Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L24
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20285-1|AAC50906.2| 500|Homo sapiens Gps1 protein. 181 2e-45
BC064503-1|AAH64503.1| 527|Homo sapiens G protein pathway suppr... 181 2e-45
BC000155-1|AAH00155.3| 491|Homo sapiens G protein pathway suppr... 179 6e-45
BT009834-1|AAP88836.1| 475|Homo sapiens G protein pathway suppr... 173 5e-43
AK093283-1|BAC04120.1| 549|Homo sapiens protein ( Homo sapiens ... 73 8e-13
AB209596-1|BAD92833.1| 284|Homo sapiens G protein pathway suppr... 73 8e-13
X53587-1|CAA37656.1| 1822|Homo sapiens integrin beta 4 protein p... 30 5.5
X52186-1|CAA36433.1| 1805|Homo sapiens integrin beta 4 subunit p... 30 5.5
X51841-1|CAA36134.1| 1752|Homo sapiens protein ( Human mRNA for ... 30 5.5
U66541-3|AAC51632.1| 1752|Homo sapiens beta4-integrin protein. 30 5.5
U66541-2|AAC51634.1| 1805|Homo sapiens beta4-integrin protein. 30 5.5
U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein. 30 5.5
BC126411-1|AAI26412.1| 1752|Homo sapiens integrin, beta 4 protein. 30 5.5
BC118916-1|AAI18917.1| 1752|Homo sapiens ITGB4 protein protein. 30 5.5
BC109238-1|AAI09239.1| 644|Homo sapiens ITGB4 protein protein. 30 5.5
AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein. 30 5.5
AF011375-1|AAB65421.1| 964|Homo sapiens integrin variant beta4E... 30 5.5
AB208913-1|BAD92150.1| 1515|Homo sapiens integrin beta 4 isoform... 30 5.5
>U20285-1|AAC50906.2| 500|Homo sapiens Gps1 protein.
Length = 500
Score = 181 bits (440), Expect = 2e-45
Identities = 88/151 (58%), Positives = 111/151 (73%), Gaps = 4/151 (2%)
Frame = +3
Query: 168 AAEPMQVDV-PLEDNENNETECYLVENPTLDLETYAASYTGFAKLYRLMFVADHCPSLRM 344
A EPMQ+DV P ED +N Y+VENP+LDLE YAASY+G ++ RL F+ADHCP+LR+
Sbjct: 26 AVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRV 85
Query: 345 EALKMAISYVMSTYNVSLYQTLHKKLAEAV-ATAGLPDVAGSQDI--PVLDTMWVESKTK 515
EALKMA+S+V T+NV +Y+ +H+KL+EA PD + P LDT WVE+ K
Sbjct: 86 EALKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRK 145
Query: 516 KAAIKLEKLDTDLRNYKTNSIEESIRRGPDD 608
KA +KLEKLDTDL+NYK NSI+ESIRRG DD
Sbjct: 146 KALLKLEKLDTDLKNYKGNSIKESIRRGHDD 176
>BC064503-1|AAH64503.1| 527|Homo sapiens G protein pathway
suppressor 1 protein.
Length = 527
Score = 181 bits (440), Expect = 2e-45
Identities = 88/151 (58%), Positives = 111/151 (73%), Gaps = 4/151 (2%)
Frame = +3
Query: 168 AAEPMQVDV-PLEDNENNETECYLVENPTLDLETYAASYTGFAKLYRLMFVADHCPSLRM 344
A EPMQ+DV P ED +N Y+VENP+LDLE YAASY+G ++ RL F+ADHCP+LR+
Sbjct: 53 AVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRV 112
Query: 345 EALKMAISYVMSTYNVSLYQTLHKKLAEAV-ATAGLPDVAGSQDI--PVLDTMWVESKTK 515
EALKMA+S+V T+NV +Y+ +H+KL+EA PD + P LDT WVE+ K
Sbjct: 113 EALKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRK 172
Query: 516 KAAIKLEKLDTDLRNYKTNSIEESIRRGPDD 608
KA +KLEKLDTDL+NYK NSI+ESIRRG DD
Sbjct: 173 KALLKLEKLDTDLKNYKGNSIKESIRRGHDD 203
>BC000155-1|AAH00155.3| 491|Homo sapiens G protein pathway
suppressor 1 protein.
Length = 491
Score = 179 bits (436), Expect = 6e-45
Identities = 88/155 (56%), Positives = 113/155 (72%), Gaps = 8/155 (5%)
Frame = +3
Query: 168 AAEPMQVDV-PLEDNENNETECYLVENPTLDLETYAASYTGFAKLYRLMFVADHCPSLRM 344
A EPMQ+DV P ED +N Y+VENP+LDLE YAASY+G ++ RL F+ADHCP+LR+
Sbjct: 13 AVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRV 72
Query: 345 EALKMAISYVMSTYNVSLYQTLHKKLAEAVATA-----GLPDVAGSQDI--PVLDTMWVE 503
EALKMA+S+V T+NV +Y+ +H+KL+EA ++ PD + P LDT WVE
Sbjct: 73 EALKMALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESGVEPPALDTAWVE 132
Query: 504 SKTKKAAIKLEKLDTDLRNYKTNSIEESIRRGPDD 608
+ KKA +KLEKLDTDL+NYK NSI+ESIRRG DD
Sbjct: 133 ATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDD 167
>BT009834-1|AAP88836.1| 475|Homo sapiens G protein pathway
suppressor 1 protein.
Length = 475
Score = 173 bits (420), Expect = 5e-43
Identities = 85/151 (56%), Positives = 110/151 (72%), Gaps = 8/151 (5%)
Frame = +3
Query: 180 MQVDV-PLEDNENNETECYLVENPTLDLETYAASYTGFAKLYRLMFVADHCPSLRMEALK 356
MQ+DV P ED +N Y+VENP+LDLE YAASY+G ++ RL F+ADHCP+LR+EALK
Sbjct: 1 MQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALK 60
Query: 357 MAISYVMSTYNVSLYQTLHKKLAEAVATA-----GLPDVAGSQDI--PVLDTMWVESKTK 515
MA+S+V T+NV +Y+ +H+KL+EA ++ PD + P LDT WVE+ K
Sbjct: 61 MALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESGVEPPALDTAWVEATRK 120
Query: 516 KAAIKLEKLDTDLRNYKTNSIEESIRRGPDD 608
KA +KLEKLDTDL+NYK NSI+ESIRRG DD
Sbjct: 121 KALLKLEKLDTDLKNYKGNSIKESIRRGHDD 151
>AK093283-1|BAC04120.1| 549|Homo sapiens protein ( Homo sapiens
cDNA FLJ35964 fis, clone TESTI2012592, highly similar to
G PROTEIN PATHWAY SUPPRESSOR 1. ).
Length = 549
Score = 72.9 bits (171), Expect = 8e-13
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +3
Query: 477 PVLDTMWVESKTKKAAIKLEKLDTDLRNYKTNSIEESIRRGPDD 608
P LDT WVE+ KKA +KLEKLDTDL+NYK NSI+ESIRRG DD
Sbjct: 109 PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDD 152
>AB209596-1|BAD92833.1| 284|Homo sapiens G protein pathway
suppressor 1 isoform 2 variant protein.
Length = 284
Score = 72.9 bits (171), Expect = 8e-13
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +3
Query: 477 PVLDTMWVESKTKKAAIKLEKLDTDLRNYKTNSIEESIRRGPDD 608
P LDT WVE+ KKA +KLEKLDTDL+NYK NSI+ESIRRG DD
Sbjct: 45 PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDD 88
>X53587-1|CAA37656.1| 1822|Homo sapiens integrin beta 4 protein
protein.
Length = 1822
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 533 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 571
>X52186-1|CAA36433.1| 1805|Homo sapiens integrin beta 4 subunit
protein.
Length = 1805
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 533 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 571
>X51841-1|CAA36134.1| 1752|Homo sapiens protein ( Human mRNA for
integrin beta(4)subunit. ).
Length = 1752
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 533 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 571
>U66541-3|AAC51632.1| 1752|Homo sapiens beta4-integrin protein.
Length = 1752
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 533 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 571
>U66541-2|AAC51634.1| 1805|Homo sapiens beta4-integrin protein.
Length = 1805
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 533 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 571
>U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein.
Length = 1822
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 533 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 571
>BC126411-1|AAI26412.1| 1752|Homo sapiens integrin, beta 4 protein.
Length = 1752
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 533 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 571
>BC118916-1|AAI18917.1| 1752|Homo sapiens ITGB4 protein protein.
Length = 1752
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 533 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 571
>BC109238-1|AAI09239.1| 644|Homo sapiens ITGB4 protein protein.
Length = 644
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 450 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 488
>AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein.
Length = 1873
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 532 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 570
>AF011375-1|AAB65421.1| 964|Homo sapiens integrin variant beta4E
protein.
Length = 964
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 533 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 571
>AB208913-1|BAD92150.1| 1515|Homo sapiens integrin beta 4 isoform 3
precursor variant protein.
Length = 1515
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 GYFLRYVNIQCKPLPNTSQKTC*SSGYCRLARCSRITGYTCP 484
G F Y N QC P TS C G C + +C G+T P
Sbjct: 565 GQFCEYDNFQC---PRTSGFLCNDRGRCSMGQCVCEPGWTGP 603
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,010,380
Number of Sequences: 237096
Number of extensions: 1764730
Number of successful extensions: 2857
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2850
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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