Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M15
(485 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-bindin... 72 4e-13
AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p pro... 72 4e-13
AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH... 72 4e-13
AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG... 72 4e-13
AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF... 72 4e-13
AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE... 72 4e-13
AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD... 72 4e-13
AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC... 72 4e-13
AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB... 72 4e-13
AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA... 72 4e-13
AE014134-1404|AAF52604.2| 420|Drosophila melanogaster CG8673-PA... 30 1.9
L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d... 29 3.4
BT003506-1|AAO39510.1| 570|Drosophila melanogaster RE36610p pro... 29 3.4
AE014297-2708|AAF55700.2| 539|Drosophila melanogaster CG11453-P... 29 3.4
AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA... 29 3.4
AE014297-3800|AAN14054.2| 881|Drosophila melanogaster CG31439-P... 29 4.5
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 29 4.5
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 28 5.9
AY069641-1|AAL39786.1| 625|Drosophila melanogaster LD40707p pro... 28 5.9
AE014298-1441|AAF46578.1| 625|Drosophila melanogaster CG2221-PA... 28 5.9
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 28 5.9
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 28 5.9
>L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-binding
protein protein.
Length = 632
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Frame = +2
Query: 128 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 286
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 489 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 548
Query: 287 --EXXXXXXXXXXXXQEQKQMLGERLFPVIQRMHPDLAGKI 403
E QEQKQ+LGERL+P+I+ MH +LAGKI
Sbjct: 549 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKI 589
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI+NSELLHM+E E+LKAKV+
Sbjct: 590 TGMLLEIENSELLHMIEDQEALKAKVE 616
>AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p
protein.
Length = 634
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Frame = +2
Query: 128 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 286
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 287 --EXXXXXXXXXXXXQEQKQMLGERLFPVIQRMHPDLAGKI 403
E QEQKQ+LGERL+P+I+ MH +LAGKI
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKI 591
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI+NSELLHM+E E+LKAKV+
Sbjct: 592 TGMLLEIENSELLHMIEDQEALKAKVE 618
>AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH,
isoform H protein.
Length = 634
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Frame = +2
Query: 128 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 286
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 287 --EXXXXXXXXXXXXQEQKQMLGERLFPVIQRMHPDLAGKI 403
E QEQKQ+LGERL+P+I+ MH +LAGKI
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKI 591
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI+NSELLHM+E E+LKAKV+
Sbjct: 592 TGMLLEIENSELLHMIEDQEALKAKVE 618
>AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG,
isoform G protein.
Length = 634
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Frame = +2
Query: 128 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 286
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 287 --EXXXXXXXXXXXXQEQKQMLGERLFPVIQRMHPDLAGKI 403
E QEQKQ+LGERL+P+I+ MH +LAGKI
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKI 591
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI+NSELLHM+E E+LKAKV+
Sbjct: 592 TGMLLEIENSELLHMIEDQEALKAKVE 618
>AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF,
isoform F protein.
Length = 634
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Frame = +2
Query: 128 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 286
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 287 --EXXXXXXXXXXXXQEQKQMLGERLFPVIQRMHPDLAGKI 403
E QEQKQ+LGERL+P+I+ MH +LAGKI
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKI 591
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI+NSELLHM+E E+LKAKV+
Sbjct: 592 TGMLLEIENSELLHMIEDQEALKAKVE 618
>AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE,
isoform E protein.
Length = 634
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Frame = +2
Query: 128 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 286
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 287 --EXXXXXXXXXXXXQEQKQMLGERLFPVIQRMHPDLAGKI 403
E QEQKQ+LGERL+P+I+ MH +LAGKI
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKI 591
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI+NSELLHM+E E+LKAKV+
Sbjct: 592 TGMLLEIENSELLHMIEDQEALKAKVE 618
>AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD,
isoform D protein.
Length = 634
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Frame = +2
Query: 128 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 286
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 287 --EXXXXXXXXXXXXQEQKQMLGERLFPVIQRMHPDLAGKI 403
E QEQKQ+LGERL+P+I+ MH +LAGKI
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKI 591
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI+NSELLHM+E E+LKAKV+
Sbjct: 592 TGMLLEIENSELLHMIEDQEALKAKVE 618
>AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC,
isoform C protein.
Length = 634
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Frame = +2
Query: 128 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 286
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 287 --EXXXXXXXXXXXXQEQKQMLGERLFPVIQRMHPDLAGKI 403
E QEQKQ+LGERL+P+I+ MH +LAGKI
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKI 591
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI+NSELLHM+E E+LKAKV+
Sbjct: 592 TGMLLEIENSELLHMIEDQEALKAKVE 618
>AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB,
isoform B protein.
Length = 634
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Frame = +2
Query: 128 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 286
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 287 --EXXXXXXXXXXXXQEQKQMLGERLFPVIQRMHPDLAGKI 403
E QEQKQ+LGERL+P+I+ MH +LAGKI
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKI 591
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI+NSELLHM+E E+LKAKV+
Sbjct: 592 TGMLLEIENSELLHMIEDQEALKAKVE 618
>AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA,
isoform A protein.
Length = 634
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Frame = +2
Query: 128 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 286
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 287 --EXXXXXXXXXXXXQEQKQMLGERLFPVIQRMHPDLAGKI 403
E QEQKQ+LGERL+P+I+ MH +LAGKI
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKI 591
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI+NSELLHM+E E+LKAKV+
Sbjct: 592 TGMLLEIENSELLHMIEDQEALKAKVE 618
>AE014134-1404|AAF52604.2| 420|Drosophila melanogaster CG8673-PA
protein.
Length = 420
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 478 LLPSEILHALTYEEAQNCQFLKAYQYFTSQIWMHSLN 368
LL +I+HAL Y ++ N FLK FT+ I SLN
Sbjct: 332 LLTGDIVHAL-YVQSLNTAFLKLEDVFTTGIVAESLN 367
>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic discs
protein protein.
Length = 2895
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI +LL ++ E+L+ KV+
Sbjct: 2534 TGMLLEIPTPQLLSVISSDETLRQKVN 2560
>BT003506-1|AAO39510.1| 570|Drosophila melanogaster RE36610p
protein.
Length = 570
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 355 AFPSHSKNASRF-GW*NTGMLLEIDNSELLHMLEHGESL 468
A P+ SK + GW +TG + DN LH++E E L
Sbjct: 421 ANPNESKRMQDYQGWFHTGDMGYFDNENYLHIVERKEDL 459
>AE014297-2708|AAF55700.2| 539|Drosophila melanogaster CG11453-PA
protein.
Length = 539
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 355 AFPSHSKNASRF-GW*NTGMLLEIDNSELLHMLEHGESL 468
A P+ SK + GW +TG + DN LH++E E L
Sbjct: 390 ANPNESKRMQDYQGWFHTGDMGYFDNENYLHIVERKEDL 428
>AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA
protein.
Length = 2885
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 403 TGMLLEIDNSELLHMLEHGESLKAKVD 483
TGMLLEI +LL ++ E+L+ KV+
Sbjct: 2524 TGMLLEIPTPQLLSVISSDETLRQKVN 2550
>AE014297-3800|AAN14054.2| 881|Drosophila melanogaster CG31439-PA
protein.
Length = 881
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +1
Query: 13 PTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCCWHGWINPCT 189
P KT C G+ TT P+ST ++ T C + + + TT CT
Sbjct: 114 PPCTKTTTQTPCSGIITSTTTTPASTTTTTTTCTPTTTTTTSTTTTTTTTTTTTTTTCT 172
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +1
Query: 10 CPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRC 159
CPTT T S T TT P ST ++ T C T + T T C
Sbjct: 922 CPTTT-TPRSTTTTCTSGPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSC 970
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 28.3 bits (60), Expect = 5.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 148 TTRCCWHGWINPCTSCY 198
+ +C W + NPCT CY
Sbjct: 724 SNQCPWSWYYNPCTGCY 740
>AY069641-1|AAL39786.1| 625|Drosophila melanogaster LD40707p
protein.
Length = 625
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 109 CITYFS-RSKTNHRTT-RCCWHGWINPCTSCYSKQPSSWL*IHCK 237
C+ Y S NH TT C W +N C++ ++ WL + C+
Sbjct: 422 CLGYNDCNSCINHNTTFTCLWCSVLNRCSTGTDRKKHEWLQMGCE 466
>AE014298-1441|AAF46578.1| 625|Drosophila melanogaster CG2221-PA
protein.
Length = 625
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 109 CITYFS-RSKTNHRTT-RCCWHGWINPCTSCYSKQPSSWL*IHCK 237
C+ Y S NH TT C W +N C++ ++ WL + C+
Sbjct: 422 CLGYNDCNSCINHNTTFTCLWCSVLNRCSTGTDRKKHEWLQMGCE 466
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 28.3 bits (60), Expect = 5.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 148 TTRCCWHGWINPCTSCY 198
+ +C W + NPCT CY
Sbjct: 123 SNQCPWSWYYNPCTGCY 139
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 28.3 bits (60), Expect = 5.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 148 TTRCCWHGWINPCTSCY 198
+ +C W + NPCT CY
Sbjct: 724 SNQCPWSWYYNPCTGCY 740
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,938,840
Number of Sequences: 53049
Number of extensions: 473006
Number of successful extensions: 1835
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1815
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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