Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L15
(541 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 130 9e-31
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 130 9e-31
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 130 9e-31
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 124 8e-29
AY598469-1|AAT12000.1| 1188|Drosophila melanogaster armitage pro... 31 0.76
AE014296-663|AAX52729.1| 1188|Drosophila melanogaster CG11513-PB... 31 0.76
AE014296-662|AAF47775.1| 1274|Drosophila melanogaster CG11513-PA... 31 0.76
EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro... 29 4.1
BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro... 29 4.1
AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p pro... 29 4.1
AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA... 29 4.1
AY061562-1|AAL29110.1| 249|Drosophila melanogaster LP11415p pro... 29 5.4
AE014298-1718|AAF48118.1| 249|Drosophila melanogaster CG2471-PA... 29 5.4
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 28 9.4
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 130 bits (315), Expect = 9e-31
Identities = 69/112 (61%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Frame = +3
Query: 99 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 278
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 279 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 431
TNIGSGV DDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 130 bits (315), Expect = 9e-31
Identities = 69/112 (61%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Frame = +3
Query: 99 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 278
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 279 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 431
TNIGSGV DDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 130 bits (315), Expect = 9e-31
Identities = 69/112 (61%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Frame = +3
Query: 99 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 278
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 279 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 431
TNIGSGV DDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 124 bits (299), Expect = 8e-29
Identities = 67/112 (59%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Frame = +3
Query: 99 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 278
M++KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+DLI
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 279 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 431
TNIGSGV DDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY598469-1|AAT12000.1| 1188|Drosophila melanogaster armitage
protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -1
Query: 223 YGSTSTAAAFSMVEIFSPVTATSSSTRIRAE*TQANSAFDAILNVIRASRQKALAQGEQA 44
+G + +++E + RI T +NS+ D + R KAL QG+
Sbjct: 722 FGPPGSGKTMTLIETLLQLVRNLPGARILVG-TPSNSSADLVTK--RLIDSKALLQGDFI 778
Query: 43 RLTSQNEEKRGLVP 2
RL S N+ ++ L+P
Sbjct: 779 RLVSYNQVEKDLIP 792
>AE014296-663|AAX52729.1| 1188|Drosophila melanogaster CG11513-PB,
isoform B protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -1
Query: 223 YGSTSTAAAFSMVEIFSPVTATSSSTRIRAE*TQANSAFDAILNVIRASRQKALAQGEQA 44
+G + +++E + RI T +NS+ D + R KAL QG+
Sbjct: 722 FGPPGSGKTMTLIETLLQLVRNLPGARILVG-TPSNSSADLVTK--RLIDSKALLQGDFI 778
Query: 43 RLTSQNEEKRGLVP 2
RL S N+ ++ L+P
Sbjct: 779 RLVSYNQVEKDLIP 792
>AE014296-662|AAF47775.1| 1274|Drosophila melanogaster CG11513-PA,
isoform A protein.
Length = 1274
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -1
Query: 223 YGSTSTAAAFSMVEIFSPVTATSSSTRIRAE*TQANSAFDAILNVIRASRQKALAQGEQA 44
+G + +++E + RI T +NS+ D + R KAL QG+
Sbjct: 808 FGPPGSGKTMTLIETLLQLVRNLPGARILVG-TPSNSSADLVTK--RLIDSKALLQGDFI 864
Query: 43 RLTSQNEEKRGLVP 2
RL S N+ ++ L+P
Sbjct: 865 RLVSYNQVEKDLIP 878
>EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin protein.
Length = 1840
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 298 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 146
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588
>BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p protein.
Length = 1840
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 298 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 146
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588
>AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p
protein.
Length = 934
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 298 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 146
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 632 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 682
>AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA
protein.
Length = 1837
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 298 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 146
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1535 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1585
>AY061562-1|AAL29110.1| 249|Drosophila melanogaster LP11415p
protein.
Length = 249
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 66 AFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTI 191
+F L ++ FK+ S A L +A++ +D D A+T + ++ +
Sbjct: 174 SFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215
>AE014298-1718|AAF48118.1| 249|Drosophila melanogaster CG2471-PA
protein.
Length = 249
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 66 AFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTI 191
+F L ++ FK+ S A L +A++ +D D A+T + ++ +
Sbjct: 174 SFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 280 VIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEI 179
+I S+ L+P+K N P QY T+ A +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,451,393
Number of Sequences: 53049
Number of extensions: 286472
Number of successful extensions: 783
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -