Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M13
         (552 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   1.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   3.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   8.3  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -1

Query: 378 GTSRPERKRTPRPVSLRTRSKRPLPPTPGQRR 283
           G +RP     PRP   R R +  L   PG  R
Sbjct: 70  GNNRPVYIPQPRPPHPRLRREAELEAEPGNNR 101



 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -1

Query: 378 GTSRPERKRTPRPVSLRTRSKRPLPPTPGQRR 283
           G +RP     PRP   R R +  L   PG  R
Sbjct: 126 GNNRPVYIPQPRPPHPRLRREAELEAEPGNNR 157



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = -1

Query: 378 GTSRPERKRTPRPVSLRTRSKRPLPPTPGQRR 283
           G +RP     PRP   R R +      PG  R
Sbjct: 98  GNNRPVYISQPRPPHPRLRREAEPEAEPGNNR 129



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = -1

Query: 378 GTSRPERKRTPRPVSLRTRSKRPLPPTPGQRR 283
           G +RP     PRP   R R +      PG  R
Sbjct: 154 GNNRPVYISQPRPPHPRLRREAEPEAEPGNNR 185


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 187 NGNRSRSPASSRSGQRCS 134
           NG+ + SP S  S  RCS
Sbjct: 316 NGSNNGSPRSPESNSRCS 333


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = -2

Query: 182 EPQPQPGVFEIGTTLLCGQVEAAVVDRPSRAILEILLGDGPDVHAPRVAAPLLDR 18
           EP   P  F +  TLL       +V R +     +L   G +V A R  A  + R
Sbjct: 697 EPSAVPSKFCLSVTLLTVATSLVIVSRYAEKSRRMLYLRGREVVAQRERAADMKR 751


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = -2

Query: 167 PGVFEIGTTLLCGQVEAAVVDRPSRAILEILLGDGPDVHAPRVAAPL 27
           PG+   G  L C +VEAA   R    +   L+G       P    PL
Sbjct: 380 PGLDSDGIRLPCREVEAAATAR--NVVAPFLIGSRRTSPPPEDWKPL 424


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 107 DRPSRAILEILLGDGPDVHAPRVAAP 30
           D+P +A + I +G   D H   +  P
Sbjct: 509 DKPMKAAIRIFIGPKYDSHHKLIEIP 534


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 107 DRPSRAILEILLGDGPDVHAPRVAAP 30
           D+P +A + I +G   D H   +  P
Sbjct: 509 DKPMKAAIRIFIGPKYDSHHKLIEIP 534


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,903
Number of Sequences: 438
Number of extensions: 1638
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)