Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L23
(585 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118958-1|AAM50818.1| 247|Drosophila melanogaster LD37839p pro... 214 8e-56
AE014134-1941|AAF53000.1| 247|Drosophila melanogaster CG6750-PA... 214 8e-56
L31626-1|AAA21800.1| 416|Drosophila melanogaster homeodomain-co... 31 1.1
BT029256-1|ABK30893.1| 416|Drosophila melanogaster FI01103p pro... 31 1.1
AE013599-403|AAF59260.1| 416|Drosophila melanogaster CG11121-PA... 31 1.1
BT006007-1|AAO74690.1| 528|Drosophila melanogaster RE18708p pro... 31 1.5
AY060891-1|AAL28439.1| 528|Drosophila melanogaster GM04645p pro... 31 1.5
AE014297-1243|AAF54591.1| 528|Drosophila melanogaster CG18578-P... 31 1.5
AY069500-1|AAL39645.1| 862|Drosophila melanogaster LD22456p pro... 29 3.5
AE014298-578|AAF45907.1| 862|Drosophila melanogaster CG2938-PB ... 29 3.5
BT021292-1|AAX33440.1| 416|Drosophila melanogaster RE27549p pro... 29 6.1
AE013599-3395|AAF46845.1| 416|Drosophila melanogaster CG5821-PA... 29 6.1
>AY118958-1|AAM50818.1| 247|Drosophila melanogaster LD37839p
protein.
Length = 247
Score = 214 bits (522), Expect = 8e-56
Identities = 98/134 (73%), Positives = 115/134 (85%)
Frame = +2
Query: 137 MAELLLDPNIRVWVFLPIVIITFLVGIVRHYVSIILSSQKKIELLQVQDSQVMIRARLLR 316
M ELL+DP+IRVWVFLPIV+ITFLVGIVRHYVSI++S+QKK E+ Q+QDSQ MIRARLLR
Sbjct: 1 MTELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDSQAMIRARLLR 60
Query: 317 ENGKYLPRQSFAMRRHWFNNEETGYFKVQKRTATSQNPMTDPGMMTDMLKGNVTNVLPMI 496
ENGKYL QSF+MR+++FNNEETGYFK QKR +QN M+TDM+KGN NVLPM+
Sbjct: 61 ENGKYLSAQSFSMRKNYFNNEETGYFKTQKRAPVAQN---SSAMLTDMVKGNFINVLPMV 117
Query: 497 VIGGWINWMFSGLL 538
VIGGWINWMFSG +
Sbjct: 118 VIGGWINWMFSGFV 131
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 534 YFTTKVPFPLTLRFKPM 584
+ TTKVPFPLTLRFKPM
Sbjct: 130 FVTTKVPFPLTLRFKPM 146
>AE014134-1941|AAF53000.1| 247|Drosophila melanogaster CG6750-PA
protein.
Length = 247
Score = 214 bits (522), Expect = 8e-56
Identities = 98/134 (73%), Positives = 115/134 (85%)
Frame = +2
Query: 137 MAELLLDPNIRVWVFLPIVIITFLVGIVRHYVSIILSSQKKIELLQVQDSQVMIRARLLR 316
M ELL+DP+IRVWVFLPIV+ITFLVGIVRHYVSI++S+QKK E+ Q+QDSQ MIRARLLR
Sbjct: 1 MTELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDSQAMIRARLLR 60
Query: 317 ENGKYLPRQSFAMRRHWFNNEETGYFKVQKRTATSQNPMTDPGMMTDMLKGNVTNVLPMI 496
ENGKYL QSF+MR+++FNNEETGYFK QKR +QN M+TDM+KGN NVLPM+
Sbjct: 61 ENGKYLSAQSFSMRKNYFNNEETGYFKTQKRAPVAQN---SSAMLTDMVKGNFINVLPMV 117
Query: 497 VIGGWINWMFSGLL 538
VIGGWINWMFSG +
Sbjct: 118 VIGGWINWMFSGFV 131
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 534 YFTTKVPFPLTLRFKPM 584
+ TTKVPFPLTLRFKPM
Sbjct: 130 FVTTKVPFPLTLRFKPM 146
>L31626-1|AAA21800.1| 416|Drosophila melanogaster
homeodomain-containing protein protein.
Length = 416
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 296 IRARLLRENGKYLPRQSFAMRRHWFNNEETGY-FKVQKRTAT----SQNPMTDPGMMTDM 460
+R R L GKY R+ F + R ++ EET Y FK + R+ S NP P D+
Sbjct: 192 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDL 251
>BT029256-1|ABK30893.1| 416|Drosophila melanogaster FI01103p
protein.
Length = 416
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 296 IRARLLRENGKYLPRQSFAMRRHWFNNEETGY-FKVQKRTAT----SQNPMTDPGMMTDM 460
+R R L GKY R+ F + R ++ EET Y FK + R+ S NP P D+
Sbjct: 192 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDL 251
>AE013599-403|AAF59260.1| 416|Drosophila melanogaster CG11121-PA
protein.
Length = 416
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 296 IRARLLRENGKYLPRQSFAMRRHWFNNEETGY-FKVQKRTAT----SQNPMTDPGMMTDM 460
+R R L GKY R+ F + R ++ EET Y FK + R+ S NP P D+
Sbjct: 192 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDL 251
>BT006007-1|AAO74690.1| 528|Drosophila melanogaster RE18708p
protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +2
Query: 140 AELLLDPNIRVWVFLPIVIITFLVGIVR--HYV-SIILSSQKKIELLQVQDSQVMIRARL 310
AE P I + F I T LVG YV S +L ++ L++ +Q +
Sbjct: 149 AEHFKAPLIGLGTFGAISWNTDLVGSPSPPSYVPSALLKFSDRMSLVERVGNQAFLTYEY 208
Query: 311 LRENGKYLPRQSFAMRRHWFNNEETGYFKVQKRTA 415
+ N YLPRQ R+++ NN++ ++ ++K TA
Sbjct: 209 IFLNYFYLPRQEVLYRKYFPNNKQ-DFYDMRKNTA 242
>AY060891-1|AAL28439.1| 528|Drosophila melanogaster GM04645p
protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +2
Query: 140 AELLLDPNIRVWVFLPIVIITFLVGIVR--HYV-SIILSSQKKIELLQVQDSQVMIRARL 310
AE P I + F I T LVG YV S +L ++ L++ +Q +
Sbjct: 149 AEHFKAPLIGLGTFGAISWNTDLVGSPSPPSYVPSALLKFSDRMSLVERVGNQAFLTYEY 208
Query: 311 LRENGKYLPRQSFAMRRHWFNNEETGYFKVQKRTA 415
+ N YLPRQ R+++ NN++ ++ ++K TA
Sbjct: 209 IFLNYFYLPRQEVLYRKYFPNNKQ-DFYDMRKNTA 242
>AE014297-1243|AAF54591.1| 528|Drosophila melanogaster CG18578-PA
protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +2
Query: 140 AELLLDPNIRVWVFLPIVIITFLVGIVR--HYV-SIILSSQKKIELLQVQDSQVMIRARL 310
AE P I + F I T LVG YV S +L ++ L++ +Q +
Sbjct: 149 AEHFKAPLIGLGTFGAISWNTDLVGSPSPPSYVPSALLKFSDRMSLVERVGNQAFLTYEY 208
Query: 311 LRENGKYLPRQSFAMRRHWFNNEETGYFKVQKRTA 415
+ N YLPRQ R+++ NN++ ++ ++K TA
Sbjct: 209 IFLNYFYLPRQEVLYRKYFPNNKQ-DFYDMRKNTA 242
>AY069500-1|AAL39645.1| 862|Drosophila melanogaster LD22456p
protein.
Length = 862
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 142 RTSFRSKYTCMGVS-PYSYHYFLSRNSKTLCVDYFIFS 252
R +F S C ++ PY ++YF+ S LC+ YF+ +
Sbjct: 565 RANFLSVLLCFCMNRPYQFYYFVPLLSFWLCIVYFVLA 602
>AE014298-578|AAF45907.1| 862|Drosophila melanogaster CG2938-PB
protein.
Length = 862
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 142 RTSFRSKYTCMGVS-PYSYHYFLSRNSKTLCVDYFIFS 252
R +F S C ++ PY ++YF+ S LC+ YF+ +
Sbjct: 565 RANFLSVLLCFCMNRPYQFYYFVPLLSFWLCIVYFVLA 602
>BT021292-1|AAX33440.1| 416|Drosophila melanogaster RE27549p
protein.
Length = 416
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 314 RENGKYLPRQSFAMRRHWFNNEETGYFK 397
R G Y RQ F + H+ +NEET YF+
Sbjct: 296 RSGGNY--RQKFQQQSHYRHNEETVYFR 321
>AE013599-3395|AAF46845.1| 416|Drosophila melanogaster CG5821-PA
protein.
Length = 416
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 314 RENGKYLPRQSFAMRRHWFNNEETGYFK 397
R G Y RQ F + H+ +NEET YF+
Sbjct: 296 RSGGNY--RQKFQQQSHYRHNEETVYFR 321
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,931,715
Number of Sequences: 53049
Number of extensions: 517824
Number of successful extensions: 1054
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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