Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M20
         (430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   2.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   2.5  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   2.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   4.4  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   5.8  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   5.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.7  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 238 EYVAACRLRCHRYMCWCPPSTTLAPHAHYHRNH 140
           E +A  RLR   Y C+    + L P + + ++H
Sbjct: 34  EILANDRLRNQYYDCFIDAGSCLTPDSVFFKSH 66


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 163 VVREWYWVDTNT 198
           V+  WYW+D N+
Sbjct: 278 VMSLWYWIDRNS 289


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 238 EYVAACRLRCHRYMCWCPPSTTLAPHAHYHRNH 140
           E +A  RLR   Y C+    + L P + + ++H
Sbjct: 34  EILANDRLRNQYYDCFIDAGSCLTPDSVFFKSH 66


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 387 SMYLRTNCTSGPR 349
           S+YLR N TSG R
Sbjct: 257 SVYLRWNLTSGER 269


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 75  NLIIYFPHMIKSNNGL 28
           N ++Y  H+ K NN +
Sbjct: 91  NSVVYIEHLTKLNNAI 106


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +2

Query: 242 CCREPGDEPCLLLSVHPHHGVHVLRD 319
           CC  P +  C + + + +  V  L+D
Sbjct: 163 CCNSPENNTCSISNSYTNGCVEALKD 188


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 421 TIALISAPRLKIDVLKNELHVR 356
           TIA + +P+L I +++ E +VR
Sbjct: 893 TIACLFSPKLYIILIRPERNVR 914


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,447
Number of Sequences: 438
Number of extensions: 1974
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)