Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M19
(501 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 46 3e-06
SPBC543.08 |||phosphoinositide biosynthesis protein |Schizosacch... 26 3.7
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.4
SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces pombe... 25 8.4
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 25 8.4
SPCC576.14 |||diphthine synthase |Schizosaccharomyces pombe|chr ... 25 8.4
SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po... 25 8.4
SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 25 8.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 8.4
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 46.0 bits (104), Expect = 3e-06
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 7/171 (4%)
Frame = +3
Query: 9 VVLDGGFSTQLSCHVGQVIDGDPLWSARFLHTHPDEVVNTHLDFLIAGADLIITNTYQAS 188
++LDGG ST + + + I LW++ L +P+ VV H +FL D+I T TYQ
Sbjct: 2 LMLDGG-STAILPKLPESISESRLWTSEALVRYPEIVVKHHEEFLKV-CDIISTFTYQLD 59
Query: 189 VEGFIEHL-GLTRKESYELIVRAVELAKRARSLYLEEYQDYVQNDRVPLVVGSVGPYGAH 365
+ E + G+ K+ Y ++ L +Y E+ + N + L +GS + A
Sbjct: 60 ASIYDEKVEGVPLKQVY---ANSIGL-----PVYAREHLG-LPNKYIALCLGS---HAAT 107
Query: 366 LHDGSEYDGSYADTTSVQTMRDWHRPRIQALVEAG------VDMLALETIP 500
+ EY Y T + + ++H+ RI+A+ + +D +A E++P
Sbjct: 108 IPGCMEYKMIYDKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFESLP 158
>SPBC543.08 |||phosphoinositide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 250
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 4 RGWFWTVASLLSCHVTWDK*LTVIPF 81
RGWFWT SL+ + WD+ I F
Sbjct: 67 RGWFWT--SLVYFYHAWDQKRNKIDF 90
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1379
Score = 25.0 bits (52), Expect = 6.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 375 HHAGVLHKDQLIRPLMERDRFARSPDILLSIESVLVWL 262
HH GVL +D+ I + D++ + + L + VWL
Sbjct: 1288 HHTGVLGRDEFIVGMFLIDQYLKGRKLPLKVPD-SVWL 1324
>SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 231 SYELIVRAVELAKRARSLYLEEYQDYVQNDRVPLVVGSVG 350
S +L+ +A +EEY++ VQND L+ VG
Sbjct: 364 STDLLKKAFAYTSEVFEKIVEEYKNIVQNDFYDLMFKRVG 403
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 24.6 bits (51), Expect = 8.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +3
Query: 249 RAVELAKRARSLYLEEYQDYVQ----NDRV-PLVVGSVGP 353
R VEL + +R L+ Y +Y+Q ND + PL +GP
Sbjct: 31 RMVELRETSRRLFYHGYNNYMQFAFPNDELAPLSCEGLGP 70
>SPCC576.14 |||diphthine synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 283
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 210 LGLTRKESYELIVRAVELAKRARSLYLEEYQD--YVQNDRVPLVVG 341
+GL + ++ +R +E K+ + +YLE Y VQ +++ + G
Sbjct: 5 IGLGLFDEKDITLRGLETVKKCQRIYLEAYTSILLVQKEKLEELYG 50
>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 596
Score = 24.6 bits (51), Expect = 8.4
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +3
Query: 231 SYELIVRAVELAKRARSLYLEEYQDYVQNDRVPLVVGSVGPYGAHLHDGSEYDGSYAD 404
+Y L++ K + L L +QD V ++ L P+ A H+G Y AD
Sbjct: 175 TYGLLITLEGSNKDLKPLVLMGHQDVVPVNQASLDRWYFPPFSATYHNGHVYSRGAAD 232
>SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 862
Score = 24.6 bits (51), Expect = 8.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 333 VVGSVGPYGAHLHDGSEYDGSYA 401
V+ VG G+H+H S Y +YA
Sbjct: 74 VITIVGGNGSHIHAASVYSETYA 96
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 441 DDANRALSELK*YPHSCHRTLNHHAGVLHKDQLIRPLMER 322
++ ++ L ELK H N+ ++HKD+LI L R
Sbjct: 294 EEDSKLLEELK------HNVANYSDAIVHKDKLIEDLSTR 327
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,082,270
Number of Sequences: 5004
Number of extensions: 39802
Number of successful extensions: 114
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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