Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M06
(544 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B465B Cluster: PREDICTED: similar to lim domain... 300 1e-80
UniRef50_UPI0000E2029A Cluster: PREDICTED: LIM domain binding 2 ... 277 1e-73
UniRef50_O43679 Cluster: LIM domain-binding protein 2; n=83; Eum... 277 1e-73
UniRef50_Q86U70 Cluster: LIM domain-binding protein 1; n=20; Eut... 249 3e-65
UniRef50_Q4T633 Cluster: Chromosome undetermined SCAF8962, whole... 231 1e-59
UniRef50_O18356 Cluster: Short form of CHIP; n=2; Drosophila mel... 165 6e-40
UniRef50_Q17BY7 Cluster: Lim domain binding protein; n=1; Aedes ... 159 5e-38
UniRef50_Q8IU51 Cluster: F58A3.1b; n=5; Caenorhabditis|Rep: F58A... 88 1e-16
UniRef50_Q5AZL6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.26
UniRef50_Q7RWZ1 Cluster: Putative uncharacterized protein NCU015... 36 0.46
UniRef50_Q54N25 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q6FMV6 Cluster: Similarities with tr|Q07684 Saccharomyc... 34 2.4
UniRef50_UPI0000E485B9 Cluster: PREDICTED: hypothetical protein,... 33 3.2
UniRef50_Q6CD03 Cluster: Similar to tr|Q8WZY8 Neurospora crassa ... 33 3.2
UniRef50_A6SKS7 Cluster: Putative uncharacterized protein; n=2; ... 33 3.2
UniRef50_Q0UL96 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q115T0 Cluster: WGR; n=1; Trichodesmium erythraeum IMS1... 32 9.8
>UniRef50_UPI00015B465B Cluster: PREDICTED: similar to lim domain
binding protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to lim domain binding protein -
Nasonia vitripennis
Length = 797
Score = 300 bits (737), Expect = 1e-80
Identities = 132/147 (89%), Positives = 138/147 (93%)
Frame = +2
Query: 101 VDRRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPK 280
V RR PY+ QPDYR YELNKRLQQRTE+SDNLWWDAFA EFFEDDA+LTLTFCLEDGPK
Sbjct: 280 VPRRQPPYYQQPDYRFYELNKRLQQRTEESDNLWWDAFANEFFEDDASLTLTFCLEDGPK 339
Query: 281 RYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPIFTK 460
RYTIGRTLIPRYFRSI+EGGV+ELYY M+QPKESFHNTSITLDCDHC MVTHHGKP FTK
Sbjct: 340 RYTIGRTLIPRYFRSIFEGGVTELYYNMKQPKESFHNTSITLDCDHCVMVTHHGKPTFTK 399
Query: 461 VCTEGRLILEFTFDDLMRIKSWHMAVR 541
VCTEGRLILEFTFDDLMRIKSWHMAVR
Sbjct: 400 VCTEGRLILEFTFDDLMRIKSWHMAVR 426
>UniRef50_UPI0000E2029A Cluster: PREDICTED: LIM domain binding 2
isoform 1; n=1; Pan troglodytes|Rep: PREDICTED: LIM
domain binding 2 isoform 1 - Pan troglodytes
Length = 344
Score = 277 bits (679), Expect = 1e-73
Identities = 116/145 (80%), Positives = 133/145 (91%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRY 286
RRH PY QP+YR+YE+NKRLQ RTEDSDNLWWDAFATEFFEDDATLTL+FCLEDGPKRY
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDATLTLSFCLEDGPKRY 78
Query: 287 TIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPIFTKVC 466
TIGRTLIPRYF +++EGGV++LYY ++ KES+HN+SIT+DCD CTMVT HGKP+FTKVC
Sbjct: 79 TIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCTMVTQHGKPMFTKVC 138
Query: 467 TEGRLILEFTFDDLMRIKSWHMAVR 541
TEGRLILEFTFDDLMRIK+WH +R
Sbjct: 139 TEGRLILEFTFDDLMRIKTWHFTIR 163
>UniRef50_O43679 Cluster: LIM domain-binding protein 2; n=83;
Eumetazoa|Rep: LIM domain-binding protein 2 - Homo
sapiens (Human)
Length = 373
Score = 277 bits (679), Expect = 1e-73
Identities = 116/145 (80%), Positives = 133/145 (91%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRY 286
RRH PY QP+YR+YE+NKRLQ RTEDSDNLWWDAFATEFFEDDATLTL+FCLEDGPKRY
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDATLTLSFCLEDGPKRY 78
Query: 287 TIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPIFTKVC 466
TIGRTLIPRYF +++EGGV++LYY ++ KES+HN+SIT+DCD CTMVT HGKP+FTKVC
Sbjct: 79 TIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCTMVTQHGKPMFTKVC 138
Query: 467 TEGRLILEFTFDDLMRIKSWHMAVR 541
TEGRLILEFTFDDLMRIK+WH +R
Sbjct: 139 TEGRLILEFTFDDLMRIKTWHFTIR 163
>UniRef50_Q86U70 Cluster: LIM domain-binding protein 1; n=20;
Euteleostomi|Rep: LIM domain-binding protein 1 - Homo
sapiens (Human)
Length = 411
Score = 249 bits (610), Expect = 3e-65
Identities = 104/144 (72%), Positives = 123/144 (85%)
Frame = +2
Query: 110 RHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRYT 289
RH PY Q DYR++ELNKRLQ TE+ DNLWWDAF TEFFEDDA LT+TFCLEDGPKRYT
Sbjct: 59 RHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYT 118
Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPIFTKVCT 469
IGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+ ++LDCD +MVT HGKP+FT+VC
Sbjct: 119 IGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVTQHGKPMFTQVCV 178
Query: 470 EGRLILEFTFDDLMRIKSWHMAVR 541
EGRL LEF FDD+MRIK+WH ++R
Sbjct: 179 EGRLYLEFMFDDMMRIKTWHFSIR 202
>UniRef50_Q4T633 Cluster: Chromosome undetermined SCAF8962, whole
genome shotgun sequence; n=6; Tetraodontidae|Rep:
Chromosome undetermined SCAF8962, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 466
Score = 231 bits (564), Expect = 1e-59
Identities = 107/169 (63%), Positives = 124/169 (73%), Gaps = 24/169 (14%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRY 286
RR PY Q DYR+YELNKRLQ TED DNLWWDAF TEFFEDDA LT+TFCLEDGPKRY
Sbjct: 81 RRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRY 140
Query: 287 TIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPIFT--- 457
TIGRTLIPRYFRSI+EGG +EL+Y ++ PKESFH+ ++LDCD CTMVT +GKP+FT
Sbjct: 141 TIGRTLIPRYFRSIFEGGATELFYVLKHPKESFHSNFVSLDCDQCTMVTQNGKPMFTQVP 200
Query: 458 ---------------------KVCTEGRLILEFTFDDLMRIKSWHMAVR 541
+VC EGRL LEF FDD+MRIK+WH ++R
Sbjct: 201 ADAVARRLPLERCSTRVFSPDQVCVEGRLYLEFMFDDMMRIKTWHFSIR 249
>UniRef50_O18356 Cluster: Short form of CHIP; n=2; Drosophila
melanogaster|Rep: Short form of CHIP - Drosophila
melanogaster (Fruit fly)
Length = 365
Score = 165 bits (401), Expect = 6e-40
Identities = 70/94 (74%), Positives = 81/94 (86%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRY 286
RRH YF ++RV+ELNKRLQQR E+SDN WWD+F TEFFEDDA LT+ FCLEDGPKRY
Sbjct: 207 RRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRY 266
Query: 287 TIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFH 388
TIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFH
Sbjct: 267 TIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFH 300
Score = 37.1 bits (82), Expect = 0.26
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 400 HFRL*SLHDGHASRETDFY*GVHGRQVDIRVYV*RPDADQVVAHGGQG 543
H L +H HA+R+ + G+ R+ D+ V+V R A QV+AH QG
Sbjct: 302 HVGLRPVHGDHAARQALLHEGLRRRKTDLGVHVRRLHAHQVMAHDHQG 349
>UniRef50_Q17BY7 Cluster: Lim domain binding protein; n=1; Aedes
aegypti|Rep: Lim domain binding protein - Aedes aegypti
(Yellowfever mosquito)
Length = 579
Score = 159 bits (385), Expect = 5e-38
Identities = 65/132 (49%), Positives = 95/132 (71%)
Frame = +2
Query: 134 PDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPR 313
P Y+++ELN+RLQ+R ++ WWD F EFF+D ATL+LT EDG K + I R LIP+
Sbjct: 243 PSYKIFELNRRLQERHPQNEGTWWDYFVCEFFDDSATLSLTLRQEDGTKHFNIKRVLIPK 302
Query: 314 YFRSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEF 493
+F+S ++GGV ELY+ +R +E NTS+ +D + C M T + PI+TKV +EG+++LEF
Sbjct: 303 FFKSFFDGGVVELYFNLRHSREWLQNTSLFVDSEQCAMETIYINPIYTKVISEGKMVLEF 362
Query: 494 TFDDLMRIKSWH 529
D++MRIK+WH
Sbjct: 363 VPDEMMRIKTWH 374
>UniRef50_Q8IU51 Cluster: F58A3.1b; n=5; Caenorhabditis|Rep:
F58A3.1b - Caenorhabditis elegans
Length = 579
Score = 88.2 bits (209), Expect = 1e-16
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 14/149 (9%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
++R++++N+RL +E+ WWDAF+ EFF+DD L E +RY
Sbjct: 50 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 109
Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
I R IP++FRSI++ G+ EL Y +R P + N S + ++ +T + + +V
Sbjct: 110 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 169
Query: 464 CTEGRLILEFT-FDDLM--RIKSWHMAVR 541
TEG+L +EF FD++M RIK+W + ++
Sbjct: 170 NTEGKLYVEFAPFDEVMNYRIKAWTLELK 198
>UniRef50_Q5AZL6 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 387
Score = 37.1 bits (82), Expect = 0.26
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Frame = +2
Query: 170 QQRTEDSDNLWWDAFATEFFEDDATLTL-TFCLEDGPKRYTIGRTLIPRYFRSIYEGGVS 346
Q R E +D +W +F F+ L F + G K++ I + RY+ + + G+
Sbjct: 67 QSRGEAADLAYWSSFVDRFYSPTGVLRQGVFNNQAGAKQFEIATPALARYYLTQFASGIR 126
Query: 347 ELYYTMRQPKE-SFHNTSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRI 517
++ + P+E N ++C + ++ T G L +F F + + +
Sbjct: 127 QIQMLIEGPREKDLPNGGHLVECPKAFFIYWFTND--AQLFTTGTLKAQFDFQNKIEV 182
>UniRef50_Q7RWZ1 Cluster: Putative uncharacterized protein
NCU01543.1; n=2; Neurospora crassa|Rep: Putative
uncharacterized protein NCU01543.1 - Neurospora crassa
Length = 793
Score = 36.3 bits (80), Expect = 0.46
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Frame = +2
Query: 128 GQPDYRVYELNKRLQQRT--EDSDNL-WWDAFATEFFEDDATLTLTFCLEDG----PKRY 286
GQ ++ N+ L T + +D L +W F FF TF + PK Y
Sbjct: 401 GQCLLKLNSFNEHLNGFTGSQGADGLKYWQLFVQRFFSQKGVFRQTFKKREDEAADPKPY 460
Query: 287 TIGRTLIPRYFRSIYEGGVSELYYTMR 367
I +PR+F +E GVS++ M+
Sbjct: 461 EIDVAALPRFFNVHFESGVSKMQLVMQ 487
>UniRef50_Q54N25 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 762
Score = 33.9 bits (74), Expect = 2.4
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 221 EFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSI 400
EF ++ + L + + K+ + +TLI Y+ +++ G S LYY + + E F ++ I
Sbjct: 238 EFSKEQLDMRLLDFIHNDQKQKQMFKTLIKSYYENVFSNGFSFLYYYIYESIELFKSSQI 297
>UniRef50_Q6FMV6 Cluster: Similarities with tr|Q07684 Saccharomyces
cerevisiae YDL233w; n=1; Candida glabrata|Rep:
Similarities with tr|Q07684 Saccharomyces cerevisiae
YDL233w - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 674
Score = 33.9 bits (74), Expect = 2.4
Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +2
Query: 143 RVYELNKRLQQRTEDSDNL-WWDAFATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYF 319
R+YEL L + N +W+ F ++ F + + + L++ K++ L+P +
Sbjct: 346 RLYELVGILNRSAGQIGNPEYWNKFVSDVFVSNGLINFSRKLDNNFKQFQFYSALLPMFA 405
Query: 320 RSIYEGGVSELYYTMRQ-PKESFHNTSITLDCDHCTMVTHH 439
+ E G+ + ++Q + N +I +C CT H+
Sbjct: 406 IASAELGLVRIETVIQQLITQVLSNGTIFFNCPRCTFTYHY 446
>UniRef50_UPI0000E485B9 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 276
Score = 33.5 bits (73), Expect = 3.2
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 104 DRRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFED 235
D RHA +F P R + L +L RT D D++ W FA F E+
Sbjct: 226 DHRHAAFF--PSARGFSLTSKLVGRTIDKDDILW--FAKNFLEN 265
>UniRef50_Q6CD03 Cluster: Similar to tr|Q8WZY8 Neurospora crassa
Conserved hypothetical protein; n=1; Yarrowia
lipolytica|Rep: Similar to tr|Q8WZY8 Neurospora crassa
Conserved hypothetical protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 594
Score = 33.5 bits (73), Expect = 3.2
Identities = 12/64 (18%), Positives = 29/64 (45%)
Frame = +2
Query: 188 SDNLWWDAFATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMR 367
+D +W F +FF ++ + + K++ + +IPRY+ + + + +
Sbjct: 270 TDINFWKKFVGDFFSENGLMRYSVSNGKETKQFEVPLQIIPRYYHTFFMSNTKRIQIVLE 329
Query: 368 QPKE 379
P+E
Sbjct: 330 NPRE 333
>UniRef50_A6SKS7 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 779
Score = 33.5 bits (73), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 182 EDSDNLWWDAFATEFFEDDATL---TLTFCLEDG--PKRYTIGRTLIPRYFRSIYEGGVS 346
E D +W +FA FF L T ++ + K+Y I +PRYF + +E GV+
Sbjct: 428 EKDDLAYWGSFAERFFSRGGVLRYSTYSYSPTEKIREKQYEIASPAMPRYFHTHFESGVT 487
Query: 347 EL 352
+
Sbjct: 488 NM 489
>UniRef50_Q0UL96 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 735
Score = 32.7 bits (71), Expect = 5.6
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 203 WDAFATEFFEDDATLTLTFCL----EDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQ 370
W +F +FF T + C+ + K++ I +PRYF +++ V+ L T+
Sbjct: 396 WQSFVEKFFS--VTGSFIHCVFSTGSERTKQFEIVYAALPRYFFTLFNTDVTNLQITLDG 453
Query: 371 PKESFHNTSITLDCDHCTMV 430
E + + + CD +
Sbjct: 454 SAEKASGSELKVTCDRAKFI 473
>UniRef50_Q115T0 Cluster: WGR; n=1; Trichodesmium erythraeum
IMS101|Rep: WGR - Trichodesmium erythraeum (strain
IMS101)
Length = 998
Score = 31.9 bits (69), Expect = 9.8
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 119 PYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDD--ATLTLTFC--LEDGPKRY 286
P+F + K L+ EDS N W+ F + F + D + ++ C L D + +
Sbjct: 797 PHFRSNSQEMLAAVKLLESDWEDSRNFAWEIFQSYFDKIDWSPEIMVSICDSLRDDVREF 856
Query: 287 TIGRTLIPRYFRSIY 331
GR L+ RYF Y
Sbjct: 857 --GRQLVIRYFEDSY 869
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,591,320
Number of Sequences: 1657284
Number of extensions: 7876127
Number of successful extensions: 17412
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17407
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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