Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M07
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 280 3e-75
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 280 3e-75
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 280 3e-75
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 280 3e-75
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 280 3e-75
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 280 3e-75
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 5e-19
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 1.8
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 31 4.3
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 31 4.3
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 31 4.3
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 31 4.3
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 31 4.3
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 31 4.3
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 31 4.3
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 31 4.3
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 31 4.3
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 31 4.3
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 30 5.6
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 30 5.6
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 7.5
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 7.5
BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 30 7.5
BC068580-1|AAH68580.1| 738|Homo sapiens MGC24039 protein protein. 30 7.5
BC020855-1|AAH20855.1| 507|Homo sapiens MGC24039 protein protein. 30 7.5
BC012079-1|AAH12079.1| 888|Homo sapiens molybdenum cofactor sul... 30 7.5
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 7.5
AK222886-1|BAD96606.1| 888|Homo sapiens molybdenum cofactor sul... 30 7.5
AK125323-1|BAC86129.1| 1309|Homo sapiens protein ( Homo sapiens ... 30 7.5
AK000740-1|BAA91353.1| 888|Homo sapiens protein ( Homo sapiens ... 30 7.5
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 7.5
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 29 9.9
U32178-1|AAB02179.1| 369|Homo sapiens deoxyhypusine synthase pr... 29 9.9
U26266-1|AAB02175.1| 321|Homo sapiens deoxyhypusine synthase pr... 29 9.9
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 29 9.9
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 29 9.9
AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 29 9.9
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 29 9.9
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 280 bits (686), Expect = 3e-75
Identities = 135/176 (76%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
Frame = -1
Query: 615 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNS-KSIIIYVPMPKLKAFQKI 439
PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ K+III+VP+P+LK+FQKI
Sbjct: 16 PDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKI 75
Query: 438 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 259
Q+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVF
Sbjct: 76 QVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVF 135
Query: 258 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 91
P+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 136 PSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 280 bits (686), Expect = 3e-75
Identities = 135/176 (76%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
Frame = -1
Query: 615 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNS-KSIIIYVPMPKLKAFQKI 439
PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ K+III+VP+P+LK+FQKI
Sbjct: 14 PDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKI 73
Query: 438 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 259
Q+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVF
Sbjct: 74 QVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVF 133
Query: 258 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 91
P+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 134 PSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 280 bits (686), Expect = 3e-75
Identities = 135/176 (76%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
Frame = -1
Query: 615 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNS-KSIIIYVPMPKLKAFQKI 439
PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ K+III+VP+P+LK+FQKI
Sbjct: 16 PDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKI 75
Query: 438 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 259
Q+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVF
Sbjct: 76 QVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVF 135
Query: 258 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 91
P+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 136 PSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 280 bits (686), Expect = 3e-75
Identities = 135/176 (76%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
Frame = -1
Query: 615 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNS-KSIIIYVPMPKLKAFQKI 439
PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ K+III+VP+P+LK+FQKI
Sbjct: 16 PDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKI 75
Query: 438 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 259
Q+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVF
Sbjct: 76 QVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVF 135
Query: 258 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 91
P+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 136 PSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 280 bits (686), Expect = 3e-75
Identities = 135/176 (76%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
Frame = -1
Query: 615 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNS-KSIIIYVPMPKLKAFQKI 439
PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ K+III+VP+P+LK+FQKI
Sbjct: 16 PDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKI 75
Query: 438 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 259
Q+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVF
Sbjct: 76 QVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVF 135
Query: 258 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 91
P+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 136 PSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 280 bits (686), Expect = 3e-75
Identities = 135/176 (76%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
Frame = -1
Query: 615 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNS-KSIIIYVPMPKLKAFQKI 439
PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ K+III+VP+P+LK+FQKI
Sbjct: 16 PDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKI 75
Query: 438 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 259
Q+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVF
Sbjct: 76 QVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVF 135
Query: 258 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 91
P+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 136 PSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 5e-19
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -1
Query: 309 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 154
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 137 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMASYTEVSVLERG 316
T W ++ LCS++ W L CT + P L+ L T+S+ +S A +L++
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD 322
Query: 317 L 319
L
Sbjct: 323 L 323
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.3
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -1
Query: 552 KAQLRELYITKAKEIELHNSKSIIIY-VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 376
K + +I L SK+++ V MPK K + K+ + +R +KK G +
Sbjct: 732 KLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 375 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.3
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -1
Query: 552 KAQLRELYITKAKEIELHNSKSIIIY-VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 376
K + +I L SK+++ V MPK K + K+ + +R +KK G +
Sbjct: 732 KLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 375 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.3
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -1
Query: 552 KAQLRELYITKAKEIELHNSKSIIIY-VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 376
K + +I L SK+++ V MPK K + K+ + +R +KK G +
Sbjct: 732 KLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 375 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.3
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -1
Query: 552 KAQLRELYITKAKEIELHNSKSIIIY-VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 376
K + +I L SK+++ V MPK K + K+ + +R +KK G +
Sbjct: 732 KLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 375 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.3
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -1
Query: 552 KAQLRELYITKAKEIELHNSKSIIIY-VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 376
K + +I L SK+++ V MPK K + K+ + +R +KK G +
Sbjct: 732 KLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 375 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.3
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -1
Query: 552 KAQLRELYITKAKEIELHNSKSIIIY-VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 376
K + +I L SK+++ V MPK K + K+ + +R +KK G +
Sbjct: 732 KLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 375 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 30.7 bits (66), Expect = 4.3
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -1
Query: 552 KAQLRELYITKAKEIELHNSKSIIIY-VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 376
K + +I L SK+++ V MPK K + K+ + +R +KK G +
Sbjct: 732 KLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 375 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 30.7 bits (66), Expect = 4.3
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -1
Query: 552 KAQLRELYITKAKEIELHNSKSIIIY-VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 376
K + +I L SK+++ V MPK K + K+ + +R +KK G +
Sbjct: 732 KLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 375 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.3
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -1
Query: 552 KAQLRELYITKAKEIELHNSKSIIIY-VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 376
K + +I L SK+++ V MPK K + K+ + +R +KK G +
Sbjct: 732 KLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 375 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.3
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -1
Query: 552 KAQLRELYITKAKEIELHNSKSIIIY-VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 376
K + +I L SK+++ V MPK K + K+ + +R +KK G +
Sbjct: 732 KLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 375 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 256
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 30.3 bits (65), Expect = 5.6
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = -1
Query: 603 ETSISQALVELETNSDLKAQLRELYITKAKEIELHNSKSIIIYVPMPKLKAFQK--IQIR 430
+ + +A +EL + DLK + +E+ + + + EL +S++ ++PM + QK +Q
Sbjct: 1450 QREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQRE 1508
Query: 429 LVRELEK 409
+RELEK
Sbjct: 1509 QIRELEK 1515
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 30.3 bits (65), Expect = 5.6
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = -1
Query: 603 ETSISQALVELETNSDLKAQLRELYITKAKEIELHNSKSIIIYVPMPKLKAFQK--IQIR 430
+ + +A +EL + DLK + +E+ + + + EL +S++ ++PM + QK +Q
Sbjct: 1450 QREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQRE 1508
Query: 429 LVRELEK 409
+RELEK
Sbjct: 1509 QIRELEK 1515
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 213 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 130
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 213 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 130
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein.
Length = 648
Score = 29.9 bits (64), Expect = 7.5
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -1
Query: 579 VELETNSDLKAQLRELYITKAKEI-ELHNSKSIIIYVPMPKLKAFQKIQIRLVRELEKK 406
VE ET S K Q +++ + KE+ E+HN + + M + QK Q R + ELEKK
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKK 645
>BC068580-1|AAH68580.1| 738|Homo sapiens MGC24039 protein protein.
Length = 738
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 597 SISQALVELETNSDLKAQLRELYITKAKEIELHNSKSIIIYVPMPKLKAFQKIQIRLVR 421
S++ +L E +T S LK Q Y L+ SKSI + P+P ++A +K I+L +
Sbjct: 179 SLASSLDEGDTTSLLKLQRYNSY--DISRDTLYVSKSICLITPLPFMQACKKFLIQLYK 235
>BC020855-1|AAH20855.1| 507|Homo sapiens MGC24039 protein protein.
Length = 507
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 597 SISQALVELETNSDLKAQLRELYITKAKEIELHNSKSIIIYVPMPKLKAFQKIQIRLVR 421
S++ +L E +T S LK Q Y L+ SKSI + P+P ++A +K I+L +
Sbjct: 79 SLASSLDEGDTTSLLKLQRYNSY--DISRDTLYVSKSICLITPLPFMQACKKFLIQLYK 135
>BC012079-1|AAH12079.1| 888|Homo sapiens molybdenum cofactor
sulfurase protein.
Length = 888
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 427 KPDLDLLECLQFGHRHINDN*FTVMKFNFLGLGNVQFPQLSLQVRV 564
K D LE L G +I + FT+ ++ ++ L ++Q+P + VR+
Sbjct: 329 KHGFDTLERLTGGMENIKQHTFTLAQYTYMALSSLQYPNGAPVVRI 374
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 213 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 130
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AK222886-1|BAD96606.1| 888|Homo sapiens molybdenum cofactor
sulfurase variant protein.
Length = 888
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 427 KPDLDLLECLQFGHRHINDN*FTVMKFNFLGLGNVQFPQLSLQVRV 564
K D LE L G +I + FT+ ++ ++ L ++Q+P + VR+
Sbjct: 329 KHGFDTLERLTGGMENIKQHTFTLAQYTYMALSSLQYPNGAPVVRI 374
>AK125323-1|BAC86129.1| 1309|Homo sapiens protein ( Homo sapiens
cDNA FLJ43333 fis, clone NT2RI3006376. ).
Length = 1309
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 597 SISQALVELETNSDLKAQLRELYITKAKEIELHNSKSIIIYVPMPKLKAFQKIQIRLVR 421
S++ +L E +T S LK Q Y L+ SKSI + P+P ++A +K I+L +
Sbjct: 192 SLASSLDEGDTTSLLKLQRYNSY--DISRDTLYVSKSICLITPLPFMQACKKFLIQLYK 248
>AK000740-1|BAA91353.1| 888|Homo sapiens protein ( Homo sapiens
cDNA FLJ20733 fis, clone HEP08550. ).
Length = 888
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 427 KPDLDLLECLQFGHRHINDN*FTVMKFNFLGLGNVQFPQLSLQVRV 564
K D LE L G +I + FT+ ++ ++ L ++Q+P + VR+
Sbjct: 329 KHGFDTLERLTGGMENIKQHTFTLAQYTYMALSSLQYPNGAPVVRI 374
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 213 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 130
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 98 SQLTWLHLDHNQISTV--KEDAFQGLYK 123
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -1
Query: 591 SQALVELETNSDLKAQLRELYITKAKEIELHNSKSIIIYV----PMPKLKAFQKIQIRLV 424
+ +LVEL + D A L+ L + N K +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 423 RELEKKFSGK 394
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>U32178-1|AAB02179.1| 369|Homo sapiens deoxyhypusine synthase
protein.
Length = 369
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +1
Query: 274 QYGVIYRSQCPGTGPFLFVGYT--CLVAGLGQDLTVTNEHNMLTAELLF*LTDKPDLDLL 447
Q+G + +S+ P T +F+GYT + +G+ + + +HNM+ ++L + DL+
Sbjct: 82 QHGDLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMV--DVLVTTAGGVEEDLI 139
Query: 448 ECL 456
+CL
Sbjct: 140 KCL 142
>U26266-1|AAB02175.1| 321|Homo sapiens deoxyhypusine synthase
protein.
Length = 321
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +1
Query: 274 QYGVIYRSQCPGTGPFLFVGYT--CLVAGLGQDLTVTNEHNMLTAELLF*LTDKPDLDLL 447
Q+G + +S+ P T +F+GYT + +G+ + + +HNM+ ++L + DL+
Sbjct: 82 QHGDLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMV--DVLVTTAGGVEEDLI 139
Query: 448 ECL 456
+CL
Sbjct: 140 KCL 142
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -1
Query: 591 SQALVELETNSDLKAQLRELYITKAKEIELHNSKSIIIYV----PMPKLKAFQKIQIRLV 424
+ +LVEL + D A L+ L + N K +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 423 RELEKKFSGK 394
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -1
Query: 591 SQALVELETNSDLKAQLRELYITKAKEIELHNSKSIIIYV----PMPKLKAFQKIQIRLV 424
+ +LVEL + D A L+ L + N K +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 423 RELEKKFSGK 394
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).).
Length = 255
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -1
Query: 543 LRELYITKAKEIELHNSKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 394
LR L +T K L+ +I VP ++ FQK++++ +E EK F GK
Sbjct: 121 LRNL-VTNKKHYRLY----VIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -1
Query: 591 SQALVELETNSDLKAQLRELYITKAKEIELHNSKSIIIYV----PMPKLKAFQKIQIRLV 424
+ +LVEL + D A L+ L + N K +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 423 RELEKKFSGK 394
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,258,309
Number of Sequences: 237096
Number of extensions: 1926552
Number of successful extensions: 4462
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 4188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4447
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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