Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L24
(610 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p pro... 122 2e-43
AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA... 122 2e-43
AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9 signalo... 120 5e-43
BT022388-1|AAY54804.1| 364|Drosophila melanogaster IP11532p pro... 71 2e-12
AE014134-2521|AAF53409.1| 364|Drosophila melanogaster CG4697-PA... 71 2e-12
>AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p
protein.
Length = 525
Score = 122 bits (294), Expect(2) = 2e-43
Identities = 56/90 (62%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = +3
Query: 165 NAAEPMQVDV--PLEDNENNETECYLVENPTLDLETYAASYTGFAKLYRLMFVADHCPSL 338
NA EPMQVD+ P EDNENNE + +VENP++DLE YA Y G +L+RL++VAD CP L
Sbjct: 12 NAVEPMQVDIAPPNEDNENNEEQQIVVENPSIDLEVYANQYAGIVRLHRLIYVADVCPVL 71
Query: 339 RMEALKMAISYVMSTYNVSLYQTLHKKLAE 428
+EALKMAI+YV +TYNV+LYQ LHK+L++
Sbjct: 72 AVEALKMAITYVQTTYNVNLYQVLHKRLSD 101
Score = 72.5 bits (170), Expect(2) = 2e-43
Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +3
Query: 423 AEAVATA-GLPDVAGSQDIPVLDTMWVESKTKKAAIKLEKLDTDLRNYKTNSIEESIRRG 599
A+ VA A G A +D D WV++K KKAA+KLEKLD+DL+NYK+NSI+ESIRRG
Sbjct: 137 AQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNSIKESIRRG 196
Query: 600 PDD 608
DD
Sbjct: 197 HDD 199
>AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA
protein.
Length = 525
Score = 122 bits (294), Expect(2) = 2e-43
Identities = 56/90 (62%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = +3
Query: 165 NAAEPMQVDV--PLEDNENNETECYLVENPTLDLETYAASYTGFAKLYRLMFVADHCPSL 338
NA EPMQVD+ P EDNENNE + +VENP++DLE YA Y G +L+RL++VAD CP L
Sbjct: 12 NAVEPMQVDIAPPNEDNENNEEQQIVVENPSIDLEVYANQYAGIVRLHRLIYVADVCPVL 71
Query: 339 RMEALKMAISYVMSTYNVSLYQTLHKKLAE 428
+EALKMAI+YV +TYNV+LYQ LHK+L++
Sbjct: 72 AVEALKMAITYVQTTYNVNLYQVLHKRLSD 101
Score = 72.5 bits (170), Expect(2) = 2e-43
Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +3
Query: 423 AEAVATA-GLPDVAGSQDIPVLDTMWVESKTKKAAIKLEKLDTDLRNYKTNSIEESIRRG 599
A+ VA A G A +D D WV++K KKAA+KLEKLD+DL+NYK+NSI+ESIRRG
Sbjct: 137 AQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNSIKESIRRG 196
Query: 600 PDD 608
DD
Sbjct: 197 HDD 199
>AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9
signalosome subunit 1 CSN1 protein.
Length = 525
Score = 120 bits (290), Expect(2) = 5e-43
Identities = 55/90 (61%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = +3
Query: 165 NAAEPMQVDV--PLEDNENNETECYLVENPTLDLETYAASYTGFAKLYRLMFVADHCPSL 338
NA EPMQVD+ P EDNENNE + +VENP++DLE +A Y G +L+RL++VAD CP L
Sbjct: 12 NAVEPMQVDIAPPNEDNENNEEQQIVVENPSIDLEVFANQYAGIVRLHRLIYVADVCPVL 71
Query: 339 RMEALKMAISYVMSTYNVSLYQTLHKKLAE 428
+EALKMAI+YV +TYNV+LYQ LHK+L++
Sbjct: 72 AVEALKMAITYVQTTYNVNLYQVLHKRLSD 101
Score = 72.5 bits (170), Expect(2) = 5e-43
Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +3
Query: 423 AEAVATA-GLPDVAGSQDIPVLDTMWVESKTKKAAIKLEKLDTDLRNYKTNSIEESIRRG 599
A+ VA A G A +D D WV++K KKAA+KLEKLD+DL+NYK+NSI+ESIRRG
Sbjct: 137 AQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNSIKESIRRG 196
Query: 600 PDD 608
DD
Sbjct: 197 HDD 199
>BT022388-1|AAY54804.1| 364|Drosophila melanogaster IP11532p
protein.
Length = 364
Score = 70.5 bits (165), Expect = 2e-12
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 18/137 (13%)
Frame = +3
Query: 240 ENPTLDLETYAASYTGFAKLYRLMFVADHCPSLRMEALKMAISYVMSTYNVSLYQTLHKK 419
E L L +YA YT +L RL F+A CP L + AL++A+++V +TYNV LY L+K
Sbjct: 5 EETMLHLPSYADRYTDIPRLIRLKFIAQVCPELSVLALELALNHVKTTYNVKLYDELYKT 64
Query: 420 LA--------------EAVATAG--LPDVAGSQDIPVL--DTMWVESKTKKAAIKLEKLD 545
L E + T G P + + V+ D+ WVE +A + L++LD
Sbjct: 65 LCVEVDRKYPNQSKGNEELHTTGGSEPSTSSGRGRVVVPYDSYWVEDNIMEATLMLQELD 124
Query: 546 TDLRNYKTNSIEESIRR 596
+L K+NS +RR
Sbjct: 125 AELNFKKSNSGSSYVRR 141
>AE014134-2521|AAF53409.1| 364|Drosophila melanogaster CG4697-PA
protein.
Length = 364
Score = 70.5 bits (165), Expect = 2e-12
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 18/137 (13%)
Frame = +3
Query: 240 ENPTLDLETYAASYTGFAKLYRLMFVADHCPSLRMEALKMAISYVMSTYNVSLYQTLHKK 419
E L L +YA YT +L RL F+A CP L + AL++A+++V +TYNV LY L+K
Sbjct: 5 EETMLHLPSYADRYTDIPRLIRLKFIAQVCPELSVLALELALNHVKTTYNVKLYDELYKT 64
Query: 420 LA--------------EAVATAG--LPDVAGSQDIPVL--DTMWVESKTKKAAIKLEKLD 545
L E + T G P + + V+ D+ WVE +A + L++LD
Sbjct: 65 LCVEVDRKYPNQSKGNEELHTTGGSEPSTSSGRGRVVVPYDSYWVEDNIMEATLMLQELD 124
Query: 546 TDLRNYKTNSIEESIRR 596
+L K+NS +RR
Sbjct: 125 AELNFKKSNSGSSYVRR 141
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,392,174
Number of Sequences: 53049
Number of extensions: 554046
Number of successful extensions: 1323
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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