Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L22
(573 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 347 5e-98
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 25 0.40
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 5.0
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 5.0
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 5.0
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 6.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 6.6
AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 21 6.6
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 21 8.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.7
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 347 bits (853), Expect = 5e-98
Identities = 157/187 (83%), Positives = 172/187 (91%)
Frame = +1
Query: 13 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 192
MGISRDHWHKRRATGGKR PIRKKRK+ELGRPAANTKLGPQRIH VR+RGGN KYRALRL
Sbjct: 1 MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRL 60
Query: 193 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLP 372
DTGNF+WGSEC+TRKTRIIDVVYNASNNELVRTKTLVKNAIV +DATPFRQWYE HY+LP
Sbjct: 61 DTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLP 120
Query: 373 LGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPG 552
LGRK+GAKLTEAEE ++NKKRS+K KY +RQR +KVE LEEQF TGR+LAC++SRPG
Sbjct: 121 LGRKRGAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSRPG 180
Query: 553 QCGRADG 573
QCGR DG
Sbjct: 181 QCGREDG 187
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 25.4 bits (53), Expect = 0.40
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 535 HMLTAVQCGIAPPDHPLPWTGAACSGTS 452
H V + PP+ P+P +AC G++
Sbjct: 169 HQFQTVVASMDPPEPPVPTVTSACVGSA 196
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 264 IINNINNTSLAG 229
+INN NNTS+ G
Sbjct: 488 VINNRNNTSMKG 499
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 242 VLLMLFIMPLTMNWCVPKPW*RMLLSWWMPHL 337
VL + F P T N PW R + WMP L
Sbjct: 333 VLNVHFRSPSTHNM---SPWVRQVFLNWMPRL 361
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 244 YESCGLNIQIPMRSFQYQD 188
YE CGL + PM SFQ D
Sbjct: 653 YE-CGLRFEDPMISFQPGD 670
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.4 bits (43), Expect = 6.6
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +2
Query: 242 VLLMLFIMPLTMNWCVPKPW 301
+L+ +MPL + W + W
Sbjct: 85 LLVTFLMMPLEIGWAITVSW 104
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 382 KKGAKLTEAEEAIINKKRSQKTAKKY 459
KKG+ +T+ +I + ++K K+Y
Sbjct: 517 KKGSFVTQYVGEVITNEEAEKRGKEY 542
>AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein.
Length = 50
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 568 RRDRTDRADSPHMLTAVQCGIAPPDH 491
+R + + + M+ A+ C I P DH
Sbjct: 9 KRRKKNLNQNQMMIWALDCSIKPKDH 34
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 539 ATHANSRPVWNCSSRPPSTLDRR 471
A N+RPV+ RPP RR
Sbjct: 95 AEPGNNRPVYISQPRPPHPRLRR 117
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 539 ATHANSRPVWNCSSRPPSTLDRR 471
A N+RPV+ RPP RR
Sbjct: 151 AEPGNNRPVYISQPRPPHPRLRR 173
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 232 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 345
RK + +VVY N + + V + I ++ A+P ++
Sbjct: 358 RKRPMHNVVYRPGENPVTQRLPAVLSRIGIILASPLKR 395
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,093
Number of Sequences: 438
Number of extensions: 4246
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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