Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M06
(544 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058561-1|AAL13790.1| 577|Drosophila melanogaster LD25129p pro... 254 4e-68
AF010325-1|AAB62574.1| 577|Drosophila melanogaster CHIP protein. 254 4e-68
AE013599-3781|AAF47142.1| 577|Drosophila melanogaster CG3924-PA... 254 4e-68
AE013599-3780|AAM68293.2| 596|Drosophila melanogaster CG3924-PB... 254 4e-68
AF010328-1|AAB62577.1| 365|Drosophila melanogaster short form o... 165 3e-41
AY061206-1|AAL28754.1| 683|Drosophila melanogaster LD15650p pro... 28 9.5
AE013599-3627|AAF47025.2| 623|Drosophila melanogaster CG3941-PB... 28 9.5
AE013599-3626|AAF47026.3| 683|Drosophila melanogaster CG3941-PA... 28 9.5
>AY058561-1|AAL13790.1| 577|Drosophila melanogaster LD25129p
protein.
Length = 577
Score = 254 bits (623), Expect = 4e-68
Identities = 107/145 (73%), Positives = 124/145 (85%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRY 286
RRH YF ++RV+ELNKRLQQR E+SDN WWD+F TEFFEDDA LT+ FCLEDGPKRY
Sbjct: 207 RRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRY 266
Query: 287 TIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPIFTKVC 466
TIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFHNTSITLDCD CT++T HGKP FTKVC
Sbjct: 267 TIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHNTSITLDCDQCTVITQHGKPFFTKVC 326
Query: 467 TEGRLILEFTFDDLMRIKSWHMAVR 541
+ RLILEF +DD MRIKSWHM ++
Sbjct: 327 ADARLILEFMYDDYMRIKSWHMTIK 351
>AF010325-1|AAB62574.1| 577|Drosophila melanogaster CHIP protein.
Length = 577
Score = 254 bits (623), Expect = 4e-68
Identities = 107/145 (73%), Positives = 124/145 (85%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRY 286
RRH YF ++RV+ELNKRLQQR E+SDN WWD+F TEFFEDDA LT+ FCLEDGPKRY
Sbjct: 207 RRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRY 266
Query: 287 TIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPIFTKVC 466
TIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFHNTSITLDCD CT++T HGKP FTKVC
Sbjct: 267 TIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHNTSITLDCDQCTVITQHGKPFFTKVC 326
Query: 467 TEGRLILEFTFDDLMRIKSWHMAVR 541
+ RLILEF +DD MRIKSWHM ++
Sbjct: 327 ADARLILEFMYDDYMRIKSWHMTIK 351
>AE013599-3781|AAF47142.1| 577|Drosophila melanogaster CG3924-PA,
isoform A protein.
Length = 577
Score = 254 bits (623), Expect = 4e-68
Identities = 107/145 (73%), Positives = 124/145 (85%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRY 286
RRH YF ++RV+ELNKRLQQR E+SDN WWD+F TEFFEDDA LT+ FCLEDGPKRY
Sbjct: 207 RRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRY 266
Query: 287 TIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPIFTKVC 466
TIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFHNTSITLDCD CT++T HGKP FTKVC
Sbjct: 267 TIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHNTSITLDCDQCTVITQHGKPFFTKVC 326
Query: 467 TEGRLILEFTFDDLMRIKSWHMAVR 541
+ RLILEF +DD MRIKSWHM ++
Sbjct: 327 ADARLILEFMYDDYMRIKSWHMTIK 351
>AE013599-3780|AAM68293.2| 596|Drosophila melanogaster CG3924-PB,
isoform B protein.
Length = 596
Score = 254 bits (623), Expect = 4e-68
Identities = 107/145 (73%), Positives = 124/145 (85%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRY 286
RRH YF ++RV+ELNKRLQQR E+SDN WWD+F TEFFEDDA LT+ FCLEDGPKRY
Sbjct: 226 RRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRY 285
Query: 287 TIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPIFTKVC 466
TIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFHNTSITLDCD CT++T HGKP FTKVC
Sbjct: 286 TIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHNTSITLDCDQCTVITQHGKPFFTKVC 345
Query: 467 TEGRLILEFTFDDLMRIKSWHMAVR 541
+ RLILEF +DD MRIKSWHM ++
Sbjct: 346 ADARLILEFMYDDYMRIKSWHMTIK 370
>AF010328-1|AAB62577.1| 365|Drosophila melanogaster short form of
CHIP protein.
Length = 365
Score = 165 bits (401), Expect = 3e-41
Identities = 70/94 (74%), Positives = 81/94 (86%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRY 286
RRH YF ++RV+ELNKRLQQR E+SDN WWD+F TEFFEDDA LT+ FCLEDGPKRY
Sbjct: 207 RRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRY 266
Query: 287 TIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFH 388
TIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFH
Sbjct: 267 TIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFH 300
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 400 HFRL*SLHDGHASRETDFY*GVHGRQVDIRVYV*RPDADQVVAHGGQG 543
H L +H HA+R+ + G+ R+ D+ V+V R A QV+AH QG
Sbjct: 302 HVGLRPVHGDHAARQALLHEGLRRRKTDLGVHVRRLHAHQVMAHDHQG 349
>AY061206-1|AAL28754.1| 683|Drosophila melanogaster LD15650p
protein.
Length = 683
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 182 EDSDNLWWDAFATEFFEDDA 241
ED DN+ + F TE+ EDDA
Sbjct: 594 EDMDNVKQEEFVTEYLEDDA 613
>AE013599-3627|AAF47025.2| 623|Drosophila melanogaster CG3941-PB,
isoform B protein.
Length = 623
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 182 EDSDNLWWDAFATEFFEDDA 241
ED DN+ + F TE+ EDDA
Sbjct: 534 EDMDNVKQEEFVTEYLEDDA 553
>AE013599-3626|AAF47026.3| 683|Drosophila melanogaster CG3941-PA,
isoform A protein.
Length = 683
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 182 EDSDNLWWDAFATEFFEDDA 241
ED DN+ + F TE+ EDDA
Sbjct: 594 EDMDNVKQEEFVTEYLEDDA 613
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,378,163
Number of Sequences: 53049
Number of extensions: 369873
Number of successful extensions: 653
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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