Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M14
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 46 2e-05
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 43 2e-04
07_01_1086 - 9930311-9931993 43 2e-04
03_02_1029 - 13488535-13493037 41 5e-04
09_02_0555 - 10588685-10592038 41 7e-04
10_04_0010 - 7487455-7489490,7489569-7489980 40 9e-04
05_03_0216 + 10370531-10371922,10378656-10378808 38 0.004
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 38 0.006
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 37 0.011
07_01_1081 + 9831606-9832499 37 0.011
08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417 36 0.015
04_01_0192 - 2245794-2246186,2246699-2247490 36 0.015
04_01_0187 - 2153546-2154520,2154581-2155858 35 0.045
08_01_0775 - 7531397-7531564,7531590-7532771 33 0.18
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 32 0.24
01_04_0007 - 15038268-15039062,15039177-15039711,15039887-150399... 30 0.96
02_05_0739 + 31401372-31402371,31402667-31402719 30 1.3
11_01_0655 + 5294905-5296083 28 3.9
06_03_0372 - 20013078-20013533,20013969-20014062,20014247-20014422 27 6.8
06_03_0223 - 18391177-18391287,18391570-18392081,18392200-183930... 27 6.8
03_01_0035 - 322993-323280,323385-323528,324055-324180,324827-32... 27 6.8
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 27 8.9
08_02_0235 + 14627648-14628889 27 8.9
06_03_0281 - 19109567-19109691,19110479-19110615,19111274-191118... 27 8.9
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 45.6 bits (103), Expect = 2e-05
Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 9/175 (5%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMPN---------PDEQHSEAELSVCKIETRLQADRV 164
I YD +I Y G N++AD SR P E E E I + +
Sbjct: 282 IKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRHLPWELCQELEKFNLGIVNKGFVAAL 341
Query: 165 SDLPITEDCIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIILWH 344
P D ++E DP ++ + + +R G + Y ++ K + V + L H
Sbjct: 342 EAQPTLFDQVREAQVNDPDIQEIKKNMRRG-KAIGYIEDEKGTVWLGERICVPDNKELKH 400
Query: 345 SRLVIPHALRYAILKFLHSGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
+ + H Y+I HPG++ M + WW+S+ ++ YV C CQ
Sbjct: 401 TIMKEAHETLYSI-------HPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQ 448
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 42.7 bits (96), Expect = 2e-04
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 11/177 (6%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMP--NPDE-QHSEAELSVCKIETRLQADRVSD---- 170
I YD +I Y G N++AD SR N E +H EL C+ +L D VS
Sbjct: 1227 IKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRHLPWEL--CQEFEKLNLDIVSKGFVA 1284
Query: 171 ----LPITEDCIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIIL 338
P D ++E DP ++ + + +R G + Y + + + V + L
Sbjct: 1285 TLEAQPTLFDQVREAQVNDPDIQEIKKNMRRG-KAIGYVVDEQGTVWLGERICVPDNKEL 1343
Query: 339 WHSRLVIPHALRYAILKFLHSGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
+ + H Y+I HPG++ M + WW+S+ ++ YV C CQ
Sbjct: 1344 KDTIMKEAHETLYSI-------HPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQ 1393
>07_01_1086 - 9930311-9931993
Length = 560
Score = 42.7 bits (96), Expect = 2e-04
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 10/176 (5%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMPNPDEQHS-EAELSVCKIETRLQADRVSDLPITED 188
I YD I Y G N++AD SR + + L +CK RL VS
Sbjct: 10 IKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVS------- 62
Query: 189 CIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSV---ENKIILWHSRLVI 359
+ + ++ +R + EIK R+ + E+ + R+ +
Sbjct: 63 --RGFVAALEAKPTLIDQVREAQINDSDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICV 120
Query: 360 PHA--LRYAILKFLH----SGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
P L+ AILK H S HPG++ M + WW+S++ ++ YV C CQ
Sbjct: 121 PDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQ 176
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 41.1 bits (92), Expect = 5e-04
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 16/182 (8%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMPN---------PDEQHSEAELSVCKIETRLQADRV 164
I YD I Y G N++AD SR + P E + + E I R +
Sbjct: 950 IKDYDVGIHYHPGKANVVADALSRKSHCNTLNVRGIPPELNQQMEALNLNIVGRGFLAAL 1009
Query: 165 SDLPITEDCIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIILWH 344
P D I+E K DP + +++ ++ G K + + + LW+
Sbjct: 1010 EAKPTLLDQIREAQKNDPDMHGLLKNMKQG---------------KAAGFTEDEHGTLWN 1054
Query: 345 S-RLVIPHA--LRYAILKFLHSG----HPGTSAMRALARYYVWWSSIEEDVDLYVKRCSK 503
R+ +P + L+ IL+ H HPG++ M + WW S++ ++ +V C
Sbjct: 1055 GKRVCVPDSRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDV 1114
Query: 504 CQ 509
CQ
Sbjct: 1115 CQ 1116
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 40.7 bits (91), Expect = 7e-04
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMPN---------PDEQHSEAELSVCKIETRLQADRV 164
I YD I Y G N++AD SR + P E + + E I +R +
Sbjct: 567 IKDYDVGIHYHPGKANVVADALSRKSHCHTLNVRGIPPELNQQMEALNLSIVSRGFLATL 626
Query: 165 SDLPITEDCIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIILWH 344
P D I+E K DP + +++ ++ G + ++++ + L EN++ +
Sbjct: 627 EAKPTLLDQIREAQKNDPDMHGLLKIMKQG-KAAGFTED------EHGTLWNENRVCVPD 679
Query: 345 SRLVIPHALRYAILKFLHSGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
+R + L+ A + +S H G++ M + WW S++ ++ +V C CQ
Sbjct: 680 NRELKQLILQEAH-ESPYSIHSGSTKMYLNLKEKYWWVSMKREIAEFVALCDVCQ 733
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 40.3 bits (90), Expect = 9e-04
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMPN---------PDEQHSEAELSVCKIETRLQADRV 164
I YD I Y G N++AD SR + P + + + + I +R +
Sbjct: 310 IKDYDVGIHYHPGKANVVADALSRKSHCNTLEVRGIPPKLNQQIKALNLSIVSRGFLATL 369
Query: 165 SDLPITEDCIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIILWH 344
P D I+E K DP ++ +++ ++ G K + + + LW+
Sbjct: 370 EAKPTLLDQIREAQKNDPDMRGLLKNMKQG---------------KAAGFTEDEHGTLWN 414
Query: 345 -SRLVIPHA--LRYAILKFLHSG----HPGTSAMRALARYYVWWSSIEEDVDLYVKRCSK 503
+R+ +P L+ IL+ H HPG++ M + WW S++ ++ +V C
Sbjct: 415 GNRVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDV 474
Query: 504 CQ 509
CQ
Sbjct: 475 CQ 476
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 38.3 bits (85), Expect = 0.004
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 7/166 (4%)
Frame = +3
Query: 33 ITYTKGNNNIMADYFSRMPNPDEQHS-EAELSVCKIETRLQADRVSDLPITEDCIKEYTK 209
I Y G N++AD SR + + L +CK RL VS D I
Sbjct: 3 IHYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVS-----RDFIAALEA 57
Query: 210 KDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIILWHSRLVIPHA--LRYAI 383
K P L + V+ + + + + L E+ + R+ +P L+ AI
Sbjct: 58 K-PTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAI 116
Query: 384 LKFLH----SGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
LK H S HPG+ M + WW+S++ ++ YV C CQ
Sbjct: 117 LKEAHDTLYSIHPGSIKMYQDLKERFWWASMKREIAEYVAVCDVCQ 162
>04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 37.5 bits (83), Expect = 0.006
Identities = 47/181 (25%), Positives = 72/181 (39%), Gaps = 15/181 (8%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMPNPDEQHS-EAELSVCKIETRLQADRVSD------ 170
I YD I Y G N++AD SR + + L +CK RL VS
Sbjct: 889 IKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVSRGFVAAL 948
Query: 171 --LPITEDCIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIILWH 344
P D ++E DP ++ + + +R G + L E +
Sbjct: 949 EAKPTLIDQVREAQINDPDIQEIKKNMRRG--------------KAIGFLKDEQGTVWLG 994
Query: 345 SRLVIPHA--LRYAILKFLH----SGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKC 506
R+ +P L+ AILK H S HPG++ M + W +S++ ++ YV C C
Sbjct: 995 ERICVPDNKDLKDAILKKAHDTLYSIHPGSTKMYQDLKERFWCASMKREIAEYVAVCDVC 1054
Query: 507 Q 509
Q
Sbjct: 1055 Q 1055
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 36.7 bits (81), Expect = 0.011
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 18/184 (9%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMPN---------PDEQHSEAELSVCKIETRLQADRV 164
I YD I Y G N++AD SR + P E + + E I +R +
Sbjct: 144 IKDYDVGIHYHPGKANVVADALSRKSHCNTLNVRGIPPELNQQMEALNLSIVSRGFLATL 203
Query: 165 SDLPITEDCIKEYTKKDP----VLKNVVQYIRFG*REQNYS-----DEIKPYARKCSELS 317
P D I + K DP +LKN+ Q G E + + I RK L
Sbjct: 204 EAKPTLLDQICKAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRITENLRKMY-LD 262
Query: 318 VENKIILWHSRLVIPHALRYAILKFLHSGHPGTSAMRALARYYVWWSSIEEDVDLYVKRC 497
+ +IL + H Y+I HPG++ M + WW S++ ++ +V C
Sbjct: 263 ISGMLILQEA-----HESPYSI-------HPGSTKMYLDLKEKYWWVSMKREIAEFVALC 310
Query: 498 SKCQ 509
CQ
Sbjct: 311 DVCQ 314
>07_01_1081 + 9831606-9832499
Length = 297
Score = 36.7 bits (81), Expect = 0.011
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 393 LHSGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
L+S HPG++ M + WW+S+ ++ YV C CQ
Sbjct: 43 LYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQ 81
>08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417
Length = 447
Score = 36.3 bits (80), Expect = 0.015
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +3
Query: 369 LRYAILKFLH----SGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
L+ AILK H S HPG++ M + WW+S++ ++ YV C CQ
Sbjct: 112 LKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQ 162
>04_01_0192 - 2245794-2246186,2246699-2247490
Length = 394
Score = 36.3 bits (80), Expect = 0.015
Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 4/171 (2%)
Frame = +3
Query: 9 RIGSYDYDITYTKGNNNIMADYFSRMPNPDEQHSEAELSVCKIETRLQADRVSDLPITED 188
++ YDY I Y G N++AD SR+P + + + C+ T + + + D
Sbjct: 47 KLMEYDYKIEYKAGKENVVADALSRLPQTEHDNED-----CQAITVVIPEWIQD------ 95
Query: 189 CIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIILWHSRLVIPHA 368
I+ + D ++ I SD + Y+ + L + +I + S ++
Sbjct: 96 -IQNSYEGDIQAHKMLSMI------GTDSDPNRTYSLESGILRYKGRIYVGDS-----NS 143
Query: 369 LRYAILKFLHSG----HPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
+R +L+ HS H G A + +W +++ V+ Y++ C CQ
Sbjct: 144 IRTILLQDYHSSAFGRHLGIRATYQRIKGLFYWPGLKKKVENYIRECLVCQ 194
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 34.7 bits (76), Expect = 0.045
Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 15/174 (8%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMPNPDEQHS-EAELSVCKIETRLQADRVSD------ 170
I YD I Y G N++AD SR + + L +CK RL VS
Sbjct: 266 IKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVSRGFVAVL 325
Query: 171 --LPITEDCIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIILWH 344
P D ++E DP ++ + + +R G + L E +
Sbjct: 326 EAKPTLIDQVREAQINDPDIQEIKKNMRRG--------------KAIGFLEDEQGTVWLG 371
Query: 345 SRLVIPHA--LRYAILKFLH----SGHPGTSAMRALARYYVWWSSIEEDVDLYV 488
R+ +P L+ AILK H S HPG++ M + WW++++ ++ YV
Sbjct: 372 ERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWANMKREIAEYV 425
>08_01_0775 - 7531397-7531564,7531590-7532771
Length = 449
Score = 32.7 bits (71), Expect = 0.18
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 9/159 (5%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMPN---------PDEQHSEAELSVCKIETRLQADRV 164
I YD I Y G N++AD SR P E + + E I + +
Sbjct: 246 IKDYDVGIHYHPGKANVVADVLSRKSCCNTLGVRGIPPELNQQMEALNLSIVSHGFLATL 305
Query: 165 SDLPITEDCIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIILWH 344
P D I+E K DP + +++ ++ G + ++++ R + + V + L
Sbjct: 306 EAKPTLLDQIREAQKNDPDMHGILKNMKQG-KAACFTEDEHGTLRNENRVCVPDDRELKQ 364
Query: 345 SRLVIPHALRYAILKFLHSGHPGTSAMRALARYYVWWSS 461
L H Y+I HPG++ M + WWSS
Sbjct: 365 LILQEAHESPYSI-------HPGSTKMYLDLKEKYWWSS 396
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 32.3 bits (70), Expect = 0.24
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 396 HSGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
+S HPG++ M + WW S++ ++ +V C CQ
Sbjct: 746 YSIHPGSTKMYLDMKEKYWWVSMKREITEFVALCEVCQ 783
>01_04_0007 -
15038268-15039062,15039177-15039711,15039887-15039936,
15040376-15040446,15040683-15040731
Length = 499
Score = 30.3 bits (65), Expect = 0.96
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 396 HSGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
+S HPG++ M + WW ++ ++ +V C CQ
Sbjct: 116 YSIHPGSTKMYQDLKEKFWWVNMRREIAEFVALCDVCQ 153
>02_05_0739 + 31401372-31402371,31402667-31402719
Length = 350
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 417 SAMRALARYYVWWSSIEEDVDLYVKRCSKCQE 512
S + R ++W +I +D + Y+K C CQ+
Sbjct: 20 SVASKVIRQGIYWPTIMKDTEKYIKTCKACQK 51
>11_01_0655 + 5294905-5296083
Length = 392
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 12 IGSYDYDITYTKGNNNIMADYFSRMPNPD-EQHSEAELSVCKI 137
+GS+D + KGNN I+ ++ P+ E LSVC+I
Sbjct: 163 VGSFDKLLPALKGNNGILMSDLDKVVKPNIALLQECGLSVCEI 205
>06_03_0372 - 20013078-20013533,20013969-20014062,20014247-20014422
Length = 241
Score = 27.5 bits (58), Expect = 6.8
Identities = 7/22 (31%), Positives = 17/22 (77%)
Frame = +3
Query: 450 WWSSIEEDVDLYVKRCSKCQEN 515
+W ++ ED +++RC++CQ++
Sbjct: 69 FWPTMYEDTKEFIQRCARCQKH 90
>06_03_0223 -
18391177-18391287,18391570-18392081,18392200-18393019,
18393603-18393671,18393973-18394062,18395381-18395575
Length = 598
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 396 HSGHPGTSAMRALARYY---VWWSSIEEDVDLYVKRCSKCQEN 515
+ GH G A R A+ + +W ++ +D +V+RC+ CQ++
Sbjct: 270 YGGHYG--AFRTHAKIWQSGFFWPTMYDDTKEFVRRCTSCQKH 310
>03_01_0035 -
322993-323280,323385-323528,324055-324180,324827-324882,
325497-325517,327153-327420,327904-329787
Length = 928
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 90 NPDEQHSEAELSVCKIETRLQADRVSDLPITEDCIK 197
N + QH+ LS ++ L+ D + +P+ E C+K
Sbjct: 345 NGERQHTTNALSPAHLQAVLKLDTKNGIPVFEFCVK 380
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 396 HSGHPGTSAMRALARYYVWWSSIEEDVDLYVKRCSKCQ 509
+S HPG++ M + WW S+ ++ +V C Q
Sbjct: 202 YSIHPGSTKMYQDLKEKFWWISMRREIAEFVALCDVYQ 239
>08_02_0235 + 14627648-14628889
Length = 413
Score = 27.1 bits (57), Expect = 8.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 450 WWSSIEEDVDLYVKRCSKCQ 509
WW+S++ ++ YV C CQ
Sbjct: 10 WWASMKREIAEYVAVCDVCQ 29
>06_03_0281 -
19109567-19109691,19110479-19110615,19111274-19111828,
19112784-19112989
Length = 340
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 186 DCIKEYTKKDPVLKNVVQYIRFG*REQNYSDEIKPYARKCSELSVENKIILW 341
DCI+E D +NVVQ + +D Y + C L E+K I+W
Sbjct: 172 DCIREVVVNDIGAENVVQLV---------TDNGSNYKKACKTLIQEHKHIVW 214
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,463,943
Number of Sequences: 37544
Number of extensions: 227950
Number of successful extensions: 695
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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