Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M05
(491 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0470 - 10700092-10700505 140 4e-34
10_08_0951 - 21769342-21769752 140 6e-34
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 37 0.008
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 30 0.88
10_02_0059 + 4785858-4786988 30 1.2
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 30 1.2
09_02_0555 - 10588685-10592038 30 1.2
03_02_1029 - 13488535-13493037 30 1.2
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 29 2.7
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 29 2.7
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 29 2.7
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 29 2.7
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 29 2.7
08_01_0775 - 7531397-7531564,7531590-7532771 28 3.5
08_02_1498 + 27553449-27553730,27553834-27553946,27554063-275541... 28 4.7
03_05_0527 + 25220375-25221425,25221513-25222182,25222347-252224... 28 4.7
11_04_0118 + 13624086-13625120 27 6.2
04_04_0805 + 28184394-28185239 27 6.2
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 27 6.2
10_04_0007 + 7439378-7439677,7439873-7440308,7440483-7440593,744... 27 8.2
06_03_0049 + 15961706-15962017,15962952-15963851,15964769-159649... 27 8.2
05_01_0055 - 390371-390457,390637-390715,390804-390856,390951-39... 27 8.2
03_06_0508 + 34417540-34417649,34418239-34418338,34418445-344184... 27 8.2
>02_02_0470 - 10700092-10700505
Length = 137
Score = 140 bits (340), Expect = 4e-34
Identities = 67/138 (48%), Positives = 97/138 (70%), Gaps = 3/138 (2%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGK 207
M K +KPGK V++L GRYAGRKA++V+ ++EGT D+PYGH VAG+ +YP+KV ++
Sbjct: 1 MVKFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCL-VAGLAKYPKKVIRKDSA 59
Query: 208 NKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKR-KKLRF--NTRVRF 378
K K+S++K F+K VN+ H+MPTRY++D F+ ++ A R KK+ + R
Sbjct: 60 KKTAKKSRVKCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKVAACKAAKARL 119
Query: 379 EERYKSGKNKWFFQKLRF 432
EER+K+GKN+WFF KLRF
Sbjct: 120 EERFKTGKNRWFFTKLRF 137
>10_08_0951 - 21769342-21769752
Length = 136
Score = 140 bits (339), Expect = 6e-34
Identities = 64/137 (46%), Positives = 97/137 (70%), Gaps = 2/137 (1%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGK 207
M K +KPGK V++L GR+AGRKA++V+ ++EGT D+PYGH VAG+ +YP+KV ++
Sbjct: 1 MVKFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCL-VAGLAKYPKKVIRKDSA 59
Query: 208 NKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRF--NTRVRFE 381
K K+S++K F+K VN+ HLMPTRY++D ++ +A + KK+ + + R E
Sbjct: 60 KKTAKKSRVKCFLKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVAACKSAKARLE 119
Query: 382 ERYKSGKNKWFFQKLRF 432
+R+K+GKN+WFF KLRF
Sbjct: 120 DRFKTGKNRWFFTKLRF 136
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 37.1 bits (82), Expect = 0.008
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 4 TRTEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 123
TR P+K+ + PG V+++L+GRY G++ + +K G
Sbjct: 63 TRKANPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSG 102
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 30.3 bits (65), Expect = 0.88
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 386 LSSKRTLVLKRSFLRLAGSFRSFALNFSKL 297
L +++ RSFL LAG +R F NFSK+
Sbjct: 495 LKQPKSVTQVRSFLGLAGYYRRFIKNFSKI 524
>10_02_0059 + 4785858-4786988
Length = 376
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1
Query: 374 RTLVLKRSFLRLAGSFRSFALNFSKL 297
+T+ RSFL LAG +R F NFSK+
Sbjct: 218 KTVTQIRSFLGLAGYYRRFIENFSKI 243
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1
Query: 374 RTLVLKRSFLRLAGSFRSFALNFSKL 297
+T+ RSFL LAG +R F NFSK+
Sbjct: 275 KTVTQIRSFLGLAGYYRRFIENFSKI 300
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1
Query: 374 RTLVLKRSFLRLAGSFRSFALNFSKL 297
+T+ RSFL LAG +R F NFSK+
Sbjct: 405 KTVTQIRSFLGLAGYYRRFIENFSKI 430
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1
Query: 374 RTLVLKRSFLRLAGSFRSFALNFSKL 297
+T+ RSFL LAG +R F NFSK+
Sbjct: 788 KTVTQIRSFLGLAGYYRRFIENFSKI 813
>10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 356 RSFLRLAGSFRSFALNFSKL 297
RSFL LAG +R F NFSK+
Sbjct: 954 RSFLGLAGYYRRFIENFSKI 973
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 356 RSFLRLAGSFRSFALNFSKL 297
RSFL LAG +R F NFSK+
Sbjct: 453 RSFLGLAGYYRRFIENFSKI 472
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 356 RSFLRLAGSFRSFALNFSKL 297
RSFL LAG +R F NFSK+
Sbjct: 985 RSFLGLAGYYRRFIENFSKI 1004
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 356 RSFLRLAGSFRSFALNFSKL 297
RSFL LAG +R F NFSK+
Sbjct: 1071 RSFLGLAGYYRRFIENFSKI 1090
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 28 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 123
M + PG V+++L+GR+ G++ + +K G
Sbjct: 94 MRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 125
>08_01_0775 - 7531397-7531564,7531590-7532771
Length = 449
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 374 RTLVLKRSFLRLAGSFRSFALNFSKL 297
+T+ R FL LAG +R F NFSK+
Sbjct: 84 KTVTQVRRFLGLAGYYRRFIENFSKI 109
>08_02_1498 +
27553449-27553730,27553834-27553946,27554063-27554129,
27554310-27554402,27554516-27554659,27554860-27554954,
27555120-27555412,27555514-27555632,27555742-27556094,
27556177-27556286,27556403-27556512,27556802-27557671
Length = 882
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 67 LSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKVHKRMGKNKI 216
L R AG + ++ + GT D V G+D R+VH G +
Sbjct: 599 LEHRMAGVYTVTIRGLNTGTLDLTTNGWGHVVGLDGERRRVHSEQGMGAV 648
>03_05_0527 +
25220375-25221425,25221513-25222182,25222347-25222440,
25222688-25222870
Length = 665
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1
Query: 374 RTLVLKRSFLRLAGSFRSFALNFSKL 297
+T+ RSFL LAG +R F NFS++
Sbjct: 635 KTVSQIRSFLGLAGYYRRFIENFSRI 660
>11_04_0118 + 13624086-13625120
Length = 344
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 64 VLSGRYAGRKAIVVKNYDEGTSDKPYGHAXSVAGIDRYPRKV 189
V S RY G K+ V N ++GTS H S+ G + P +
Sbjct: 295 VYSVRYLGDKSFTVSNVEDGTS-----HVHSIHGAEASPDSI 331
>04_04_0805 + 28184394-28185239
Length = 281
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 220 CEFYFFPSFYEPCAGICRCRRRXKHVRMVCQMCPR 116
C+F+ F + C +RR H+ +C +C +
Sbjct: 141 CKFFMFCAMKNACLTADNLQRRGWHLAPICHLCSK 175
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 165 HRQIPAQGS*KDGKK*NSQAVENQAFRKRCKLQSSN 272
H+Q + GS DG NS + N+A +KR K+ SS+
Sbjct: 418 HQQAQSIGSMLDGSIPNSFGLANRASKKRKKIVSSS 453
>10_04_0007 +
7439378-7439677,7439873-7440308,7440483-7440593,
7440633-7440762,7440798-7441512
Length = 563
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 210 IFSHPFMNLARVSVDAGDG 154
I HPF++ AR ++D G G
Sbjct: 477 ILGHPFLSTARANIDVGTG 495
>06_03_0049 +
15961706-15962017,15962952-15963851,15964769-15964913,
15964969-15965705
Length = 697
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 210 IFSHPFMNLARVSVDAGDG 154
I HPF++ AR ++D G G
Sbjct: 288 ILGHPFLSTARANIDVGTG 306
>05_01_0055 -
390371-390457,390637-390715,390804-390856,390951-391105,
391216-391422,391518-391658,392044-392202,392296-392476,
393153-393252,393321-393470,393581-393705,394006-394096,
394364-394472,394558-394657,395143-395307,395401-395506,
395590-395894,396003-396241,397036-397114,397189-397327,
398004-398054,398316-398770,398961-399158,399199-399261,
400212-400436,400706-400988,401109-401170
Length = 1368
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 389 YLSSKRTLVLKRSFLRLAGSFRSFALNFSKLKSTE 285
Y S K L + L G+ R+F+ F KLKSTE
Sbjct: 267 YASPKYMLWIVGYILVAGGAIRNFSPAFGKLKSTE 301
>03_06_0508 +
34417540-34417649,34418239-34418338,34418445-34418478,
34418559-34418635,34418929-34419005,34419060-34419224,
34419306-34419420,34419546-34419650
Length = 260
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 264 IVVYTFYERLDFRPLVNFIFSH-PFMNLARVSVDAG 160
I+V T+ ERL+ +V IF H P +N + VD G
Sbjct: 14 IIVPTYNERLNVALIVYLIFKHLPDVNFEIIVVDDG 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,062,017
Number of Sequences: 37544
Number of extensions: 269970
Number of successful extensions: 799
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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