Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M19
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    23   1.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.1  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           21   7.2  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   9.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   9.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   9.5  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 444 EDDANRALSELK*YPHSCHRTLNHHAGVLHKD 349
           E DA+  + ++    H CH     H GV+H+D
Sbjct: 8   EADASHCIQQILESVHHCH-----HNGVVHRD 34


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -1

Query: 96   GSAHSKGDHRQSLVPRDMT 40
            G+++S+G  + S VPRD++
Sbjct: 1252 GTSNSRGAAQMSKVPRDVS 1270


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
 Frame = +3

Query: 114 EVVNTHLDFLIAG---ADLIITNTYQASVEGFIEHLGLTRKESYELIVRAVELAKRARSL 284
           EV    L  L+ G    D++ ++    +   +I   G  R    +L    V   K  +++
Sbjct: 37  EVSKEELTKLVQGFEEQDILTSSGVTLAGNRYIYLSGTDRVIRAKLGKVGVHCMKTTQAV 96

Query: 285 YLEEYQDYVQNDRVPLVVGSVGPY 356
            +  Y+D +Q  +   VV  +G Y
Sbjct: 97  VVSLYEDPIQPQQAASVVEKLGDY 120


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 7   GWFWTVASLLSCHV 48
           GW+ T+ S +S H+
Sbjct: 83  GWYQTLQSAISAHM 96


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 7   GWFWTVASLLSCHV 48
           GW+ T+ S +S H+
Sbjct: 83  GWYQTLQSAISAHM 96


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 7   GWFWTVASLLSCHV 48
           GW+ T+ S +S H+
Sbjct: 83  GWYQTLQSAISAHM 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,176
Number of Sequences: 438
Number of extensions: 2647
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)