Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_M06
         (544 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81017-3|CAB54257.1|  629|Caenorhabditis elegans Hypothetical pr...    88   3e-18
Z81017-2|CAB02672.1|  578|Caenorhabditis elegans Hypothetical pr...    88   3e-18
Z81017-1|CAB02669.1|  592|Caenorhabditis elegans Hypothetical pr...    88   3e-18
U80221-1|AAB38367.1|  579|Caenorhabditis elegans F58A3.1b protein.     88   3e-18
U80220-1|AAB38366.1|  592|Caenorhabditis elegans F58A3.1a protein.     88   3e-18
AL132863-8|CAB60576.2|  519|Caenorhabditis elegans Hypothetical ...    29   2.9  
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC087079-7|AAK27870.1|  145|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z81017-3|CAB54257.1|  629|Caenorhabditis elegans Hypothetical
           protein F58A3.1c protein.
          Length = 629

 Score = 88.2 bits (209), Expect = 3e-18
 Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 14/149 (9%)
 Frame = +2

Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
           ++R++++N+RL        +E+    WWDAF+ EFF+DD  L      E       +RY 
Sbjct: 100 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 159

Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
           I R  IP++FRSI++ G+ EL Y +R P    +  N S   + ++   +T + +    +V
Sbjct: 160 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 219

Query: 464 CTEGRLILEFT-FDDLM--RIKSWHMAVR 541
            TEG+L +EF  FD++M  RIK+W + ++
Sbjct: 220 NTEGKLYVEFAPFDEVMNYRIKAWTLELK 248


>Z81017-2|CAB02672.1|  578|Caenorhabditis elegans Hypothetical
           protein F58A3.1b protein.
          Length = 578

 Score = 88.2 bits (209), Expect = 3e-18
 Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 14/149 (9%)
 Frame = +2

Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
           ++R++++N+RL        +E+    WWDAF+ EFF+DD  L      E       +RY 
Sbjct: 49  EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 108

Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
           I R  IP++FRSI++ G+ EL Y +R P    +  N S   + ++   +T + +    +V
Sbjct: 109 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 168

Query: 464 CTEGRLILEFT-FDDLM--RIKSWHMAVR 541
            TEG+L +EF  FD++M  RIK+W + ++
Sbjct: 169 NTEGKLYVEFAPFDEVMNYRIKAWTLELK 197


>Z81017-1|CAB02669.1|  592|Caenorhabditis elegans Hypothetical
           protein F58A3.1a protein.
          Length = 592

 Score = 88.2 bits (209), Expect = 3e-18
 Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 14/149 (9%)
 Frame = +2

Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
           ++R++++N+RL        +E+    WWDAF+ EFF+DD  L      E       +RY 
Sbjct: 63  EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 122

Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
           I R  IP++FRSI++ G+ EL Y +R P    +  N S   + ++   +T + +    +V
Sbjct: 123 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 182

Query: 464 CTEGRLILEFT-FDDLM--RIKSWHMAVR 541
            TEG+L +EF  FD++M  RIK+W + ++
Sbjct: 183 NTEGKLYVEFAPFDEVMNYRIKAWTLELK 211


>U80221-1|AAB38367.1|  579|Caenorhabditis elegans F58A3.1b protein.
          Length = 579

 Score = 88.2 bits (209), Expect = 3e-18
 Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 14/149 (9%)
 Frame = +2

Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
           ++R++++N+RL        +E+    WWDAF+ EFF+DD  L      E       +RY 
Sbjct: 50  EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 109

Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
           I R  IP++FRSI++ G+ EL Y +R P    +  N S   + ++   +T + +    +V
Sbjct: 110 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 169

Query: 464 CTEGRLILEFT-FDDLM--RIKSWHMAVR 541
            TEG+L +EF  FD++M  RIK+W + ++
Sbjct: 170 NTEGKLYVEFAPFDEVMNYRIKAWTLELK 198


>U80220-1|AAB38366.1|  592|Caenorhabditis elegans F58A3.1a protein.
          Length = 592

 Score = 88.2 bits (209), Expect = 3e-18
 Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 14/149 (9%)
 Frame = +2

Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
           ++R++++N+RL        +E+    WWDAF+ EFF+DD  L      E       +RY 
Sbjct: 63  EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 122

Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
           I R  IP++FRSI++ G+ EL Y +R P    +  N S   + ++   +T + +    +V
Sbjct: 123 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 182

Query: 464 CTEGRLILEFT-FDDLM--RIKSWHMAVR 541
            TEG+L +EF  FD++M  RIK+W + ++
Sbjct: 183 NTEGKLYVEFAPFDEVMNYRIKAWTLELK 211


>AL132863-8|CAB60576.2|  519|Caenorhabditis elegans Hypothetical
           protein Y37H2A.7 protein.
          Length = 519

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 323 SIYEGGVSELYYTMRQPKESFHNTSITLDCDH 418
           S+ E G+S+LY  M+ PK S     +T  C++
Sbjct: 174 SVVEAGLSDLYRIMKNPKFSLETLDVTF-CEY 204


>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
           protein C50F2.2 protein.
          Length = 1029

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 137 DYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTL 253
           D   YE+ + L+ +T ++    W  F  E  +DD   TL
Sbjct: 744 DVEAYEITEDLESQTYEASQSDWKEFCLEDVDDDVDETL 782


>AC087079-7|AAK27870.1|  145|Caenorhabditis elegans Hypothetical
           protein Y37E3.8a protein.
          Length = 145

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 104 DRRHAPYFGQPDYRVYELNKRLQQ-RTEDSDNLW 202
           D+ H  YFG+   RV+ LNK      T + + LW
Sbjct: 46  DKYHPGYFGKVGMRVFHLNKNQHYCPTVNVERLW 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,309,533
Number of Sequences: 27780
Number of extensions: 189900
Number of successful extensions: 412
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)