Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M13
         (552 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128780-1|BAC87609.1|  259|Homo sapiens protein ( Homo sapiens ...    30   4.7  
AF132948-1|AAD27723.1|  404|Homo sapiens CGI-14 protein protein.       30   4.7  

>AK128780-1|BAC87609.1|  259|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45445 fis, clone BRSSN2013696. ).
          Length = 259

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 229 LRTHGPARNAVTPPRRCEPALTRCGGKRSLAPCAQRY 339
           L + GP +  + PPRR   A +  GG+R L P   R+
Sbjct: 89  LASQGPLQAQLLPPRRPPGARSLLGGRRGLGPGRSRW 125


>AF132948-1|AAD27723.1|  404|Homo sapiens CGI-14 protein protein.
          Length = 404

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 222 ITAADAWSCEECGHAAKKMRAGADPVW 302
           + A  AW C   GH+   +RA  D VW
Sbjct: 194 LRALTAWICVSLGHSVADLRAAEDAVW 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,439,277
Number of Sequences: 237096
Number of extensions: 1035219
Number of successful extensions: 5415
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5391
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)