Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M15
         (485 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           26   0.60 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   2.4  
AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450 CY...    24   3.2  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    23   4.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   5.6  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   7.3  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 26.2 bits (55), Expect = 0.60
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 122 SLGARPITGQQGVAGTAGSIRAPL-VTQSSRPAGYKYTANMRNPPAPQPAVHIQGQEXXX 298
           S+G  P TG  G A  +GS+ A   V+   +  GY   +N ++  A  PA   Q Q    
Sbjct: 347 SMGNDPQTGMGGPASMSGSLSATSPVSPHLQQNGYVSASNGQSAQAGGPAGG-QAQPSQS 405

Query: 299 XXXXXXXXXQEQKQ 340
                    Q+Q+Q
Sbjct: 406 AAQQYQPQQQQQQQ 419


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 212 PAGYKYTANMRNPPAPQP 265
           PAG+    N + PPAP P
Sbjct: 570 PAGFPNLPNAQPPPAPPP 587


>AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450
           CYPm3r10 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 451 LTYEEAQNCQFLKAYQYFTSQIWMHSLNDWEKPFTKHL 338
           +T  E   C F+K +QYF  +   +  N+   P T HL
Sbjct: 25  ITDLELLKCVFVKDFQYFHDRGTYY--NEKHDPLTAHL 60


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 451 LTYEEAQNCQFLKAYQYFTSQIWMHSLNDWEKPFTKHL 338
           +T  E   C F+K +QYF  +   +  N+ + P + HL
Sbjct: 85  ITDLELLKCVFVKDFQYFHDRGTFY--NERDDPLSAHL 120


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 299 PLMVPGPVCELQAAELEDFAYLQCIY 222
           P +  G  C++ AA   D A L+C++
Sbjct: 367 PKLSQGHKCDVVAATFLDVAVLRCLF 392


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 10  CPTTCKTKHSNTCIGLRKYAT 72
           C   C +KH   C GL + +T
Sbjct: 52  CAGVCGSKHHTHCTGLSRDST 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,820
Number of Sequences: 2352
Number of extensions: 10635
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)