Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L24
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132895-1|CAC14399.1| 601|Caenorhabditis elegans Hypothetical ... 64 7e-11
Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 30 1.1
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 28 6.0
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 28 6.0
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 28 6.0
U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose 6-pho... 28 6.0
U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose 6-pho... 28 6.0
AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative treh... 28 6.0
AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans trehalose-6-p... 28 6.0
AF025454-7|AAC71154.3| 367|Caenorhabditis elegans Hypothetical ... 27 7.9
>AL132895-1|CAC14399.1| 601|Caenorhabditis elegans Hypothetical
protein Y59A8A.1 protein.
Length = 601
Score = 64.1 bits (149), Expect = 7e-11
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Frame = +3
Query: 165 NAAEPMQVDVPLEDNENNETECY--LVENPTLDLETYAASYTGFAKLYRLMFVADHCPSL 338
N A PM + +D + + Y V +D+E+ A SY A R F+A HCP L
Sbjct: 53 NPAIPMHLIEKRDDRRESCDDGYSLTVNESAIDIESLACSYDSNAFFLRARFIARHCPIL 112
Query: 339 RMEALKMAISYVMS-TYNVSLYQTLHKKLAEAVATAGLPDVAGSQDIPVLDTMWVESKTK 515
R +A I+Y+ T +++ Y +L +A + + IP+ D W+E
Sbjct: 113 RADAYISLINYLKEHTTDITHYVAFFNELESELARKEFKNRQLNFQIPLRDQKWIEENGA 172
Query: 516 KAAIKLEKLDTDLRNYKTNSIEESIRRGPDD 608
++L + + +K ++ES RR +D
Sbjct: 173 TWQSTTDQLQAEYKRHKDEGVKESTRRAMED 203
>Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical protein
F13D2.1 protein.
Length = 1342
Score = 37.9 bits (84), Expect = 0.006
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = +3
Query: 180 MQVDVPLEDNENNETECYLVENPTL-DLETYAASYTGF-AKLYRLMFVADHCPSLRMEAL 353
+ +D ++DN ++T C+ V NPT+ L+ + +YT F A +L F+ D + +
Sbjct: 1040 LSIDQKVQDNFVHQTVCFNVSNPTIKTLDIFHGTYTLFTATPDQLYFLNDSYTPINPSSS 1099
Query: 354 KMAISYVMSTYNVSLYQTLHKKLAEAVATAGLPDVAGSQDIPVLDT 491
+ + ++++ N+ QTL K+A + + G S +P+ T
Sbjct: 1100 ALGLHFIIT--NIVSNQTLCYKVALSESRGGKNIPYKSAPVPIRAT 1143
>Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical protein
F13D2.1 protein.
Length = 1342
Score = 37.9 bits (84), Expect = 0.006
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = +3
Query: 180 MQVDVPLEDNENNETECYLVENPTL-DLETYAASYTGF-AKLYRLMFVADHCPSLRMEAL 353
+ +D ++DN ++T C+ V NPT+ L+ + +YT F A +L F+ D + +
Sbjct: 1040 LSIDQKVQDNFVHQTVCFNVSNPTIKTLDIFHGTYTLFTATPDQLYFLNDSYTPINPSSS 1099
Query: 354 KMAISYVMSTYNVSLYQTLHKKLAEAVATAGLPDVAGSQDIPVLDT 491
+ + ++++ N+ QTL K+A + + G S +P+ T
Sbjct: 1100 ALGLHFIIT--NIVSNQTLCYKVALSESRGGKNIPYKSAPVPIRAT 1143
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = -3
Query: 263 LQIQGGVLY*ITLCFIVLIV-LKWDVNLHRFSCIHFEHFSSLEFDISENNRIPLLT*KTN 87
L G LY LC I L+V + + F C H+ + + L+F + IP L+ N
Sbjct: 464 LGFSSGYLYGTVLCQIFLLVNIALIILSFLFICAHYPNNTPLDFKVPLVPLIPALSLLIN 523
Query: 86 SLELY*ML----IRTVIY*KNTFIITFLFG 9
+L + + +R V++ F+I F +G
Sbjct: 524 TLMMVHLAWITWLRLVVWMSIGFVIYFGYG 553
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 339 RMEALKMAISYVMSTYNVSLYQTLHKKLAEAVATAGLPDVAGSQDIPVLDTMWVESKTKK 518
R++ L +++ST + H+K+AEA A D+ GS + E +K
Sbjct: 536 RVDDLMNVSGHLLSTAEIESALVAHEKVAEAAVVAAPHDIKGSFPYAFVTLNVGERINEK 595
Query: 519 AAIKLEKL 542
+L+KL
Sbjct: 596 LVAELKKL 603
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 339 RMEALKMAISYVMSTYNVSLYQTLHKKLAEAVATAGLPDVAGSQDIPVLDTMWVESKTKK 518
R++ L +++ST + H+K+AEA A D+ GS + E +K
Sbjct: 546 RVDDLMNVSGHLLSTAEIESALVAHEKVAEAAVVAAPHDIKGSFPYAFVTLNVGERINEK 605
Query: 519 AAIKLEKL 542
+L+KL
Sbjct: 606 LVAELKKL 613
>Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 27.9 bits (59), Expect = 6.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +3
Query: 294 KLYRLMFVADHCPSLRMEALKMAISYVMSTYNVSLYQTLHKKL-AEAVATAGLPDVAGSQ 470
K R + V HCPS+ +++ MA +YN+ QTL K+ ++ AG+P
Sbjct: 138 KSMRHLDVQMHCPSVIRDSVAMASVIAQCSYNL---QTLDLKIRSDNAKYAGIP-----S 189
Query: 471 DIPVLDTMWVESKTKKAAIKLEKLDTD 551
D+ + V + + A KL KL D
Sbjct: 190 DVKIRRN--VMTSINENATKLRKLHID 214
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 27.9 bits (59), Expect = 6.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +3
Query: 294 KLYRLMFVADHCPSLRMEALKMAISYVMSTYNVSLYQTLHKKL-AEAVATAGLPDVAGSQ 470
K R + V HCPS+ +++ MA +YN+ QTL K+ ++ AG+P
Sbjct: 138 KSMRHLDVQMHCPSVIRDSVAMASVIAQCSYNL---QTLDLKIRSDNAKYAGIP-----S 189
Query: 471 DIPVLDTMWVESKTKKAAIKLEKLDTD 551
D+ + V + + A KL KL D
Sbjct: 190 DVKIRRN--VMTSINENATKLRKLHID 214
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 27.9 bits (59), Expect = 6.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +3
Query: 294 KLYRLMFVADHCPSLRMEALKMAISYVMSTYNVSLYQTLHKKL-AEAVATAGLPDVAGSQ 470
K R + V HCPS+ +++ MA +YN+ QTL K+ ++ AG+P
Sbjct: 36 KSMRHLDVQMHCPSVIRDSVAMASVIAQCSYNL---QTLDLKIRSDNAKYAGIP-----S 87
Query: 471 DIPVLDTMWVESKTKKAAIKLEKLDTD 551
D+ + V + + A KL KL D
Sbjct: 88 DVKIRRN--VMTSINENATKLRKLHID 112
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 27.9 bits (59), Expect = 6.0
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +3
Query: 294 KLYRLMFVADHCPSLRMEALKMAISYVMSTYNVSLYQTLHKKL-AEAVATAGLPDVAGSQ 470
K R + V HCPS+ +++ MA +YN+ QTL K+ ++ AG+P
Sbjct: 138 KSMRHLDVQMHCPSVIRDSVAMASVIAQCSYNL---QTLDLKIRSDNAKYAGIP-----S 189
Query: 471 DIPVLDTMWVESKTKKAAIKLEKLDTD 551
D+ + V + + A KL KL D
Sbjct: 190 DVKIRRN--VMTSINENATKLRKLHID 214
>U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform b protein.
Length = 1294
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 105 QWNPIIFTYIKFQRRKMFEMNAAEPMQVDVPLEDNENNETECYLVENPTLDL 260
+W P+IF R ++ A + V P +D N + LV NPT L
Sbjct: 698 EWKPVIFETDGLPRTRLIAHYLAMDIGVVTPSKDGMNLVAKEMLVCNPTASL 749
>U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform a protein.
Length = 1331
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 105 QWNPIIFTYIKFQRRKMFEMNAAEPMQVDVPLEDNENNETECYLVENPTLDL 260
+W P+IF R ++ A + V P +D N + LV NPT L
Sbjct: 735 EWKPVIFETDGLPRTRLIAHYLAMDIGVVTPSKDGMNLVAKEMLVCNPTASL 786
>AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative
trehalose 6-phosphatesynthase protein.
Length = 1331
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 105 QWNPIIFTYIKFQRRKMFEMNAAEPMQVDVPLEDNENNETECYLVENPTLDL 260
+W P+IF R ++ A + V P +D N + LV NPT L
Sbjct: 735 EWKPVIFETDGLPRTRLIAHYLAMDIGVVTPSKDGMNLVAKEMLVCNPTASL 786
>AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans
trehalose-6-phosphate synthase protein.
Length = 1331
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 105 QWNPIIFTYIKFQRRKMFEMNAAEPMQVDVPLEDNENNETECYLVENPTLDL 260
+W P+IF R ++ A + V P +D N + LV NPT L
Sbjct: 735 EWKPVIFETDGLPRTRLIAHYLAMDIGVVTPSKDGMNLVAKEMLVCNPTASL 786
>AF025454-7|AAC71154.3| 367|Caenorhabditis elegans Hypothetical
protein F34D6.4 protein.
Length = 367
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 539 FLQFYSSFFGFRFYPHSVKDRYIL*SCYIWQ 447
FL F+S F+ F+ Y +VKD +I + + W+
Sbjct: 45 FLFFFSIFYVFKMYVQNVKD-HITFAVFFWK 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,922,897
Number of Sequences: 27780
Number of extensions: 299109
Number of successful extensions: 790
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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