Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M19
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      24   0.88 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   2.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   2.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   8.2  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +3

Query: 357 GAHLHDGSEYDGSYADTTSVQTMRDWHRPRIQALVEAGVDMLALET 494
           G H  +   Y+G   D T+    R  +    +  VEAG D +  E+
Sbjct: 44  GYHTPESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES 89


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 258 ELAKRARSLYLEEYQDY 308
           ELA+R R L+++ Y D+
Sbjct: 530 ELARRERQLHMQLYPDW 546


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 258 ELAKRARSLYLEEYQDY 308
           ELA+R R L+++ Y D+
Sbjct: 422 ELARRERQLHMQLYPDW 438


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 218 KTKMLNKPLDGSLISICY 165
           KTK  N+P  G L  I Y
Sbjct: 177 KTKSSNRPHQGPLTPILY 194


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 19  TVASLLSCHVTWDK*LTVIPFGVRASFTHI 108
           T+  LLSC     K +  I FG  A+ T I
Sbjct: 23  TILGLLSCSFPKKKLVYCIIFGAIATLTCI 52


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 19  TVASLLSCHVTWDK*LTVIPFGVRASFTHI 108
           T+  LLSC     K +  I FG  A+ T I
Sbjct: 19  TILGLLSCSFPKKKLVYCIIFGAIATLTCI 48


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +2

Query: 149 GSGFNNN-KYLSSFRRGVY*ASWSYS 223
           G G + N  YLS   RG++   WS S
Sbjct: 197 GDGTSANFHYLSPQSRGLFHRGWSMS 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,303
Number of Sequences: 336
Number of extensions: 2236
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)