Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M18
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.7  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +2

Query: 191 TLMRLPTISAGNTRSSNMASYTEVSVLERGLFC-LLATRVLWLGLGRILRSPTNTTCLPL 367
           TL     + A N          +++VLE G FC +   R L +G+ R +++    + L  
Sbjct: 527 TLSNTSLLGAANQLEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYRNIKNFNIPSILQF 586

Query: 368 N 370
           N
Sbjct: 587 N 587


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = +2

Query: 332 LRSPTNTTCLPLNFFSNSRTSLIWIFWNAFSLG 430
           L +PT T      F+   + +++W+ +    LG
Sbjct: 31  LTTPTPTDINSFYFYKTEQFTVLWVLFTMIVLG 63


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -1

Query: 446 SFMCRCP 426
           +FMCRCP
Sbjct: 165 TFMCRCP 171


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 115 VNLVFNSCLLVF 150
           VNL+FN+C  VF
Sbjct: 64  VNLIFNTCGEVF 75


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 146 FLSRCTLMSCEPSSFTLM 199
           FLSRC L+S   + +TL+
Sbjct: 679 FLSRCRLLSERLTRWTLI 696


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,932
Number of Sequences: 336
Number of extensions: 3268
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)