Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M05
(491 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 200 1e-50
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 187 1e-46
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 156 3e-37
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 143 2e-33
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 139 4e-32
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 138 8e-32
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 134 8e-31
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 133 2e-30
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 125 6e-28
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 120 1e-26
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 120 1e-26
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 116 4e-25
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 109 4e-23
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 107 1e-22
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 102 4e-21
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 102 4e-21
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 102 4e-21
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 84 1e-15
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 83 2e-15
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 82 8e-15
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 81 2e-14
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 75 7e-13
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 62 9e-09
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 57 2e-07
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 39 0.070
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 36 0.65
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.65
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 36 0.65
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 35 0.86
UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative, Ty3-... 34 2.0
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 34 2.0
UniRef50_A4SNX4 Cluster: Putative uncharacterized protein; n=2; ... 33 4.6
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 33 4.6
UniRef50_Q7XM47 Cluster: OSJNBb0018J12.12 protein; n=1; Oryza sa... 33 4.6
UniRef50_Q53L49 Cluster: Retrotransposon protein, putative, Ty3-... 33 4.6
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 33 4.6
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 4.6
UniRef50_A7LZU6 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 6.0
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_UPI0000499AB1 Cluster: hypothetical protein 215.t00008;... 32 8.0
UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n... 32 8.0
UniRef50_Q3AAF6 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_Q10KH1 Cluster: Retrotransposon protein, putative, Ty3-... 32 8.0
UniRef50_Q7RI20 Cluster: Homo sapiens KIAA1035 protein-related; ... 32 8.0
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 32 8.0
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 32 8.0
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 32 8.0
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 200 bits (488), Expect = 1e-50
Identities = 97/137 (70%), Positives = 111/137 (81%), Gaps = 2/137 (1%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGK 207
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHAL-VAGIDRYPRKVTAAMGK 59
Query: 208 NKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFE 381
KI KRSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+FE
Sbjct: 60 KKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFE 119
Query: 382 ERYKSGKNKWFFQKLRF 432
ERYK+GKNKWFFQKLRF
Sbjct: 120 ERYKTGKNKWFFQKLRF 136
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 187 bits (456), Expect = 1e-46
Identities = 89/137 (64%), Positives = 108/137 (78%), Gaps = 2/137 (1%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGK 207
MGKIMKPGKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP KV K MGK
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAI-IAGIDRYPLKVTKDMGK 59
Query: 208 NKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFE 381
KI KR+K+KPF+K V+Y HL+PTRYSVD +F+K + + LK P+K++K + +FE
Sbjct: 60 KKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFE 119
Query: 382 ERYKSGKNKWFFQKLRF 432
ERYK+GKNKWFF KLRF
Sbjct: 120 ERYKTGKNKWFFTKLRF 136
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 156 bits (378), Expect = 3e-37
Identities = 71/137 (51%), Positives = 100/137 (72%), Gaps = 2/137 (1%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGK 207
M K +K GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP KV K+ G
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHAL-VAGIERYPSKVTKKHGA 59
Query: 208 NKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFE 381
K+ KR+KIKPF+K VNYNHL+PTRY++D K S + + P++R++ + + FE
Sbjct: 60 KKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFE 119
Query: 382 ERYKSGKNKWFFQKLRF 432
ER+++GKN+WFF KLRF
Sbjct: 120 ERHQAGKNQWFFSKLRF 136
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 143 bits (347), Expect = 2e-33
Identities = 71/139 (51%), Positives = 94/139 (67%), Gaps = 4/139 (2%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGK 207
MGK +KP +V LVL+GR+AG+K +V+K YD GTS++PY HA V GIDRYPRKV MGK
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAF-VVGIDRYPRKVTATMGK 59
Query: 208 NKIHKRSKIKPFVKGVNYNHLMPTRYSVD-FSFEK---FSAKDLKDPAKRKKLRFNTRVR 375
K +R+++K F K +NYNHLM TRYSV F +K F K+ + RK+ + +
Sbjct: 60 KKFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQTV 119
Query: 376 FEERYKSGKNKWFFQKLRF 432
ER+ + KN+WFF KLRF
Sbjct: 120 MRERFLAAKNRWFFTKLRF 138
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 139 bits (336), Expect = 4e-32
Identities = 60/133 (45%), Positives = 94/133 (70%)
Frame = +1
Query: 34 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNK 213
K +KPGKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP+KV + M K
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSL-IAGMKKYPKKVVRGMSKRT 60
Query: 214 IHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYK 393
I +RS++ F++ VN+ H +PTRY++D S E ++ D +K+ + + R F+ RY
Sbjct: 61 IQRRSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYN 120
Query: 394 SGKNKWFFQKLRF 432
+G N+WFFQ+LRF
Sbjct: 121 AGSNRWFFQRLRF 133
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 138 bits (333), Expect = 8e-32
Identities = 65/135 (48%), Positives = 91/135 (67%), Gaps = 2/135 (1%)
Frame = +1
Query: 34 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNK 213
K MK G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP KV +RMGK
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAI-VAGIERYPLKVTRRMGKKM 111
Query: 214 IHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEER 387
+ KRS+IKPF+K VNYNHLMPTRY+++ K S + K+ + R+ + + E+R
Sbjct: 112 VEKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDR 171
Query: 388 YKSGKNKWFFQKLRF 432
Y SGKN+WFF LRF
Sbjct: 172 YTSGKNRWFFTPLRF 186
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 134 bits (325), Expect = 8e-31
Identities = 63/135 (46%), Positives = 92/135 (68%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGK 207
M K +KPGKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP+KV + M K
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRAL-LAGIKKYPKKVVRGMSK 59
Query: 208 NKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEER 387
I +RS++ F++ VN+ H +PTRY+VD S E ++ D +KR + + R F+ R
Sbjct: 60 QTIARRSQVGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQAR 119
Query: 388 YKSGKNKWFFQKLRF 432
Y +G + WFFQ+LRF
Sbjct: 120 YNAGSSMWFFQRLRF 134
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 133 bits (322), Expect = 2e-30
Identities = 67/142 (47%), Positives = 95/142 (66%), Gaps = 9/142 (6%)
Frame = +1
Query: 34 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAXSVAGIDRYPRKVHKRMGK 207
K +KPG++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR + + M +
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCL-VAGIDKYPRSIVRSMSR 62
Query: 208 NKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK-FS------AKDLKDPAKRKKLRFNT 366
I KR+ I+ FVK VNYNH+MPTRY+ + E F+ + AKR R
Sbjct: 63 KTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAHTRLAV 122
Query: 367 RVRFEERYKSGKNKWFFQKLRF 432
+ FE ++K+GK+KWFF KLRF
Sbjct: 123 KKIFEAKHKAGKSKWFFSKLRF 144
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 125 bits (301), Expect = 6e-28
Identities = 62/129 (48%), Positives = 87/129 (67%), Gaps = 3/129 (2%)
Frame = +1
Query: 55 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNKIHKRSK 231
V LV Y+ R +V+K +D+G+ DK + + + AGI+RYP+KV KRMG KI KRSK
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIA-AGIERYPQKVTKRMGAKKIAKRSK 121
Query: 232 IKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKN 405
+KPFVK ++YNHLMPTRY+++ K + K+P++R+ + + FEE+Y SGKN
Sbjct: 122 VKPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEEKYTSGKN 181
Query: 406 KWFFQKLRF 432
KWFF LRF
Sbjct: 182 KWFFTPLRF 190
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 120 bits (290), Expect = 1e-26
Identities = 55/74 (74%), Positives = 65/74 (87%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGK 207
MGKIMK GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR+V +RM K
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHAL-VAGIDRYPRRVTRRMNK 59
Query: 208 NKIHKRSKIKPFVK 249
++HKRSKIKPF+K
Sbjct: 60 TRLHKRSKIKPFIK 73
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 120 bits (290), Expect = 1e-26
Identities = 65/154 (42%), Positives = 97/154 (62%), Gaps = 18/154 (11%)
Frame = +1
Query: 25 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMG 204
+MGK +KPG+++++L+GRYAG+KAI++K +E T D + + V GI RYPRKV KRMG
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGL-VVGIQRYPRKVTKRMG 957
Query: 205 KNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFS--------FEKFSAKDLKDPAKRKKLRF 360
+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+ KRK+LR
Sbjct: 958 QKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKNVEKRKELRK 1017
Query: 361 NTRVRFEERY----------KSGKNKWFFQKLRF 432
N R E+Y K ++++ F KLRF
Sbjct: 1018 NLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 1051
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 116 bits (278), Expect = 4e-25
Identities = 64/147 (43%), Positives = 97/147 (65%), Gaps = 11/147 (7%)
Frame = +1
Query: 25 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMG 204
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P KVHKR+
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVL-VAGVEKAPLKVHKRLS 75
Query: 205 KNKIHKRSKIKPFVKGVNYNHLMPTRYSV-DFSFEK-FSAKDLKDPAKRKK------LRF 360
K K+ K+S IKPF+K +N NH+MPTRY V DF + D+++ +K+ L F
Sbjct: 76 KEKLKKKSTIKPFLKSINMNHVMPTRYVVSDFDIKPLLQGIDMQEADGKKQALRALHLAF 135
Query: 361 NTR-VRFE-ERYKSGKNKWFFQK-LRF 432
N + + + E+ K+ K+ F +K LRF
Sbjct: 136 NDKLINIQSEKGKAPKDLIFLRKPLRF 162
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 109 bits (261), Expect = 4e-23
Identities = 46/91 (50%), Positives = 70/91 (76%)
Frame = +1
Query: 22 SKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRM 201
+ G+ +K G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R P+KV KRM
Sbjct: 14 ASFGRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVL-VAGVERSPKKVTKRM 72
Query: 202 GKNKIHKRSKIKPFVKGVNYNHLMPTRYSVD 294
G KI KR+ +KPF+K VN NH+MPTR ++
Sbjct: 73 GSKKIQKRTSVKPFIKYVNLNHIMPTRGQIN 103
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 107 bits (258), Expect = 1e-22
Identities = 55/129 (42%), Positives = 84/129 (65%), Gaps = 3/129 (2%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGK 207
MGK++KPG+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P KV K+M
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCL-VAGVEKAPMKVTKKMSS 59
Query: 208 NKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK---FSAKDLKDPAKRKKLRFNTRVRF 378
KI KR K+K FVK VN NHLMPTRY V + + S + +++ + RK+ R + +
Sbjct: 60 KKIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSVKAVL 119
Query: 379 EERYKSGKN 405
EE + + +N
Sbjct: 120 EECFSNPEN 128
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 102 bits (245), Expect = 4e-21
Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 7/142 (4%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGK 207
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG +V G++R P K+ ++M
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFV-TVVGVERAPLKITRKMSA 59
Query: 208 NKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFS-AKDLK----DPAKRKKLRFNTRV 372
R+ +K F K +N NH+MPT+Y+V + E+F+ K +K + K + +
Sbjct: 60 KVQEMRTSVKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGKVYPISQKKAI 117
Query: 373 --RFEERYKSGKNKWFFQKLRF 432
+F E Y+ GK W F KLRF
Sbjct: 118 SSQFAEEYRKGKESWLFTKLRF 139
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 102 bits (245), Expect = 4e-21
Identities = 45/82 (54%), Positives = 64/82 (78%)
Frame = +1
Query: 40 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNKIH 219
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P KV K+M K KI
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCL-VAGIEKHPLKVTKKMSKGKII 155
Query: 220 KRSKIKPFVKGVNYNHLMPTRY 285
KRSK+K FVK +N NH++PTRY
Sbjct: 156 KRSKVKAFVKYINVNHILPTRY 177
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 102 bits (245), Expect = 4e-21
Identities = 55/139 (39%), Positives = 88/139 (63%), Gaps = 7/139 (5%)
Frame = +1
Query: 37 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNKI 216
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+KV K M +
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAI-VMGIEKYPKKVTKDMPTEVL 61
Query: 217 HKRSKIKPFVKGVNYNHLMPTRYSV---DFSFEKFSAKD----LKDPAKRKKLRFNTRVR 375
K++++K FVK VN+NH+M TR++V DF F+K S + LKD +K L
Sbjct: 62 VKKTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDAPAKKALLTEYAAV 120
Query: 376 FEERYKSGKNKWFFQKLRF 432
++Y + K WFF+ L+F
Sbjct: 121 LRQKYLNNKMAWFFKPLQF 139
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 84.2 bits (199), Expect = 1e-15
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = +1
Query: 37 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNKI 216
I+KPG V +VL GR+AG+KA++V E G VAGI PR++ M +
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIV----EALPHNERGSYAIVAGIAALPRRITNSMSDEEA 60
Query: 217 HKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKF-SAKDLKDPAKRKKLRFNTRVRFEERYK 393
R +++ FVK +N NHLMPT ++ +++ F S + + D KR+++ F+ R
Sbjct: 61 VCRGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREIIETVNKDFQRRIL 120
Query: 394 SGKNKWFFQKL 426
++ WFF KL
Sbjct: 121 EHRDTWFFTKL 131
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 83.4 bits (197), Expect = 2e-15
Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 18/128 (14%)
Frame = +1
Query: 103 VKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTR 282
+K +E T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N NH+MPTR
Sbjct: 136 IKANEESTKDAKFPNGL-VVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTR 194
Query: 283 YSVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEERY----------KSGKNK 408
Y ++ S E+ +LK+ KRK LR N R E+Y K +++
Sbjct: 195 YRLEESTLKEVRDRIERVKEAELKNVEKRKDLRKNLRKYLAEKYRTLPAGSLADKKAQSR 254
Query: 409 WFFQKLRF 432
+ F KLRF
Sbjct: 255 FLFSKLRF 262
Score = 32.7 bits (71), Expect = 4.6
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +1
Query: 25 KMGKIMKPGKVVLVLSGRYAG 87
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 81.8 bits (193), Expect = 8e-15
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +1
Query: 184 KVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK-KLRF 360
+V K+M + K KRSK K F+K +NY+HLMPTRY++D +F+ D+ D A +K +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 361 NTRVRFEERYKSGKNKWFFQKLRF 432
+ EER+K+GK++WFF +L F
Sbjct: 161 EAKKLLEERFKTGKSRWFFTRLAF 184
Score = 76.2 bits (179), Expect = 4e-13
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +1
Query: 43 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNKIHK 222
+PGKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ PRKV +N +H+
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHAL-VCGLSTIPRKV-----RNDLHR 77
Query: 223 RSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAK-DLKDPAKRKKLR 357
++ PF ++ R SV F + + K D K AKR K +
Sbjct: 78 CARTAPF----GCTEILTAR-SVAFENAQVTKKMDEKKQAKRSKCK 118
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 80.6 bits (190), Expect = 2e-14
Identities = 43/75 (57%), Positives = 50/75 (66%)
Frame = +1
Query: 85 GRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYN 264
G +I+ + D+GTSDK Y HA VAGID YPRK+ +GK KI KRSKIK FV NYN
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHA-QVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNYN 62
Query: 265 HLMPTRYSVDFSFEK 309
HL RYSVD +K
Sbjct: 63 HLKSIRYSVDIPLDK 77
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 75.4 bits (177), Expect = 7e-13
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYD-EGTSDKPYGHAXSVAGIDRYPRKVHKRMG 204
M I K G+VV+VLSG+YAG+KA V+KN + E +K + GI + +K+ M
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKNSNIESLCEKKI----IILGIKKEMKKIKYNMS 56
Query: 205 KNKIHKRSKIKPFVKGVNYNHLMPTRYSVD-----------FSFEKFSAKDLKDPAKRKK 351
K KI + K F+K +N H+ PTRY ++ + K K + ++ K
Sbjct: 57 KRKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNEHTNEKAK 116
Query: 352 LRF-NTRVRFEERYKSGKNKWFFQKLRF 432
+ + ++R GKN WFF+K++F
Sbjct: 117 VNLVSINNYLQDRLLRGKNLWFFKKMKF 144
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 61.7 bits (143), Expect = 9e-09
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = +1
Query: 202 GKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 381
G+ + +R + +P V G + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 382 ERYKSGKNKWFFQKLRF 432
E KSG+NKWFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 57.2 bits (132), Expect = 2e-07
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +1
Query: 46 PGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNKIHKR 225
P +V+V SG+ AG+KA+V+K DE A + R P++ K +
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE--------RYVLTACVVRIPKEPEDHQPKWIKRRN 56
Query: 226 SKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERYKSGK 402
+K +K N HL+ TRY D ++D A+ KK+ N T+ + +K K
Sbjct: 57 AKFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAWKENK 116
Query: 403 NKWFFQKLRF 432
K+ F L F
Sbjct: 117 AKFLFSSLSF 126
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 38.7 bits (86), Expect = 0.070
Identities = 12/39 (30%), Positives = 30/39 (76%)
Frame = +1
Query: 7 RTEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 123
+T +P+K+ ++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 47 KTAHPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 35.5 bits (78), Expect = 0.65
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +1
Query: 49 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGH-AXSVAGIDRYPRKVHKRM--GKNKIH 219
GK++ L+G+YAG+ +VK+Y + + K + H ++ K K N
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTNTKFTNKNSKSFISKMNDQP 67
Query: 220 KRSKIKPFVKGVNYNHLMPTRYSVDFSF 303
K K K +K +N NH++ ++ S++ ++
Sbjct: 68 KIFKYKIKLKILNANHIIVSKKSINVNW 95
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 35.5 bits (78), Expect = 0.65
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 34 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 123
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 35.5 bits (78), Expect = 0.65
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 7 RTEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 123
RT P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 78 RTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 35.1 bits (77), Expect = 0.86
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 4 TRTEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 123
TR P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 66 TRKPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 105
>UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=7; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 1333
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 374 RTLVLKRSFLRLAGSFRSFALNFSKL 297
RT+ L RSFL LAG +R F NFSK+
Sbjct: 760 RTVTLVRSFLGLAGYYRRFIENFSKI 785
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 33.9 bits (74), Expect = 2.0
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = +1
Query: 19 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 126
P K+ + PG V+++L+GR+ G++ + +K+ ++ T
Sbjct: 27 PQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNT 62
>UniRef50_A4SNX4 Cluster: Putative uncharacterized protein; n=2;
Gammaproteobacteria|Rep: Putative uncharacterized
protein - Aeromonas salmonicida (strain A449)
Length = 277
Score = 32.7 bits (71), Expect = 4.6
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +1
Query: 25 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHK--R 198
K+ + P K L LS G+KAI++ + PY ++ I+ +K HK R
Sbjct: 156 KLALVRNPNKSDLTLSTGEQGQKAIIITQAKDLNDTHPYFTDDAILAIN-MKQKTHKINR 214
Query: 199 MGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDF 297
I + KIK YN RYS F
Sbjct: 215 HSFQSIVFKHKIKKNPNSDMYNFTDRARYSEKF 247
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 32.7 bits (71), Expect = 4.6
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 19 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 123
P+K+ +K G +V++L+G + G + +V+K D G
Sbjct: 65 PTKLRPSIKSGTIVILLAGVFRGSRVVVLKQLDSG 99
>UniRef50_Q7XM47 Cluster: OSJNBb0018J12.12 protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBb0018J12.12
protein - Oryza sativa subsp. japonica (Rice)
Length = 902
Score = 32.7 bits (71), Expect = 4.6
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -1
Query: 374 RTLVLKRSFLRLAGSFRSFALNFSKL 297
+T+ RSFLRLAG +R F NFSK+
Sbjct: 562 KTVTQIRSFLRLAGYYRRFIENFSKI 587
>UniRef50_Q53L49 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 948
Score = 32.7 bits (71), Expect = 4.6
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -1
Query: 374 RTLVLKRSFLRLAGSFRSFALNFSKL 297
RT++ RSFL LAG +R F NFSK+
Sbjct: 691 RTVIQVRSFLGLAGYYRRFIENFSKI 716
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 32.7 bits (71), Expect = 4.6
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +1
Query: 19 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 123
P+ + KI+ PG+V+++LSGR+ G++ + +K G
Sbjct: 52 PATLRKIV-PGQVLILLSGRFQGKRVVFLKQLKSG 85
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 4.6
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 120
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_A7LZU6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 265
Score = 32.3 bits (70), Expect = 6.0
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 262 NHLMPTRYSVD-FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWF 414
N L P+ YSVD ++++S K L PA KLRF R YK G N F
Sbjct: 207 NDLRPSTYSVDNVEWQQYS-KTLLAPATANKLRFEVRT-----YKEGDNSGF 252
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 32.3 bits (70), Expect = 6.0
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 7 RTEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 123
+T P + PG V+++L+GR+ G++ +++K D+G
Sbjct: 28 KTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQG 66
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 295 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 396
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_UPI0000499AB1 Cluster: hypothetical protein 215.t00008;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 215.t00008 - Entamoeba histolytica HM-1:IMSS
Length = 260
Score = 31.9 bits (69), Expect = 8.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 309 FFKAEVYRITGWH*MIVVYTFYERLDFRPLVNFIFSHPFMNL 184
F + E ++ H + VY ++ER DF L NFI+ H L
Sbjct: 58 FIELEERQLVKSHNLRCVYFYFERKDFFELENFIYEHKLSKL 99
>UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECCEB7 UniRef100 entry -
Gallus gallus
Length = 75
Score = 31.9 bits (69), Expect = 8.0
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +1
Query: 199 MGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRF 378
+GK K K+ K K + + HL+ ++ + + +K + LK K+K +F+ + +
Sbjct: 1 VGKKKKEKKKKKKENYRNILEAHLLKSKQTNKQTNKKHPSFTLKKKKKKKAFKFSGKFKS 60
Query: 379 EER 387
EER
Sbjct: 61 EER 63
>UniRef50_Q3AAF6 Cluster: Putative uncharacterized protein; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: Putative
uncharacterized protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 266
Score = 31.9 bits (69), Expect = 8.0
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 169 DRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFE-KFSAKDLKDPAKR 345
D+Y + GKN+ +IK VKG+ P+RY F++ K K+ +D K
Sbjct: 177 DKYKHQQKLLPGKNE----REIKLLVKGIREGTAAPSRYMESFNYVIKIKTKNARDETKE 232
Query: 346 KKLRFNT 366
++++++
Sbjct: 233 VEIKYSS 239
>UniRef50_Q10KH1 Cluster: Retrotransposon protein, putative, Ty3-gypsy
subclass; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy subclass - Oryza sativa subsp. japonica (Rice)
Length = 1357
Score = 31.9 bits (69), Expect = 8.0
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -1
Query: 422 FWKNHLFFPLLYLSSKRTLVLKRSFLRLAGSFRSFALNFSKL 297
FW + + F L +T+ RSFL LAG +R F NFSK+
Sbjct: 894 FWLSEVKF--LGHKQPKTVTQVRSFLGLAGYYRRFIENFSKI 933
>UniRef50_Q7RI20 Cluster: Homo sapiens KIAA1035 protein-related;
n=3; Plasmodium (Vinckeia)|Rep: Homo sapiens KIAA1035
protein-related - Plasmodium yoelii yoelii
Length = 1563
Score = 31.9 bits (69), Expect = 8.0
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 175 YPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLK 330
Y +++ K K + + + K NYNH+ +YSVDFS +KF ++K
Sbjct: 401 YTKELKKEKEKRQTYMNEFLNDINKETNYNHV---KYSVDFS-DKFLVSNIK 448
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 31.9 bits (69), Expect = 8.0
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +1
Query: 13 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 108
EY + + K PG + ++L+GR+ GR+A+++K
Sbjct: 25 EYTT-LRKSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 31.9 bits (69), Expect = 8.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 274 PTRYSVDFSFEKFSAKDLKDPAKRKKLRF 360
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 31.9 bits (69), Expect = 8.0
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 265 HLMPTRYSVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 411
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,145,730
Number of Sequences: 1657284
Number of extensions: 9655051
Number of successful extensions: 25186
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 24603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25141
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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