Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_M01
(552 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 32 0.32
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 28 5.1
Z82288-3|CAB05320.2| 484|Caenorhabditis elegans Hypothetical pr... 27 6.8
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 6.8
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 6.8
Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical pr... 27 9.0
AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein. 27 9.0
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 103 PKSSTTTGLAPPASCGFPRPSPGRRSTLWRVS 198
P SST T PP+S P P+P RRS ++ S
Sbjct: 171 PPSSTPTPTPPPSSSSSPTPTPLRRSPRFQTS 202
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 46 CNPSISSNKKTSTAGYRFFPKSSTTTGLAPPASCG 150
C P+ +SN TSTA F + T+ A PA G
Sbjct: 1130 CQPAKTSNPATSTASVTFSFNTGATSASAKPAGFG 1164
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 71 KKPPLLDIGFSQRAPRRPVLRHPHPADSHD 160
KKP L F ++ +PV+ P PAD +D
Sbjct: 21 KKPKTLKDEFGEKLDIKPVIVPPKPADEYD 50
>Z82288-3|CAB05320.2| 484|Caenorhabditis elegans Hypothetical
protein ZK896.5 protein.
Length = 484
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 19 ISSTIKTLFCNPSISSNKKTSTAGYRFFPKSSTTTGLAPPASCG 150
+SST+ C+PSI+ N + + F+P + + AP + G
Sbjct: 17 LSSTLADYTCSPSITINPPVNISNAWFYPNTWNDSLPAPTYAAG 60
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 53 HPSVQIKKPPLLDIGFSQRAPRRPVLRHPHPADSHDLH 166
HPS Q PP + Q +P+ + P PA SH H
Sbjct: 1235 HPSYQAPAPPPA-LSVFQHSPQGAPITAPPPASSHHEH 1271
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 53 HPSVQIKKPPLLDIGFSQRAPRRPVLRHPHPADSHDLH 166
HPS Q PP + Q +P+ + P PA SH H
Sbjct: 1255 HPSYQAPAPPPA-LSVFQHSPQGAPITAPPPASSHHEH 1291
>Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical
protein F11C3.2 protein.
Length = 598
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 94 RFFPKSSTTTGLAPPASCGFPRPSPGRRSTLWRVSLLR 207
+F P T G PP P PGR L R S +R
Sbjct: 202 KFVPFEPTPPGFGPPDGWAPGMPKPGRTRKLPRYSTVR 239
>Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 125 PVVVELFGKNLYPAVEVFLFELMDGLQNNVL 33
PVV L KNL A EV+ F L+DG+ +L
Sbjct: 71 PVVFTLTSKNLLNASEVY-FGLIDGMTGRLL 100
>Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 125 PVVVELFGKNLYPAVEVFLFELMDGLQNNVL 33
PVV L KNL A EV+ F L+DG+ +L
Sbjct: 71 PVVFTLTSKNLLNASEVY-FGLIDGMTGRLL 100
>AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein.
Length = 598
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 94 RFFPKSSTTTGLAPPASCGFPRPSPGRRSTLWRVSLLR 207
+F P T G PP P PGR L R S +R
Sbjct: 202 KFVPFEPTPPGFGPPDGWAPGMPKPGRTRKLPRYSTVR 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,587,256
Number of Sequences: 27780
Number of extensions: 261926
Number of successful extensions: 716
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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