Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M18
(566 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20837-1|AAA03087.1| 192|Anopheles gambiae ribosomal protein S7... 290 2e-80
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 25 1.7
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 25 1.7
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 4.0
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 5.3
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 23 5.3
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 23 5.3
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 23 5.3
AY391745-1|AAR28995.1| 460|Anopheles gambiae putative GPCR prot... 23 6.9
>L20837-1|AAA03087.1| 192|Anopheles gambiae ribosomal protein S7
protein.
Length = 192
Score = 290 bits (712), Expect = 2e-80
Identities = 138/173 (79%), Positives = 155/173 (89%)
Frame = -3
Query: 564 TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 385
T I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+PK KAFQK+Q RLVR
Sbjct: 20 TQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPVPKQKAFQKVQTRLVR 79
Query: 384 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVG 205
ELEKKFSGKHVVF+ +R+ILPKP R NKQKRPRS +T+VYDAILEDLVFPAE+VG
Sbjct: 80 ELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAILEDLVFPAEVVG 139
Query: 204 KRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 46
KRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFPE YL
Sbjct: 140 KRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVTFEFPENYL 192
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 25.0 bits (52), Expect = 1.7
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = -3
Query: 264 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 94
L S Y+ ++ +V ++++ R+ +KL SQLI V+L KNQ T V+ YK
Sbjct: 35 LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 25.0 bits (52), Expect = 1.7
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = -3
Query: 264 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 94
L S Y+ ++ +V ++++ R+ +KL SQLI V+L KNQ T V+ YK
Sbjct: 35 LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.8 bits (49), Expect = 4.0
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 41 IYK*GSGNSKVTSRPVNFLYTDWKV 115
+ K G G++ + RP++ L TD+K+
Sbjct: 507 VRKKGGGDAMSSIRPISLLNTDYKL 531
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.4 bits (48), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 205 QTHQSEARWLTTHQSASRQKPTDNY 131
QTH + + ++HQ S+Q P+ +
Sbjct: 251 QTHHQQQQHPSSHQQQSQQHPSSQH 275
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.4 bits (48), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 205 QTHQSEARWLTTHQSASRQKPTDNY 131
QTH + + ++HQ S+Q P+ +
Sbjct: 251 QTHHQQQQHPSSHQQQSQQHPSSQH 275
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.4 bits (48), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 205 QTHQSEARWLTTHQSASRQKPTDNY 131
QTH + + ++HQ S+Q P+ +
Sbjct: 203 QTHHQQQQHPSSHQQQSQQHPSSQH 227
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 23.4 bits (48), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 205 QTHQSEARWLTTHQSASRQKPTDNY 131
QTH + + ++HQ S+Q P+ +
Sbjct: 251 QTHHQQQQHPSSHQQQSQQHPSSQH 275
>AY391745-1|AAR28995.1| 460|Anopheles gambiae putative GPCR
protein.
Length = 460
Score = 23.0 bits (47), Expect = 6.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 500 NCTLPRPRKLNFITKNQLSF--MCRCPN*RHSKRSKSGLSV 384
N TLP+ + N + QLSF PN R+ +S +S+
Sbjct: 239 NMTLPKRKPSNLEIRRQLSFQYFSTHPNGRNGILRRSSMSM 279
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,199
Number of Sequences: 2352
Number of extensions: 13623
Number of successful extensions: 39
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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