Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M09
(540 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 42 3e-04
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 40 9e-04
AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 40 0.001
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 39 0.003
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 39 0.003
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 39 0.003
Z92834-10|CAB07393.1| 439|Caenorhabditis elegans Hypothetical p... 37 0.011
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 34 0.057
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 33 0.17
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 33 0.17
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 33 0.17
Z70780-2|CAA94821.1| 468|Caenorhabditis elegans Hypothetical pr... 32 0.23
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 31 0.53
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 31 0.53
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF490975-1|AAQ06433.1| 703|Caenorhabditis elegans ABC7 protein ... 29 2.8
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 28 3.7
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 28 3.7
U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alph... 27 6.5
U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alph... 27 6.5
AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeri... 27 6.5
>Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 57.6 bits (133), Expect = 5e-09
Identities = 31/91 (34%), Positives = 51/91 (56%)
Frame = +2
Query: 164 IKRLSFKTSCNKLVLFSSQPDQAYEKKLGKIVNVAIIGAPNSGKSTLINNITKRKACAAS 343
IKRL+F S+ ++ + K + +A+IGAPN GKS L N++ + A S
Sbjct: 3 IKRLNFSCRLFSTASTSTSYEKTPIQPATKCLQLAVIGAPNVGKSLLTNSLIRCPLSAVS 62
Query: 344 NKVHTTIKLIRAMCYHNETQIIXLDTPGIVT 436
+K+ TT + I A + TQ++ +D+PG V+
Sbjct: 63 SKMDTTTRNISASICSDSTQLVFVDSPGAVS 93
>Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 57.6 bits (133), Expect = 5e-09
Identities = 31/91 (34%), Positives = 51/91 (56%)
Frame = +2
Query: 164 IKRLSFKTSCNKLVLFSSQPDQAYEKKLGKIVNVAIIGAPNSGKSTLINNITKRKACAAS 343
IKRL+F S+ ++ + K + +A+IGAPN GKS L N++ + A S
Sbjct: 3 IKRLNFSCRLFSTASTSTSYEKTPIQPATKCLQLAVIGAPNVGKSLLTNSLIRCPLSAVS 62
Query: 344 NKVHTTIKLIRAMCYHNETQIIXLDTPGIVT 436
+K+ TT + I A + TQ++ +D+PG V+
Sbjct: 63 SKMDTTTRNISASICSDSTQLVFVDSPGAVS 93
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +2
Query: 239 KKLGKIVNVAIIGAPNSGKSTLINNITKRKACAASNKVHTTIKLIRAMCYHNETQIIXLD 418
K + + V ++G PN GKS++IN++ +RKAC N T K I+ + + I +D
Sbjct: 254 KDIKTSIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGIT-KEIQEV--ELDKNIRLID 310
Query: 419 TPGIV 433
+PG++
Sbjct: 311 SPGVI 315
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +2
Query: 263 VAIIGAPNSGKSTLINNITKRKACAASNKVHTTIKLIRAMCYHNETQIIXLDTPGIVTNR 442
VA++G P+ GKSTL++++T + AA + TT+ I + +N I LD PGI+
Sbjct: 65 VAMVGFPSVGKSTLLSSMTSTHSEAAGYEF-TTLTCIPGVISYNGANIQLLDLPGIIEGA 123
Query: 443 DEKK 454
+ K
Sbjct: 124 SQGK 127
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 40.3 bits (90), Expect = 9e-04
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +2
Query: 233 YEKKLGKIVNVAIIGAPNSGKSTLINNITKRKACAASNKVHTTIKLIRAMCYHNETQIIX 412
Y+ ++ + ++G PN+GKS+L+ I++ K AS T I + Y + QI
Sbjct: 181 YDVEMRVMATAGLVGFPNAGKSSLLRAISRAKPKVASYPFTTLHPHIGVVFYEDFEQIAV 240
Query: 413 LDTPGIV 433
D PG++
Sbjct: 241 ADIPGLI 247
>AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical
protein Y67D2.4 protein.
Length = 313
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Frame = +2
Query: 152 FLSCIKRLSFKTSCNKLVLFSS-QPDQAYEKKLGKIVNVAIIGAPNSGKSTLINNI---- 316
F C KRL + KL + + + + + + ++G PN GKS+LIN I
Sbjct: 80 FTDCKKRLPRALNDVKLSMLDALENTPRFNRTVKTEYQAMVVGIPNVGKSSLINAIRTHT 139
Query: 317 --TKRKACAASNKVHTTIKLIRAMCYHNETQIIXLDTPGIVT 436
KRKA A + T+++ + ++ + +DTPG+++
Sbjct: 140 LGIKRKAVEAGARPGVTVRVQNRVRILDKPPVYIIDTPGVLS 181
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +2
Query: 257 VNVAIIGAPNSGKSTLINNITKRKAC-----AASNKVHTTIKLIRAMCYHNETQIIXLDT 421
++V IG PN GKS+L+N + K+K C A KV + L+R +I +D+
Sbjct: 326 ISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMR--------RIYLIDS 377
Query: 422 PGIV 433
PG+V
Sbjct: 378 PGVV 381
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +2
Query: 257 VNVAIIGAPNSGKSTLINNITKRKAC-----AASNKVHTTIKLIRAMCYHNETQIIXLDT 421
++V IG PN GKS+L+N + K+K C A KV + L+R +I +D+
Sbjct: 267 ISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMR--------RIYLIDS 318
Query: 422 PGIV 433
PG+V
Sbjct: 319 PGVV 322
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +2
Query: 257 VNVAIIGAPNSGKSTLINNITKRKAC-----AASNKVHTTIKLIRAMCYHNETQIIXLDT 421
++V IG PN GKS+L+N + K+K C A KV + L+R +I +D+
Sbjct: 326 ISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMR--------RIYLIDS 377
Query: 422 PGIV 433
PG+V
Sbjct: 378 PGVV 381
>Z92834-10|CAB07393.1| 439|Caenorhabditis elegans Hypothetical
protein F39B2.7 protein.
Length = 439
Score = 36.7 bits (81), Expect = 0.011
Identities = 22/92 (23%), Positives = 42/92 (45%)
Frame = +2
Query: 257 VNVAIIGAPNSGKSTLINNITKRKACAASNKVHTTIKLIRAMCYHNETQIIXLDTPGIVT 436
+++ + G PNSGKS+++N + S+ TT + + N + DT G+
Sbjct: 211 LDIVLYGRPNSGKSSILNQLAHDDVAIVSSIPGTTRDSLETIIQINGVRCRLTDTAGV-- 268
Query: 437 NRDEKKYNLPQSMVEACYKSLRCADVVGVVHD 532
R + + + K ++ AD++ VV D
Sbjct: 269 -RQKTNDVIEAEGIRRAQKRIQSADIICVVVD 299
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 34.3 bits (75), Expect = 0.057
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 242 KLGKIVNVAIIGAPNSGKSTLINNITKRKACA 337
+LG + V I+G PN GKST N +TK +A A
Sbjct: 17 RLGTNLKVGILGLPNVGKSTFFNVLTKSEAQA 48
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 32.7 bits (71), Expect = 0.17
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 221 PDQAYEKKLGKIVNVAIIGAPNSGKSTLINNITKRKACAASNKVHTTIKLIRAMCYHNET 400
P + ++ + +G P+ GKSTL+ N+ + A+ + TT+ + + +
Sbjct: 51 PGEGFDVAKTGDARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEF-TTLTTVPGVIRYKGA 109
Query: 401 QIIXLDTPGIVTNRDEKKYNLPQ--SMVEACYKSLRCADVV 517
+I LD PGI+ + K Q ++ C L DV+
Sbjct: 110 KIQLLDLPGIIEGAKDGKGRGKQVIAVARTCSLILMVLDVM 150
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 260 NVAIIGAPNSGKSTLINNITKRKACAASNKVHTTI 364
N+ ++G PN+GKSTL+ + K+ ++ TT+
Sbjct: 163 NIGLLGFPNAGKSTLLKALVPEKSVKIADYAFTTV 197
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 32.7 bits (71), Expect = 0.17
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 221 PDQAYEKKLGKIVNVAIIGAPNSGKSTLINNITKRKACAASNKVHTTIKLIRAMCYHNET 400
P + ++ + +G P+ GKSTL+ N+ + A+ + TT+ + + +
Sbjct: 51 PGEGFDVAKTGDARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEF-TTLTTVPGVIRYKGA 109
Query: 401 QIIXLDTPGIVTNRDEKKYNLPQ--SMVEACYKSLRCADVV 517
+I LD PGI+ + K Q ++ C L DV+
Sbjct: 110 KIQLLDLPGIIEGAKDGKGRGKQVIAVARTCSLILMVLDVM 150
>Z70780-2|CAA94821.1| 468|Caenorhabditis elegans Hypothetical
protein F46B6.4 protein.
Length = 468
Score = 32.3 bits (70), Expect = 0.23
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +2
Query: 263 VAIIGAPNSGKSTLINNITKRKACAASNKVHTTIKLIRAMC-YHNETQIIXLDTPGIVTN 439
VA++G NSGK++L+ +T + +++ T+ R + + + DT G ++
Sbjct: 237 VAVVGYTNSGKTSLVKKLTGAASLTPKDQLFATLDTTRHLAKLPSGRSAVFTDTIGFLS- 295
Query: 440 RDEKKYNLPQSMV---EACYKSLRCADVVGVVHDIS 538
+LP ++ EA ++ ADV+ + DIS
Sbjct: 296 ------DLPMHLIAAFEATLAHVKSADVIIHLRDIS 325
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 31.1 bits (67), Expect = 0.53
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +2
Query: 269 IIGAPNSGKSTLINNITKRKACAASNKVHTTIKLIRAMCYHNETQIIXLDTPGIVTNRDE 448
+ G PN GKS+ INN+T R TT L + + +DTPGI+ E
Sbjct: 174 LCGFPNVGKSSFINNVT-RADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQPLE 232
Query: 449 KKYNLPQSMVEA 484
+ + V A
Sbjct: 233 DRNTIEMQAVTA 244
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 31.1 bits (67), Expect = 0.53
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +2
Query: 269 IIGAPNSGKSTLINNITKRKACAASNKVHTTIKLIRAMCYHNETQIIXLDTPGIVTNRDE 448
+ G PN GKS+ INN+T R TT L + + +DTPGI+ E
Sbjct: 174 LCGFPNVGKSSFINNVT-RADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQPLE 232
Query: 449 KKYNLPQSMVEA 484
+ + V A
Sbjct: 233 DRNTIEMQAVTA 244
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 251 KIVNVAIIGAPNSGKSTLINNI 316
K VN+ ++G NSGK+T++N +
Sbjct: 16 KDVNIVVVGLDNSGKTTILNQL 37
>Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical
protein Y48E1B.2a protein.
Length = 890
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 242 KLGKIVNVAIIGAPNSGKSTLINNITKRKAC 334
KLG ++ ++G N+GKST+ N + + C
Sbjct: 500 KLGMRGDIFLVGCTNAGKSTMFNALLQSDLC 530
>AF490975-1|AAQ06433.1| 703|Caenorhabditis elegans ABC7 protein
protein.
Length = 703
Score = 28.7 bits (61), Expect = 2.8
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +2
Query: 263 VAIIGAPNSGKSTLINNITKRKACAASNKVHTTIKLIRAMCYHNETQIIXLDTPGIVTNR 442
VAI+G SGKST++ + R S V R + + Q I + V
Sbjct: 463 VAIVGGSGSGKSTIV-RLLYRLYDTESGNVRINGLETRDLTLDSLRQSISIVPQDSVLFH 521
Query: 443 DEKKYNL----PQSMVEACYKSLRCADV 514
D YNL P + +E Y++ + AD+
Sbjct: 522 DTIFYNLAYGRPSASMEEVYQAAKLADL 549
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 293 KSTLINNITKRKACAASNKVHTTIKLIRAMCYHNETQIIXLDTPGIVTNRDEKKYNLP 466
++ L N T R+A A +++ YH ET+ I DT R+E + N P
Sbjct: 250 RTILPNRRTARRA-GAGEHFQNVVQIETPRAYHRETEEIIDDTASYGDLRNESRMNSP 306
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 266 AIIGAPNSGKSTLINNITKR 325
AIIG +GK+TL+N +TKR
Sbjct: 96 AIIGPSGAGKTTLLNVLTKR 115
>U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform a protein.
Length = 368
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 218 QPDQAYEKKL-GKIVNVAIIGAPNSGKSTLINNI 316
+ + A EKK G + + I+G P SGKST+ +
Sbjct: 19 EKELALEKKTYGSHIKILILGGPLSGKSTIFKQM 52
>U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform b protein.
Length = 408
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 218 QPDQAYEKKL-GKIVNVAIIGAPNSGKSTLINNI 316
+ + A EKK G + + I+G P SGKST+ +
Sbjct: 59 EKELALEKKTYGSHIKILILGGPLSGKSTIFKQM 92
>AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 368
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 218 QPDQAYEKKL-GKIVNVAIIGAPNSGKSTLINNI 316
+ + A EKK G + + I+G P SGKST+ +
Sbjct: 19 EKELALEKKTYGSHIKILILGGPLSGKSTIFKQM 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,434,785
Number of Sequences: 27780
Number of extensions: 247795
Number of successful extensions: 806
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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