Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_L18
         (381 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   2.8  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   3.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   6.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   8.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   8.5  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    20   8.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   8.5  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 138 GSFNNIPDHKLFDGF 94
           G  + I  HK FDGF
Sbjct: 615 GGISEIQKHKWFDGF 629


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 363 SYYLINSLLPLYILWTRHIPWEVALGWCTDPPVL 262
           +YYL +  +   IL    +P E++L W   P VL
Sbjct: 76  NYYLFSLAISDLILLVLGLPNELSLFWQQYPWVL 109


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 273 DPYTTQEQLPKGYGASTECTEEVG 344
           +P+T QE L +G    T C    G
Sbjct: 614 EPFTFQEGLSEGMRTRTVCGVAAG 637


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 342 LLPLYILWTRHIPW 301
           +L + ++WT  IPW
Sbjct: 163 ILFIVLIWTYTIPW 176


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 324 LWTRHIPWEVALGWCTDPPV 265
           +W RHI    A+G+  D PV
Sbjct: 635 VWGRHIYDGRAMGFPLDKPV 654


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 324 LWTRHIPWEVALGWCTDPPV 265
           +W RHI    A+G+  D PV
Sbjct: 635 VWGRHIYDGRAMGFPLDKPV 654


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 174 SIY*GFVYVPHSGSFNNIPDHKLFDGFVFGHAASAVG 64
           +IY   V V  +G       + LF GFV   A  AVG
Sbjct: 65  AIYGLVVAVLIAGGLEEPKGYTLFKGFVHLGAGLAVG 101


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 211 YCVSCAIH 234
           YCV+C +H
Sbjct: 542 YCVACGLH 549


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,965
Number of Sequences: 438
Number of extensions: 1955
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)