Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M07
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   298   1e-82
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.9  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   4.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   5.9  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   5.9  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   5.9  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   5.9  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  298 bits (731), Expect = 1e-82
 Identities = 141/178 (79%), Positives = 158/178 (88%)
 Frame = -1

Query: 615 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNSKSIIIYVPMPKLKAFQKIQ 436
           PD FET I QA++ELE NSDLK QLR+LYIT+A+E+E +N K+IIIYVP+PK KAFQK+Q
Sbjct: 15  PDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPVPKQKAFQKVQ 74

Query: 435 IRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
            RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VYDAILEDLVFP
Sbjct: 75  TRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAILEDLVFP 134

Query: 255 AEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 82
           AE+VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFPE YL
Sbjct: 135 AEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVTFEFPENYL 192


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -1

Query: 300 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 130
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -1

Query: 300 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 130
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 77  IYK*GSGNSKVTSRPVNFLYTDWKV 151
           + K G G++  + RP++ L TD+K+
Sbjct: 507 VRKKGGGDAMSSIRPISLLNTDYKL 531


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 241 QTHQSEARWLTTHQSASRQKPTDNY 167
           QTH  + +  ++HQ  S+Q P+  +
Sbjct: 251 QTHHQQQQHPSSHQQQSQQHPSSQH 275


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 241 QTHQSEARWLTTHQSASRQKPTDNY 167
           QTH  + +  ++HQ  S+Q P+  +
Sbjct: 251 QTHHQQQQHPSSHQQQSQQHPSSQH 275


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 241 QTHQSEARWLTTHQSASRQKPTDNY 167
           QTH  + +  ++HQ  S+Q P+  +
Sbjct: 203 QTHHQQQQHPSSHQQQSQQHPSSQH 227


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 241 QTHQSEARWLTTHQSASRQKPTDNY 167
           QTH  + +  ++HQ  S+Q P+  +
Sbjct: 251 QTHHQQQQHPSSHQQQSQQHPSSQH 275


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,201
Number of Sequences: 2352
Number of extensions: 13455
Number of successful extensions: 38
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)