  
BC111783-1|AAI11784.1| 1217|Homo sapiens chromosome 17 open read...    30   4.4  
BC110373-1|AAI10374.1|  692|Homo sapiens C17orf68 protein protein.     30   4.4  
BC026057-1|AAH26057.1|  541|Homo sapiens C17orf68 protein protein.     30   4.4  
AK025823-1|BAB15247.1|  541|Homo sapiens protein ( Homo sapiens ...    30   4.4  
AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens ...    29   5.8  
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    29   7.7  

>AL831955-1|CAD38600.1| 1033|Homo sapiens hypothetical protein
            protein.
          Length = 1033

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = -3

Query: 78   LLPLAQIH---QDKHIRRNKNIYCCF 10
            LLP A++H    +K + R+ N+YCCF
Sbjct: 928  LLPEARVHFSQLEKRVSRSHNVYCCF 953


>DQ451688-1|ABE02809.1| 1217|Homo sapiens HBV DNAPTP1-transactivated
            protein B protein.
          Length = 1217

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = -3

Query: 78   LLPLAQIH---QDKHIRRNKNIYCCF 10
            LLP A++H    +K + R+ N+YCCF
Sbjct: 961  LLPGARVHFSQLEKRVSRSHNVYCCF 986


>BC111783-1|AAI11784.1| 1217|Homo sapiens chromosome 17 open reading
            frame 68 protein.
          Length = 1217

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = -3

Query: 78   LLPLAQIH---QDKHIRRNKNIYCCF 10
            LLP A++H    +K + R+ N+YCCF
Sbjct: 961  LLPGARVHFSQLEKRVSRSHNVYCCF 986


>BC110373-1|AAI10374.1|  692|Homo sapiens C17orf68 protein protein.
          Length = 692

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = -3

Query: 78  LLPLAQIH---QDKHIRRNKNIYCCF 10
           LLP A++H    +K + R+ N+YCCF
Sbjct: 436 LLPGARVHFSQLEKRVSRSHNVYCCF 461


>BC026057-1|AAH26057.1|  541|Homo sapiens C17orf68 protein protein.
          Length = 541

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = -3

Query: 78  LLPLAQIH---QDKHIRRNKNIYCCF 10
           LLP A++H    +K + R+ N+YCCF
Sbjct: 285 LLPGARVHFSQLEKRVSRSHNVYCCF 310


>AK025823-1|BAB15247.1|  541|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22170 fis, clone HRC00652. ).
          Length = 541

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = -3

Query: 78  LLPLAQIH---QDKHIRRNKNIYCCF 10
           LLP A++H    +K + R+ N+YCCF
Sbjct: 285 LLPGARVHFSQLEKRVSRSHNVYCCF 310


>AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45698 fis, clone FEBRA2017811. ).
          Length = 415

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 119 HVHIHNKTYSTDFYYCH*HKFTKINTY 39
           H+H+H  T++    Y H H    INTY
Sbjct: 296 HIHMHMHTHTHTHTYTHAHAHIHINTY 322


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 146 FQRLFLHVIHVHIHNKTYSTDFYYCH*HKFTKINTYEEIKIFI 18
           + R+ +H+ +VHIH   Y   F Y H H +  I+ +    I++
Sbjct: 72  YTRICIHM-YVHIHAYAYICIFIYTHMHTYMYIHMHAYAYIYV 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,091,005
Number of Sequences: 237096
Number of extensions: 1345874
Number of successful extensions: 2526
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2521
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)