Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_L14
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.58 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.4  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 11  KSLYRKSRKITKIILVRILYSTLKV*CENFHIFKSVLWEID 133
           KS+Y       KI L  I Y+ L +      IFKS  W++D
Sbjct: 69  KSVYASLLCTEKIFLFAI-YTNLSI-LTTVTIFKSAFWDVD 107


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 317 FLFICSLSTVSSVQTTFFLCCVRVGF 240
           +L  CS + V +  TTF L     GF
Sbjct: 125 YLVYCSSALVLAAMTTFHLIYEAHGF 150


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 317 FLFICSLSTVSSVQTTFFLCCVRVGF 240
           +L  CS + V +  TTF L     GF
Sbjct: 121 YLVYCSSALVLAAMTTFHLIYEAHGF 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,253
Number of Sequences: 336
Number of extensions: 1717
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)