Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M12
         (525 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical pr...   160   5e-40
AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical ...    54   8e-08
Z81071-3|CAB03013.1|   91|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z69302-4|CAA93263.1|  125|Caenorhabditis elegans Hypothetical pr...    31   0.67 
AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical ...    29   2.0  
U39472-1|AAK31395.1|  534|Caenorhabditis elegans Cytochrome p450...    29   2.7  
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z68114-11|CAA92154.1|  329|Caenorhabditis elegans Hypothetical p...    27   8.2  

>Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical
           protein C52E4.3 protein.
          Length = 118

 Score =  160 bits (389), Expect = 5e-40
 Identities = 79/117 (67%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
 Frame = +1

Query: 46  MATTTKPRSXXXXXXXXXXXXXXFSTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD 225
           M+   KPRS              F+ GPLS+LT SVKNN QVLINCRNNKKLLGRVKAFD
Sbjct: 1   MSAQAKPRSEMTAEELAAKEDEEFNVGPLSILTNSVKNNHQVLINCRNNKKLLGRVKAFD 60

Query: 226 RHCNMVLENVKEMWTEVPRT-XXXXXXXAVNKDKFISKMFLRGDSVILVLRNPLATA 393
           RHCNMVLENVKEMWTEVP+T        +V KD+FISKMFLRGDSVILV++NPLA A
Sbjct: 61  RHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVVKNPLAQA 117


>AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical
           protein Y62E10A.12 protein.
          Length = 102

 Score = 53.6 bits (123), Expect = 8e-08
 Identities = 30/81 (37%), Positives = 46/81 (56%)
 Frame = +1

Query: 127 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPRTXXXXXXX 306
           PL +L  S+  + +V +  RN+++L GR++AFD+H NMVL  V+E  T            
Sbjct: 17  PLDLLRLSL--DERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETITTREVDEDTFEEI 74

Query: 307 AVNKDKFISKMFLRGDSVILV 369
                + +  +F+RGDSVILV
Sbjct: 75  YKQTKRVVPMLFVRGDSVILV 95


>Z81071-3|CAB03013.1|   91|Caenorhabditis elegans Hypothetical
           protein F28F8.3 protein.
          Length = 91

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 15/45 (33%), Positives = 30/45 (66%)
 Frame = +1

Query: 127 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 261
           PL ++ + + +   V++  +N+K+++G +  FD + NMVLE+V E
Sbjct: 14  PLELIDKCIGSKIWVIM--KNDKEIVGTLTGFDDYVNMVLEDVVE 56


>Z69302-4|CAA93263.1|  125|Caenorhabditis elegans Hypothetical
           protein F40F8.9 protein.
          Length = 125

 Score = 30.7 bits (66), Expect = 0.67
 Identities = 15/46 (32%), Positives = 30/46 (65%)
 Frame = +1

Query: 124 GPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 261
           G +S+  Q  K   ++L+  R+ +KL+G +++ D+  N++LE+V E
Sbjct: 10  GAISLFEQLDK---KLLVVLRDGRKLIGFLRSIDQFANLILEDVVE 52


>AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical
           protein Y92H12A.5 protein.
          Length = 1375

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 200 CWVVSKHSTGIATWFLKMLKKCG 268
           CW   KH +GI  W ++ML   G
Sbjct: 692 CWRAHKHVSGIFAWIIEMLAPLG 714


>U39472-1|AAK31395.1|  534|Caenorhabditis elegans Cytochrome p450
           family protein 23A1 protein.
          Length = 534

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 257 LTFSRTMLQCRSNALTRPNSFLLFLQLIKTCVLFLTD*VSTER 129
           L FS    QC   +L R   +L+F  LI+     + D V+TER
Sbjct: 464 LPFSIGRRQCLGESLARAELYLVFANLIQNFNFEVADDVTTER 506


>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
           protein Y70C5A.2 protein.
          Length = 1037

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 213 DTTQQFLVIPTVDQDLCVIFNRLSEYRKGARA 118
           D +Q  LV+P VDQ++   F   S Y++G ++
Sbjct: 470 DASQVLLVLPLVDQNILKFFVISSIYKQGKKS 501


>Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical
           protein W08E3.1 protein.
          Length = 160

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +1

Query: 160 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 261
           N ++ I  ++ +  +G  KAFD+H N++L   +E
Sbjct: 14  NYRMKIILQDGRTFIGFFKAFDKHMNILLAECEE 47


>Z68114-11|CAA92154.1|  329|Caenorhabditis elegans Hypothetical
           protein F17A2.5 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +1

Query: 193 KKLLGRVKAFDRHCNMVLENVKEMWTEVPRTXXXXXXXAVNKDKFISKMFLRGDSVILVL 372
           ++L    KAFD+HC    E V+++   + +          + +KF++KM  + + V  VL
Sbjct: 113 RELENETKAFDKHCKKWCEYVEDV---LQQQGEFRPITQQSTEKFMNKMSGKFNKVCFVL 169

Query: 373 R 375
           +
Sbjct: 170 K 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,145,028
Number of Sequences: 27780
Number of extensions: 214867
Number of successful extensions: 515
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)