Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L19
(625 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 308 1e-82
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 283 2e-75
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 258 6e-68
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 222 6e-57
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 211 9e-54
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 183 3e-45
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 179 6e-44
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 172 7e-42
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 171 2e-41
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 157 3e-37
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 138 8e-32
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 134 1e-30
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 122 9e-27
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 119 7e-26
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 112 7e-24
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 105 9e-22
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 101 2e-20
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 80 4e-14
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 71 2e-11
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 70 4e-11
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 68 2e-10
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 67 4e-10
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 65 1e-09
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 64 3e-09
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 63 5e-09
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 59 1e-07
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 58 2e-07
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 56 9e-07
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 55 1e-06
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 53 6e-06
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 53 6e-06
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 51 3e-05
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 47 3e-04
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 47 4e-04
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 44 0.002
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 43 0.005
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 41 0.021
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 36 0.79
UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2; Nanoar... 36 1.0
UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides im... 33 4.2
UniRef50_Q81B91 Cluster: Putative uncharacterized protein; n=4; ... 33 5.6
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_P17377 Cluster: Minor core protein lambda-3; n=65; Reov... 33 5.6
UniRef50_A1FFR2 Cluster: General secretion pathway protein GspK ... 32 9.7
UniRef50_Q4D9C8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.7
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 32 9.7
UniRef50_A7ANW6 Cluster: Putative uncharacterized protein; n=1; ... 32 9.7
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 308 bits (755), Expect = 1e-82
Identities = 142/184 (77%), Positives = 165/184 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 423
ERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRV
Sbjct: 81 ERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRV 140
Query: 424 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
FCIGFT KD++SQRKTCYAQH+Q++ IR KM II R++TS++L+ VV KL+PDSIAKDI
Sbjct: 141 FCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDI 200
Query: 604 DKAC 615
+KAC
Sbjct: 201 EKAC 204
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 283 bits (694), Expect = 2e-75
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 423
E +FRKF+LI EDVQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 424 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
FC+GFT K RKT YAQH QVR IRKKM EI+TR+V +++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 604 DKACHGI 624
+KAC I
Sbjct: 198 EKACQSI 204
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 258 bits (633), Expect = 6e-68
Identities = 123/185 (66%), Positives = 148/185 (80%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
++RK RL AEDVQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FC
Sbjct: 475 AYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFC 534
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDK 609
I FT K +KTCYAQ +Q+R IR+KM EI+T TS +L+E+V K IP+SI ++I+K
Sbjct: 535 IAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEK 594
Query: 610 ACHGI 624
A I
Sbjct: 595 ATSSI 599
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 222 bits (542), Expect = 6e-57
Identities = 104/185 (56%), Positives = 138/185 (74%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
DPF RKDWY +KAP+ F R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
+FRK +L ++VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F
Sbjct: 80 AFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFA 139
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDK 609
I T + +KT YA +Q+RAIR+KM EII R+ ++ L+++ NKLIP+ I ++I+K
Sbjct: 140 IAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEK 199
Query: 610 ACHGI 624
A GI
Sbjct: 200 ATQGI 204
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 211 bits (516), Expect = 9e-54
Identities = 106/179 (59%), Positives = 138/179 (77%), Gaps = 4/179 (2%)
Frame = +1
Query: 67 VDPFTRKDWYDVKAPSMFTK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 234
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73
Query: 235 SDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 414
D + FRK +L AE+V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY
Sbjct: 74 DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYF 133
Query: 415 LRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSI 591
LRVF I FT K ++KT YA+ ++V+AIRKKM +I+T V+S++L+ VV+ LI S+
Sbjct: 134 LRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSL 192
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 183 bits (446), Expect = 3e-45
Identities = 89/180 (49%), Positives = 125/180 (69%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL +
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKF 81
Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 423
KF+ EDV G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+
Sbjct: 82 GAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRI 139
Query: 424 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
FCIGFT++ + +KT YA+ Q++ IRK M +IT++ S EL + V+ L + K +
Sbjct: 140 FCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLKKTNFQKKL 199
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 179 bits (435), Expect = 6e-44
Identities = 84/189 (44%), Positives = 125/189 (66%), Gaps = 3/189 (1%)
Frame = +1
Query: 67 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 246
+DP +RK+WYD +AP F+ + G TLV ++ G +IASE +KGRV E +LADL+ D+ +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 247 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 426
+++RK +L+ ++V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 427 CIGFTNKDTL---SQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAK 597
+ FT K + S TCYA+ +QVRAIR+K+ IT + + E LI + K
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTK 201
Query: 598 DIDKACHGI 624
I+K I
Sbjct: 202 KIEKETKNI 210
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 172 bits (418), Expect = 7e-42
Identities = 80/186 (43%), Positives = 123/186 (66%)
Frame = +1
Query: 67 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 246
+DP RK+W+++ AP F G T +N++ GT +A+E +KGRV E SLADLQ SD +
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77
Query: 247 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 426
++RK +LI +DV+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F
Sbjct: 78 MAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIF 137
Query: 427 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDID 606
I FT QRKT YAQ +Q++ IRKK+ EI+ ++V+ + +++ +S+AK+I
Sbjct: 138 VIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIG 197
Query: 607 KACHGI 624
KA I
Sbjct: 198 KATRTI 203
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 171 bits (415), Expect = 2e-41
Identities = 74/185 (40%), Positives = 122/185 (65%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL + E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
++RK R ++VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 83 AYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFV 142
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDK 609
+ FT Q + CYA+ V+ +R ++ ++I R ++ +++E V+ L + ++ + +
Sbjct: 143 VAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVR 202
Query: 610 ACHGI 624
C+ I
Sbjct: 203 RCNPI 207
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 157 bits (380), Expect = 3e-37
Identities = 89/182 (48%), Positives = 118/182 (64%), Gaps = 1/182 (0%)
Frame = +1
Query: 82 RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 261
+KD YDVKA +MF R +G T V R Q TK+ S GL G VFE SLA LQ D RK
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVV---VRK 68
Query: 262 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF- 438
F+LI ED++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+
Sbjct: 69 FKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYT 127
Query: 439 TNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDKACH 618
TN T R+ AQ+ QV I +I+ D ++L+EV+NKL+PD++ KD++KAC
Sbjct: 128 TNVTTRYARQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQ 185
Query: 619 GI 624
I
Sbjct: 186 FI 187
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 138 bits (335), Expect = 8e-32
Identities = 66/116 (56%), Positives = 84/116 (72%)
Frame = +1
Query: 253 FRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 432
FRKF+L EDVQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 433 GFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKD 600
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQD 121
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 134 bits (325), Expect = 1e-30
Identities = 69/114 (60%), Positives = 85/114 (74%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDV AP+MF R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQND--- 74
Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 405
E +FRKF+LI EDVQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 75 EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/41 (68%), Positives = 36/41 (87%)
Frame = +1
Query: 502 IRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDKACHGI 624
IRKKM EI+TR+V +++L+EVVNKLIPDSI KD++KAC I
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSI 151
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 122 bits (293), Expect = 9e-27
Identities = 60/169 (35%), Positives = 96/169 (56%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL ++
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLN 79
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
KF L + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF
Sbjct: 80 GNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFV 139
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKL 576
I FT++ +RK C+ + +R +R + E + ++ + +V KL
Sbjct: 140 IAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKL 188
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 119 bits (286), Expect = 7e-26
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +1
Query: 67 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 246
VD ++KDWYD+KAP+MF R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D E
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQND---E 78
Query: 247 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTD 336
+FRKF+LI EDVQG+ L NF M L+ D
Sbjct: 79 VAFRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 112 bits (269), Expect = 7e-24
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFT-KRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD-SDA 243
D F +K+W V P+ FT KR +G T+ N+ ++ + + RV+E+S AD+ D S A
Sbjct: 18 DSFIKKEWRHVLVPAYFTGKRDIGVTVSNKCARGRVPMDYVNNRVWELSHADMVNDLSHA 77
Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 423
R F +R IA G V F GM LT DKL +++K++T+I+A++D KT DG++LR+
Sbjct: 78 YRLF-SWRSIAA---GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRL 133
Query: 424 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
F IGFT K S + YA + R +R M + +T ++ + ++ + + I +I
Sbjct: 134 FTIGFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKIENEI 193
Query: 604 DKACHGI 624
+ C I
Sbjct: 194 VEKCKQI 200
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 105 bits (252), Expect = 9e-22
Identities = 51/139 (36%), Positives = 86/139 (61%)
Frame = +1
Query: 193 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 372
GR ++V+ ADL ++D RKF D++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 373 IEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSE 552
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 553 LREVVNKLIPDSIAKDIDK 609
+++++ KL +++ K I++
Sbjct: 133 VQKIMKKLANETVGKRIEE 151
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 101 bits (241), Expect = 2e-20
Identities = 53/185 (28%), Positives = 99/185 (53%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
D +R++ V AP +F + +G TL+ + + + ++++VSLAD+ E
Sbjct: 19 DVNSRQELIKVYAPDIFDSKLIGKTLIKKRNPAD-ENSSVDNKIYQVSLADILGKE--EF 75
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
S F + + FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F
Sbjct: 76 SSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFL 135
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDK 609
I + K + KT Y +Q RA+R+++ +II ++ + ++++ ++++ I + I+
Sbjct: 136 IAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEI 195
Query: 610 ACHGI 624
C I
Sbjct: 196 NCSKI 200
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 80.2 bits (189), Expect = 4e-14
Identities = 56/181 (30%), Positives = 92/181 (50%)
Frame = +1
Query: 67 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 246
VD F K+WY V AP+ F + +G TL + G I GRV E +L D+ D +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWTKQ 61
Query: 247 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 426
FR+ E++ G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV
Sbjct: 62 NIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVK 119
Query: 427 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDID 606
I T K A+ +Q+ +IR+ M ++ + E +N+++ +A +I
Sbjct: 120 PIVLTVK---------RARTSQIESIRQIMINVVNKRGAELGFTEFINEVVTGKVASEIY 170
Query: 607 K 609
K
Sbjct: 171 K 171
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 70.9 bits (166), Expect = 2e-11
Identities = 50/171 (29%), Positives = 90/171 (52%)
Frame = +1
Query: 67 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 246
+D + K+WY+++AP+ + VGTT+ L GR E ++ +L +D
Sbjct: 10 LDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSL-------LVGRNVETTVGELT--NDMT 60
Query: 247 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 426
++ K L +V G + G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV
Sbjct: 61 KNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVK 120
Query: 427 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLI 579
FT K A+ +Q++AIR+ M +I+ + + ++ + + I
Sbjct: 121 PTCFTIK---------RARSSQMQAIREMMVDIVKKRASETDFETFMQEAI 162
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 70.1 bits (164), Expect = 4e-11
Identities = 55/178 (30%), Positives = 83/178 (46%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
D + K WY + AP MF +VG T + E + GRV E +L D+ D
Sbjct: 4 DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
FR+ DV+G F G L D +R +V++ + I+ IDV T DGY +RV
Sbjct: 57 IKVFFRIY--DVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAG 114
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
+ FT T A+ +Q RAIRK+M ++I + + E + + + S + I
Sbjct: 115 LAFT---------TRRAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESI 163
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 68.1 bits (159), Expect = 2e-10
Identities = 51/180 (28%), Positives = 85/180 (47%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
D + K WY + P F+ +++G T + K+ GRV E +L DL +
Sbjct: 15 DKWRSKVWYTIITPETFSSKEIGMTPADDPD--KVI-----GRVAESTLYDLSGNFKKMH 67
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
F++ VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV
Sbjct: 68 VKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKV 125
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDK 609
+ ++ S KT IRKK+ E +T + E V +I D +++ K
Sbjct: 126 LTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSK 176
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 66.9 bits (156), Expect = 4e-10
Identities = 50/178 (28%), Positives = 83/178 (46%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
DP+ K W+ V APS + N Q L R EVSL D+ D
Sbjct: 20 DPWALKKWFSVYAPSYLGGVFLAEVPANEAQK-------LLMRTLEVSLYDITKDISHLP 72
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
KF++ V+G L F G++LT D +R +V+K + + A +VKT DG V+R+
Sbjct: 73 IKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAV 130
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
+G T + +K+ A+RKKM E + + + + + +++ ++A D+
Sbjct: 131 LGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDSGQFLKEILEGTLAADL 179
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 64.9 bits (151), Expect = 1e-09
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+ D +T K W+ + AP F ++G T + +K+ GR E +LA+L D
Sbjct: 10 VKDKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVV-----GRTVETTLAELTNDYSN 62
Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 423
+ +++K V G N F +LT + L + ++ + IE +DV T DGY LRV
Sbjct: 63 QNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRV 122
Query: 424 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSE----LREVVNKLIPDSI 591
+ F T+ + KT +Q RAIR M +I+ +S L+E V +P I
Sbjct: 123 KSVVF----TVRRCKT-----SQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEI 173
Query: 592 AKDIDK 609
K+ K
Sbjct: 174 YKNAKK 179
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 64.1 bits (149), Expect = 3e-09
Identities = 47/174 (27%), Positives = 79/174 (45%)
Frame = +1
Query: 82 RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 261
+K WY V AP F ++++G TL + + GR +L +L DS A +
Sbjct: 12 QKRWYSVLAPEQFDRQELGETLAEEP-------DQVVGRTITTTLGELTGDSGANNTKLT 64
Query: 262 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 441
F++ DV F +LT D LR +V++ + +EA+I V TTD Y +RV + T
Sbjct: 65 FKIT--DVGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT 122
Query: 442 NKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
K A +Q +AIR+ M + + V+ ++ +++ I
Sbjct: 123 TKK---------ADRSQEKAIRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAI 167
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 63.3 bits (147), Expect = 5e-09
Identities = 50/172 (29%), Positives = 81/172 (47%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
I D + K W+ V AP +F + +GTT + + L GRV E +L D+ D
Sbjct: 6 IRDTWRLKKWFKVVAPPLFGETVLGTTPADDP-------DKLIGRVMETTLFDITGDYSY 58
Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 423
F+++ V+G F G +L D +R + ++ + + +V T DGY LRV
Sbjct: 59 VHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRV 116
Query: 424 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLI 579
+ FT R+ C + +Q AIRK M EI+ + S L E++ ++
Sbjct: 117 TAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARESTLDELIQLMV 159
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 58.8 bits (136), Expect = 1e-07
Identities = 48/182 (26%), Positives = 77/182 (42%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
D + K WYD+ P F +G T N L GR+ E+SL DL +
Sbjct: 17 DTWKSKVWYDIYTPQSFGGDVIGQTPANDPAN-------LIGRISEISLRDLTNEHSKHM 69
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
+ F++ + V G N F G D T + L+ V++ ++ I A ++V+T DG+ +RV
Sbjct: 70 TRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKA 127
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDK 609
+ T KT IR +M +II + E V+ ++ + I
Sbjct: 128 LVLTAVRARDHHKT---------EIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYG 178
Query: 610 AC 615
C
Sbjct: 179 DC 180
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 57.6 bits (133), Expect = 2e-07
Identities = 41/174 (23%), Positives = 79/174 (45%)
Frame = +1
Query: 82 RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 261
+K WY V+AP F + +G T + + GR E +L +L D+ +
Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64
Query: 262 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 441
F++ +V + F +LT D LR +V++ + +EA I V TTD Y +++ + T
Sbjct: 65 FKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT 122
Query: 442 NKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
K A +Q +AIR+ M +++ ++++ ++ ++ I
Sbjct: 123 TKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAI 167
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 55.6 bits (128), Expect = 9e-07
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
D + K W+ + +P +F + +G+T T GR E +L DL D
Sbjct: 16 DKWKMKKWFSIYSPKVFGEVSLGSTPAFDVSQTM-------GRKVETTLYDLTGDFSTVY 68
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
F+++ + G + F G +L+ D +R +V++ + I +D+ T DG+ LRV
Sbjct: 69 VHLYFKVVRNE--GERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRV-- 124
Query: 430 IGFTNKDTLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
TL+ T Y H Q IRK M +++ + E V ++I ++A +I
Sbjct: 125 ------KTLA--LTAYRVHREQATTIRKIMEDVVKKTAEGKTFDEFVQEMIFGNLANNI 175
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 55.2 bits (127), Expect = 1e-06
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Frame = +1
Query: 67 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 246
V+ + K+WY V AP K+ +G + + E + GRV VSL +L D +
Sbjct: 12 VEGWKAKNWYKVHAPEFLGKQFIGEIISSNP-------ENVPGRVLTVSLGELIQDYSKQ 64
Query: 247 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDG-YVLRV 423
F+++ +V G F+G ++T + +R MVKK + +++ I V L+V
Sbjct: 65 NVRASFKIM--NVAGDAAYTQFNGHEMTKEFVRAMVKKRASRVDSTITVTPLGSTRELQV 122
Query: 424 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
FT +A+ +QV+ +R KM +++ ++ V+ ++ ++K +
Sbjct: 123 TITAFTIN---------HARLSQVQELRAKMVKVVEDSAKEADFESFVSAMLKGELSKKM 173
Query: 604 DKACHGI 624
C I
Sbjct: 174 FAECKPI 180
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 52.8 bits (121), Expect = 6e-06
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = -2
Query: 291 SLDILSDKSELAERPFRITISLEISKGDLKNTPL*TLRCNFCSLGAIDKGGAHLSLGEHG 112
SL +L +S+L I I L IS+G+LK++ L R + S + +KG A++S E
Sbjct: 61 SLHVLGSQSDLPVG--MILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDR 118
Query: 111 RRFNIVPVFTGERINNLLLNTLLASFRKAFIFTDPSC 1
RR N++PV +R+ LLL++L +F D C
Sbjct: 119 RRLNVIPVLLSKRVGCLLLSSLF-PLGNPLVFPDDHC 154
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 52.8 bits (121), Expect = 6e-06
Identities = 40/178 (22%), Positives = 80/178 (44%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
D + K WY +K P F +++G T + L GR EV++ +L D +
Sbjct: 12 DTWKEKSWYTIKTPVNFEDKEIGETPARDP-------DYLIGRGVEVTMRELSGDFS--K 62
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
+ K R ++V G F G TTD +R M+++ + I+A+ VKT D +++
Sbjct: 63 QYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHV 122
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
+ T T A+ +Q + +R+ + +++ E++ ++ +A ++
Sbjct: 123 LAVT---------TRRAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVNGKLASEV 171
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 50.8 bits (116), Expect = 3e-05
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSM-FTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 246
D + K WY ++AP + + +G T+ + E + GR++E++ + D
Sbjct: 21 DKWKTKRWYTIRAPRHPWNYQNIGETIGE-------SDEHIIGRIYEMTQQEFNGDFTKM 73
Query: 247 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 426
+FR ++E V G++ L F G T+ +R +++++ I+ IDV T DGY++R+
Sbjct: 74 HVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIK 131
Query: 427 CIGFTNK 447
+ T K
Sbjct: 132 PLIITQK 138
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 47.2 bits (107), Expect = 3e-04
Identities = 38/175 (21%), Positives = 76/175 (43%)
Frame = +1
Query: 85 KDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKF 264
K+W V AP +F + +G + N+ + + R EVSL++L +D ++
Sbjct: 25 KEWKIVIAPKIFEYKIIGYIINNKYTNNSGRLKEISKRNLEVSLSELI--NDYSSYYKII 82
Query: 265 RLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTN 444
+L + + F+G L+ D + MV K L+E +I + T V+ +F + +T
Sbjct: 83 KLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YTI 141
Query: 445 KDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDK 609
L Y + +++R I ++ I + + + + + D I I +
Sbjct: 142 TKNLHSNSITYGKRSRIRKINRESILCIKKMLENKPIDFIYKICCSDVIGNSIKR 196
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 46.8 bits (106), Expect = 4e-04
Identities = 34/135 (25%), Positives = 62/135 (45%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+ D + K W + AP F V V T + KGRV EV+L D+
Sbjct: 8 VKDKWRDKRWITIHAPDSFNS--VPAARVPITD-----DKHAKGRVIEVTLFDILKGDPQ 60
Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 423
+ +++ + I + V + F + + + LR +V++ + + +DVKT+DGYV R+
Sbjct: 61 QNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRL 119
Query: 424 FCIGFTNKDTLSQRK 468
+ T + + +K
Sbjct: 120 KVLALTYRHLNTSKK 134
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 44.4 bits (100), Expect = 0.002
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 1/179 (0%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLK-GRVFEVSLADLQADSDAE 246
D + K WY + APS +R++ + A L GR EV ++D +
Sbjct: 11 DKWKEKTWYTIVAPSFLGEREIAL--------SPAADPSLMIGRKVEVPVSDFTGNFRKS 62
Query: 247 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 426
+ FR+ ++ G+ F G ++ D +R MV++ + I+ + KT DGY L V
Sbjct: 63 STMVIFRV--KECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRL-VI 119
Query: 427 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
I + L+ K +R K+ I S L E+ +I D++ DI
Sbjct: 120 KIVLVSDSKLTANKR--------GEVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDI 170
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 43.2 bits (97), Expect = 0.005
Identities = 45/185 (24%), Positives = 75/185 (40%)
Frame = +1
Query: 70 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 249
+ + K WY V+AP ++V L S + RV EV +++L +
Sbjct: 12 EKWKEKVWYTVEAPPYLGSKEVSVALGED-------SNSMVNRVVEVPISELTGNFKKSN 64
Query: 250 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 429
FR+ + +G F G + D +R +V++ + I+ DVKT+D ++ V
Sbjct: 65 EKALFRIT--NCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKI 122
Query: 430 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDK 609
+ T+ + +K IRK + + I S E V LI D I D+
Sbjct: 123 VVVTDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMIS 173
Query: 610 ACHGI 624
A I
Sbjct: 174 ATKDI 178
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.1 bits (92), Expect = 0.021
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTT 144
++D F++KDWYDVKA +MF R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 35.9 bits (79), Expect = 0.79
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1
Query: 568 NKLIPDSIAKDIDKACHGI 624
NKLIPDSI KDI+KAC I
Sbjct: 1 NKLIPDSIGKDIEKACQSI 19
>UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3Ae -
Nanoarchaeum equitans
Length = 198
Score = 35.5 bits (78), Expect = 1.0
Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Frame = +1
Query: 82 RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 261
RK W+ +KAP++F + ++G T + E + GR E+++A L ++ ++++
Sbjct: 12 RKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMA-LVTNNYQLQNYKG 63
Query: 262 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 441
I + V+G G+ + ++ V+ + I + +K D ++RV + T
Sbjct: 64 IFKITK-VEGTTAKTELEGIKMYESIIQKWVEPGRDKITDSFVIKDKDNRLVRVKPVLIT 122
Query: 442 NKDTLSQRKTCYAQHTQVRAI-RKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDK 609
N R+ Q T +R I R E+ + + +++NK IP+ + I K
Sbjct: 123 N------RRLHRKQGTAIRNIWRNYFVELGKKLSFEDMVMKILNKEIPEQLKIQIKK 173
>UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 628
Score = 33.5 bits (73), Expect = 4.2
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 428 QKTRRTYPSVVL--TSMLASISVCHFFTIHLSLSVVRSMPWKLQRTLRP 288
QK RRTYP + T + +IS H + + R +PW+L TLRP
Sbjct: 505 QKERRTYPVQISLDTRQIPNISTRHIVSFVHWDAENRRVPWRLAETLRP 553
>UniRef50_Q81B91 Cluster: Putative uncharacterized protein; n=4;
Bacillus cereus group|Rep: Putative uncharacterized
protein - Bacillus cereus (strain ATCC 14579 / DSM 31)
Length = 151
Score = 33.1 bits (72), Expect = 5.6
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +1
Query: 232 DSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTD-KLRWMVKKWQ-------TLIEANI 387
D ER F+ ++I+ED++ +LC + D+ T+ KL + K + LI N
Sbjct: 71 DVSPERMFQVLQIISEDIERIEMLCKEYEKDMPTEMKLIYDTKSGKFKAEYEYDLIHTND 130
Query: 388 DVKTTDGY 411
D+KT D +
Sbjct: 131 DIKTADDF 138
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.1 bits (72), Expect = 5.6
Identities = 27/106 (25%), Positives = 51/106 (48%)
Frame = +1
Query: 286 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQR 465
Q ++ CN G+D+ D+++ V + +ID D VF G D L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 466 KTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 603
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_P17377 Cluster: Minor core protein lambda-3; n=65;
Reoviridae|Rep: Minor core protein lambda-3 - Reovirus
type 2 (strain D5/Jones) (T2J) (Mammalian orthoreovirus
2)
Length = 1267
Score = 33.1 bits (72), Expect = 5.6
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 379 ANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELR 558
+ +DV D +LR+ +G K +Q Q ++ A+ K I+ +DV + +L
Sbjct: 1117 SGLDVNAIDSALLRLRTLGADKKALTAQLLMVGLQESEADALAGK---IMLQDVNTVQLA 1173
Query: 559 EVVNKLIPDS-IAKDID 606
VVN +PD+ ++ D D
Sbjct: 1174 RVVNLAVPDTWMSLDFD 1190
>UniRef50_A1FFR2 Cluster: General secretion pathway protein GspK
precursor; n=1; Pseudomonas putida W619|Rep: General
secretion pathway protein GspK precursor - Pseudomonas
putida W619
Length = 237
Score = 32.3 bits (70), Expect = 9.7
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -2
Query: 492 LGMLSVACLALAERILVGETDAENT*DISVSGLNVNVGFNQCLPFLYHPSE---FISGEV 322
+G+LSV LA + + + A + + +GL GFN + +L + G+V
Sbjct: 16 VGLLSVLLGGLAVSVQLQQRQARWQGNQTQAGLAAQAGFNLAVAYLLRDGQARWLADGQV 75
Query: 321 HAVEIAENITSLDILSDKSEL 259
H + A + + ++S++ +L
Sbjct: 76 HVADFAGSTLHISVVSERGKL 96
>UniRef50_Q4D9C8 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 344
Score = 32.3 bits (70), Expect = 9.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 592 RWSQESACSRLHEALNWSHR 533
RW S+ SR+H AL+WSHR
Sbjct: 67 RWQGRSSESRVHRALSWSHR 86
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 32.3 bits (70), Expect = 9.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 463 RKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIDK 609
R CY + Q++ + + D T+SE+ +VNKL +SI K DK
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
>UniRef50_A7ANW6 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 1902
Score = 32.3 bits (70), Expect = 9.7
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = -2
Query: 303 ENITSLDILSDKSELAERPFRITISLEISKGDLKNTPL*TLRCNFCSLGAIDKGGAHLSL 124
E++ S +I+ D + + RIT+ ++I + T L TLR N ++ ++ +H L
Sbjct: 100 ESLYSPEIVDDLNHIVTSQNRITLLIKIRAINTLTTVLQTLRQNVPTVWEVNSLESHQYL 159
Query: 123 GEHGRRFNIVPVFTGERINNLLLNTLLASF--RKAFI 19
E RF + V NNL +++ S+ RKAFI
Sbjct: 160 CER-FRFISIDVLLQVFNNNLEAPSVVTSYQRRKAFI 195
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,826,051
Number of Sequences: 1657284
Number of extensions: 12796977
Number of successful extensions: 34917
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 33774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34877
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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