Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L20
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12017-3|CAA78049.1| 570|Caenorhabditis elegans Hypothetical pr... 64 9e-11
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 28 5.2
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 28 5.2
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 28 5.2
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 5.2
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 5.2
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 28 5.2
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 28 5.2
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 28 5.2
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 28 5.2
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 28 5.2
Z92785-2|CAB07200.1| 344|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81481-6|CAB63435.1| 344|Caenorhabditis elegans Hypothetical pr... 27 6.9
>Z12017-3|CAA78049.1| 570|Caenorhabditis elegans Hypothetical
protein R08D7.3 protein.
Length = 570
Score = 63.7 bits (148), Expect = 9e-11
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Frame = +1
Query: 49 IQDNPTGWGPCEMPDQFRD-MPYQPFSKGDRLGKISDWTVVQ------DKKYQNK-YASQ 204
+ DN GWGP + +P+Q F+K DR+G+++DW V +++Y + Y S
Sbjct: 11 LADNTVGWGPLASSSSADEPVPFQQFNKADRIGRVADWIGVDRFYRRGNERYNERVYGSA 70
Query: 205 FGAGSSYAYFHDEDESTFHLVDTTR 279
AGS + Y H DE F LVDT++
Sbjct: 71 ANAGSQFDYIHGMDEHNFQLVDTSK 95
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = +1
Query: 376 KQRDRKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGIKDGEDI 543
+Q R G R+G G K R SV VRP WV +E+M+ +KL+LP I G+DI
Sbjct: 157 RQGQRGQGGRFG--GDRPKERLPSVQVRPEWVVLEEMNLSAFSKLALPNIPGGDDI 210
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 97 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 276
F + +Q ++ + L + ++W V + + +G FH D+ TF +DT
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298
Query: 277 RVQKPP 294
Q PP
Sbjct: 299 PKQNPP 304
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 97 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 276
F + +Q ++ + L + ++W V + + +G FH D+ TF +DT
Sbjct: 230 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 288
Query: 277 RVQKPP 294
Q PP
Sbjct: 289 PKQNPP 294
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 97 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 276
F + +Q ++ + L + ++W V + + +G FH D+ TF +DT
Sbjct: 286 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 344
Query: 277 RVQKPP 294
Q PP
Sbjct: 345 PKQNPP 350
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 97 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 276
F + +Q ++ + L + ++W V + + +G FH D+ TF +DT
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298
Query: 277 RVQKPP 294
Q PP
Sbjct: 299 PKQNPP 304
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 97 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 276
F + +Q ++ + L + ++W V + + +G FH D+ TF +DT
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298
Query: 277 RVQKPP 294
Q PP
Sbjct: 299 PKQNPP 304
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 97 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 276
F + +Q ++ + L + ++W V + + +G FH D+ TF +DT
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298
Query: 277 RVQKPP 294
Q PP
Sbjct: 299 PKQNPP 304
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 97 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 276
F + +Q ++ + L + ++W V + + +G FH D+ TF +DT
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298
Query: 277 RVQKPP 294
Q PP
Sbjct: 299 PKQNPP 304
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 97 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 276
F + +Q ++ + L + ++W V + + +G FH D+ TF +DT
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298
Query: 277 RVQKPP 294
Q PP
Sbjct: 299 PKQNPP 304
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 97 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 276
F + +Q ++ + L + ++W V + + +G FH D+ TF +DT
Sbjct: 230 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 288
Query: 277 RVQKPP 294
Q PP
Sbjct: 289 PKQNPP 294
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 97 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 276
F + +Q ++ + L + ++W V + + +G FH D+ TF +DT
Sbjct: 286 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 344
Query: 277 RVQKPP 294
Q PP
Sbjct: 345 PKQNPP 350
>Z92785-2|CAB07200.1| 344|Caenorhabditis elegans Hypothetical
protein F31E9.4 protein.
Length = 344
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 241 HHGNRHMKNRHQTVMHTYS-GTSYLA 167
HHG +H++N + ++T S G+SY+A
Sbjct: 85 HHGLKHLENLFKVSLNTLSFGSSYMA 110
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 268 PPSGRCFHLHHGNRHMKNRHQTVMH 194
PP H HH ++H ++HQ +H
Sbjct: 423 PPHQHPIHHHHQSQHQLHQHQQYLH 447
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 268 PPSGRCFHLHHGNRHMKNRHQTVMH 194
PP H HH ++H ++HQ +H
Sbjct: 390 PPHQHPIHHHHQSQHQLHQHQQYLH 414
>Z81481-6|CAB63435.1| 344|Caenorhabditis elegans Hypothetical
protein C38D9.8 protein.
Length = 344
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 241 HHGNRHMKNRHQTVMHTYS-GTSYLA 167
HHG +H++N + ++T S G+SY+A
Sbjct: 85 HHGLKHLENLFKVSLNTLSFGSSYMA 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,186,241
Number of Sequences: 27780
Number of extensions: 270941
Number of successful extensions: 618
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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