Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M21
         (458 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    23   2.1  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    22   2.8  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   6.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   6.4  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   6.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   6.4  

>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 25  IFISSYVFILVNL 63
           I +SSY+ ILVNL
Sbjct: 73  ILVSSYIVILVNL 85


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 201 MMVFPLNLEDFLIMFLNTIPKVVS 130
           + V  L + DFL+MF  + P V++
Sbjct: 55  LFVINLAISDFLMMFCMSPPMVIN 78


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 78  IKVCRICLVMDVNMYDVKKQPLESY 152
           +KV  ICLV+   +  V  +P ESY
Sbjct: 1   MKVSIICLVLMAAIVLVAARPDESY 25


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 27  FYFFVCVYLGEFVLMAVIKVCRICLVMDVNMYDVKKQ 137
           F+    +YL  FVL+ +       ++  + ++DV K+
Sbjct: 116 FFRMFGLYLSSFVLVCISMDRYYAVIKPLQLWDVDKR 152


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 78  IKVCRICLVMDVNMYDVKKQPLESY 152
           +KV  ICLV+   +  V  +P ESY
Sbjct: 1   MKVSIICLVLMAAIVLVAARPDESY 25


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 78  IKVCRICLVMDVNMYDVKKQPLESY 152
           +KV  ICLV+   +  V  +P ESY
Sbjct: 1   MKVSIICLVLMAAIVLVAARPDESY 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,785
Number of Sequences: 438
Number of extensions: 2664
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)