Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L13
(464 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85; ... 95 5e-19
UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16; ... 95 5e-19
UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13; ... 83 4e-15
UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3; E... 79 6e-14
UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1; ... 77 2e-13
UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10; ... 77 3e-13
UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1; ... 71 9e-12
UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora in... 71 2e-11
UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3; C... 70 2e-11
UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3; E... 70 3e-11
UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33... 68 9e-11
UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89 prot... 66 4e-10
UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;... 65 8e-10
UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, wh... 64 1e-09
UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;... 63 3e-09
UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lambl... 62 4e-09
UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059; ... 62 8e-09
UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein; ... 61 1e-08
UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4; Tric... 61 1e-08
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 61 1e-08
UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putati... 60 2e-08
UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1; ... 59 4e-08
UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7; E... 59 5e-08
UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=... 58 1e-07
UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic... 57 2e-07
UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;... 56 3e-07
UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15... 55 7e-07
UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;... 53 3e-06
UniRef50_UPI0000F2D36E Cluster: PREDICTED: hypothetical protein;... 46 4e-04
UniRef50_A0EGR2 Cluster: Chromosome undetermined scaffold_96, wh... 45 0.001
UniRef50_Q8CHJ1-2 Cluster: Isoform 2 of Q8CHJ1 ; n=1; Rattus nor... 37 0.19
UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, wh... 36 0.57
UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF5... 35 0.76
UniRef50_A5FKG8 Cluster: Peptidase S41; n=1; Flavobacterium john... 35 1.0
UniRef50_Q7QU71 Cluster: GLP_226_29764_29144; n=1; Giardia lambl... 32 5.4
UniRef50_A2DUR6 Cluster: Putative uncharacterized protein; n=1; ... 32 5.4
UniRef50_UPI0000F2C139 Cluster: PREDICTED: hypothetical protein;... 32 7.1
UniRef50_A5ZS39 Cluster: Putative uncharacterized protein; n=1; ... 32 7.1
UniRef50_A5AI63 Cluster: Putative uncharacterized protein; n=1; ... 32 7.1
UniRef50_A2WTB1 Cluster: Putative uncharacterized protein; n=2; ... 31 9.4
>UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85;
Eukaryota|Rep: 60S acidic ribosomal protein P2 - Mus
musculus (Mouse)
Length = 115
Score = 95.5 bits (227), Expect = 5e-19
Identities = 44/65 (67%), Positives = 56/65 (86%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVG 60
Query: 252 KLSSM 266
KL+S+
Sbjct: 61 KLASV 65
>UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16;
Bilateria|Rep: 60S acidic ribosomal protein P2 - Homo
sapiens (Human)
Length = 115
Score = 95.5 bits (227), Expect = 5e-19
Identities = 44/65 (67%), Positives = 56/65 (86%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 252 KLSSM 266
KL+S+
Sbjct: 61 KLASV 65
>UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Alternaria alternata (Alternaria rot fungus)
Length = 113
Score = 82.6 bits (195), Expect = 4e-15
Identities = 39/65 (60%), Positives = 53/65 (81%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+++AAYLL LGG SP+AADV+ +L SVGIEADS++L K+ISEL GK++ ELI +G
Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSE 60
Query: 252 KLSSM 266
KL+S+
Sbjct: 61 KLASV 65
>UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3;
Euplotes|Rep: 60S acidic ribosomal protein P2 - Euplotes
raikovi
Length = 113
Score = 78.6 bits (185), Expect = 6e-14
Identities = 34/65 (52%), Positives = 50/65 (76%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+Y+AAY L VLGG +SP+A DV+K+L SVG++++ +KL ++ L GK + ELIEAG
Sbjct: 1 MKYIAAYALLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSS 60
Query: 252 KLSSM 266
K+SS+
Sbjct: 61 KVSSL 65
>UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1;
Solanum tuberosum|Rep: Putative uncharacterized protein
- Solanum tuberosum (Potato)
Length = 162
Score = 77.0 bits (181), Expect = 2e-13
Identities = 34/65 (52%), Positives = 53/65 (81%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+ +AAYLLAVLGG P+ D++KIL+SVG EAD ++++ ++S+++GK++ ELI AGR
Sbjct: 1 MKVIAAYLLAVLGGNTCPSEKDLKKILASVGAEADDDRIQLLLSQVDGKDITELIAAGRE 60
Query: 252 KLSSM 266
KL+S+
Sbjct: 61 KLASV 65
>UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Cladosporium herbarum (Davidiella tassiana)
Length = 111
Score = 76.6 bits (180), Expect = 3e-13
Identities = 34/65 (52%), Positives = 50/65 (76%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+Y+AAYLL L G +SP+A D++ +LSSVGI+AD E+L ++ EL GK++ ELI +G
Sbjct: 1 MKYMAAYLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQ 60
Query: 252 KLSSM 266
KL+S+
Sbjct: 61 KLASV 65
>UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1;
Pectinaria gouldii|Rep: Putative uncharacterized protein
- Pectinaria gouldii (Trumpet worm) (Ice-cream cone
worm)
Length = 118
Score = 71.3 bits (167), Expect = 9e-12
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
MRYVAAYLLA LGG + A ++ IL SVGI+AD EKL KVI+EL GK++ E+I A
Sbjct: 1 MRYVAAYLLAALGGNNNVDAKAIKGILGSVGIDADDEKLNKVIAELKGKDIAEVI-AADA 59
Query: 252 KLSSM 266
KL+S+
Sbjct: 60 KLASV 64
>UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora
infestans|Rep: Ribosomal protein - Phytophthora
infestans (Potato late blight fungus)
Length = 135
Score = 70.5 bits (165), Expect = 2e-11
Identities = 34/63 (53%), Positives = 42/63 (66%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
MRY+AAYLLAVLGG +P DVEKIL S +E D ++ VI + GK EE+I AG
Sbjct: 1 MRYIAAYLLAVLGGHTTPTENDVEKILKSSDVEVDKARVAAVIKAMEGKTAEEVIAAGSE 60
Query: 252 KLS 260
KL+
Sbjct: 61 KLA 63
>UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3;
Chromadorea|Rep: 60S acidic ribosomal protein P2 -
Caenorhabditis elegans
Length = 107
Score = 70.1 bits (164), Expect = 2e-11
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+Y+ AYLLA LGG ASP+A DV K+L + G++ D E V+ L GK + E+I G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 252 KLSSM 266
KLSS+
Sbjct: 61 KLSSV 65
>UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Rhodotorula glutinis (Yeast)
Length = 110
Score = 69.7 bits (163), Expect = 3e-11
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M++VAAYLL V G SP+A DV+K+L++ I+AD E+L +I EL GK+V E+I G
Sbjct: 1 MKHVAAYLLLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSK 60
Query: 252 KLSSM 266
KL+S+
Sbjct: 61 KLASV 65
>UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33;
Eukaryota|Rep: 60S acidic ribosomal protein P2-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 68.1 bits (159), Expect = 9e-11
Identities = 29/65 (44%), Positives = 50/65 (76%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+ AA+LLAVLGG A+P+A +++ I+ +VG + D E ++ ++ E++GK++ ELI +GR
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60
Query: 252 KLSSM 266
KL+S+
Sbjct: 61 KLASV 65
>UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89
protein; n=4; Monodelphis domestica|Rep: PREDICTED:
similar to Wdr89 protein - Monodelphis domestica
Length = 72
Score = 66.1 bits (154), Expect = 4e-10
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +3
Query: 81 VAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLS 260
+A Y LAVLG SP + DV+KIL ++ I+AD E+L KVI N KN+E+LI G KL
Sbjct: 1 MATYFLAVLGSNDSPNSKDVKKILGNINIKADEERL-KVIGNFNSKNIEDLISQGSNKLD 59
Query: 261 SM 266
SM
Sbjct: 60 SM 61
>UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 138
Score = 64.9 bits (151), Expect = 8e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVI 200
MRYVAAYLLAVLGG SP + D++KIL SVGIE D E+L KV+
Sbjct: 1 MRYVAAYLLAVLGGNESPTSKDLKKILDSVGIETDDERLNKVV 43
>UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 113
Score = 64.1 bits (149), Expect = 1e-09
Identities = 27/65 (41%), Positives = 45/65 (69%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+Y+AAY L VLGG +P D+ K+L G+E+ + +K V+S L GKN+ ++I+ G+
Sbjct: 1 MKYIAAYALLVLGGNNAPTEDDITKLLKEAGVESVAADVKNVVSTLKGKNLNDVIKEGQK 60
Query: 252 KLSSM 266
+L+S+
Sbjct: 61 QLTSL 65
>UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 74
Score = 62.9 bits (146), Expect = 3e-09
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M Y+AAYLLAVL SP ++KILSS+G EA++E L KVI + N KN EE+I
Sbjct: 1 MHYMAAYLLAVLSSNKSPNCRHLKKILSSIGTEAEAEWL-KVIGKFNIKNTEEVILQESS 59
Query: 252 KLSSM 266
KL+SM
Sbjct: 60 KLASM 64
>UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29574_29942 - Giardia lamblia
ATCC 50803
Length = 122
Score = 62.5 bits (145), Expect = 4e-09
Identities = 29/67 (43%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISEL--NGKNVEELIEAG 245
M+++AAYLLA +GGK PA AD+EKI+++VG D++ K V+ ++ G +VE+L+ G
Sbjct: 1 MKHLAAYLLAKMGGKNEPAVADIEKIIAAVGGTTDADLAKTVVEKVGAGGLSVEDLMSLG 60
Query: 246 RGKLSSM 266
+ +++SM
Sbjct: 61 KKRMASM 67
>UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 12.t00059 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 61.7 bits (143), Expect = 8e-09
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+Y+AAY+L +G + + A V++IL++ G E D K+K+V +NGKNV E+IEAG+
Sbjct: 1 MQYIAAYILCTIGHE-NAEEAKVKEILTAAGAEIDEAKIKQVFDAMNGKNVWEVIEAGKK 59
Query: 252 KLSSM 266
++ SM
Sbjct: 60 QMGSM 64
>UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein;
n=4; Oryza sativa|Rep: Putative 60S acidic ribosomal
protein - Oryza sativa subsp. japonica (Rice)
Length = 167
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
MR+VAAYL+A +GG ASP DV IL +VG + D +KL + ++ GK++ E++ AG
Sbjct: 59 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 118
Query: 252 KLS 260
L+
Sbjct: 119 MLA 121
>UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 106
Score = 61.3 bits (142), Expect = 1e-08
Identities = 24/65 (36%), Positives = 46/65 (70%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+Y+AAYLL+ G P V+KIL + G+E D+ +L+ V+++++ K+V+EL+E G+
Sbjct: 1 MKYIAAYLLSKAAGNEKPTQEQVKKILEAAGVEVDAAQLEAVVTKMSEKSVDELVETGKT 60
Query: 252 KLSSM 266
+++ +
Sbjct: 61 EMNKV 65
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 60.9 bits (141), Expect = 1e-08
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+Y+AAYLL G +P A ++ IL SVGIE + EK+ V+S L GK+V+ELI G
Sbjct: 1 MKYLAAYLLLNAAGN-TPDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNE 59
Query: 252 KLSSM 266
KL+++
Sbjct: 60 KLAAV 64
>UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein p2,
putative - Theileria annulata
Length = 110
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
++YVA+YLLAV G SP+ DV +L+SVG E D + L S ++GK V E I AG
Sbjct: 3 LKYVASYLLAVTCGNESPSKDDVRDVLNSVGSEVDEDALSAFFSAVSGKVVHETISAGLD 62
Query: 252 KLSSM 266
KL ++
Sbjct: 63 KLQTL 67
>UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 102
Score = 59.3 bits (137), Expect = 4e-08
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEA 242
MR+VAAYL+A +GG ASP DV IL +VG + D +KL + ++ GK++ E++ A
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAA 57
>UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Plasmodium falciparum
Length = 112
Score = 58.8 bits (136), Expect = 5e-08
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+YVAAYL+ VLGG +P+ +V+ +L +V + + E L I L GK+ ELI G
Sbjct: 3 MKYVAAYLMCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDGLK 62
Query: 252 KLSSM 266
KL ++
Sbjct: 63 KLQNI 67
>UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 131
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = +3
Query: 69 KMRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGR 248
KM+YVAAY L L G + P+ ADV+ ++ SV D+ KL ++ + GKN+E++I+AG
Sbjct: 23 KMKYVAAYALLALNG-SQPSEADVKALIESVNGTVDATKLSSFMNVIKGKNIEDVIKAGL 81
Query: 249 GKLSSM 266
K+ ++
Sbjct: 82 SKVGNI 87
>UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P2 (NY-REN-44 antigen); n=5;
Mammalia|Rep: PREDICTED: similar to 60S acidic ribosomal
protein P2 (NY-REN-44 antigen) - Homo sapiens
Length = 81
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/49 (55%), Positives = 38/49 (77%)
Frame = +3
Query: 120 SPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 266
S +A D++KIL VG+EA + L KVISELNGKN+E++I G G+L+S+
Sbjct: 5 SLSAKDIKKILDRVGMEATDDWLNKVISELNGKNIEDIIAQGIGELASV 53
>UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 154.t00025 - Entamoeba histolytica HM-1:IMSS
Length = 109
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+Y+AAY+L +G + + A V++ILS+ G E D K+K+V +NGKNV E+IE R
Sbjct: 1 MQYIAAYILCTIGHEHAEEAK-VKEILSAAGAEIDEAKIKEVFDAMNGKNVWEVIELERN 59
Query: 252 K 254
K
Sbjct: 60 K 60
>UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P2-B -
Trypanosoma cruzi
Length = 112
Score = 55.2 bits (127), Expect = 7e-07
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M+Y+AAY LA L K +P AADVE I + GIE +S+ L V+ + G++V L+ G
Sbjct: 3 MKYLAAYALASLN-KPTPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAA 61
Query: 252 KLSSM 266
K+S++
Sbjct: 62 KMSAV 66
>UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;
Eukaryota|Rep: 60S acidic ribosomal protein P2-2 -
Leishmania infantum
Length = 111
Score = 53.2 bits (122), Expect = 3e-06
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +3
Query: 75 RYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGK 254
+Y+AAY LA L KASP+ ADVE I +V I+ D L V+ + G++V LI G K
Sbjct: 4 KYLAAYALASLS-KASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAK 62
Query: 255 LSSM 266
+S+M
Sbjct: 63 MSAM 66
>UniRef50_UPI0000F2D36E Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 88
Score = 46.0 bits (104), Expect = 4e-04
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKV 197
M Y AAYLLAVLG P + D++KI + G+EAD E LK +
Sbjct: 1 MHYEAAYLLAVLGSNDCPNSKDLKKIQDNFGLEADEEWLKAI 42
>UniRef50_A0EGR2 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 124
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +3
Query: 78 YVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKL 257
YVA Y L +LGG SP DV +L IE + +++ +I L K++ ++I+ G+ K+
Sbjct: 60 YVATYALLLLGGNKSPTMYDVAYVLRQADIEPNLPEIEALIKSLKYKDLNQVIKEGKLKM 119
Query: 258 SSM 266
+
Sbjct: 120 PQL 122
>UniRef50_Q8CHJ1-2 Cluster: Isoform 2 of Q8CHJ1 ; n=1; Rattus
norvegicus|Rep: Isoform 2 of Q8CHJ1 - Rattus norvegicus
(Rat)
Length = 107
Score = 37.1 bits (82), Expect = 0.19
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +3
Query: 105 LGGKASPAAADVEKILSSVGIEADSEKLKKVIS 203
L G +SP+A D++KIL S+GI+ ++L KV++
Sbjct: 45 LRGNSSPSAKDIKKILDSMGIKVGGDQLNKVVT 77
>UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_25,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 151
Score = 35.5 bits (78), Expect = 0.57
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 18 RRTFCFRQYTFRVLAT*KMRYVAAYLLAVLGGKASPAAAD-VEKILSSVGIEADSEKLKK 194
+ F F+ ++A + AY +L G +P AD VEK+ G+ +
Sbjct: 33 KEIFQFKNIIINIMA--QQPQAVAYAALLLAGSNTPLTADNVEKLTKKAGVNVPKQLAAA 90
Query: 195 VISELNGKNVEELIEAGRGKLSS 263
+ GK++ L+ G G+ S+
Sbjct: 91 FVKAFEGKDILSLLSVGGGQGSA 113
>UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF54;
n=1; Ignicoccus hospitalis KIN4/I|Rep: Protein of
unknown function DUF54 - Ignicoccus hospitalis KIN4/I
Length = 147
Score = 35.1 bits (77), Expect = 0.76
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 99 AVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVE 227
A G S A DVE L ++ +E ++E +KKVI+ L GK E
Sbjct: 91 AAYAGTPSLAEEDVESPLGAITVEVEAEDVKKVIAWLTGKEGE 133
>UniRef50_A5FKG8 Cluster: Peptidase S41; n=1; Flavobacterium
johnsoniae UW101|Rep: Peptidase S41 - Flavobacterium
johnsoniae UW101
Length = 547
Score = 34.7 bits (76), Expect = 1.0
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 138 VEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGR 248
+ +IL EAD+ K+ VI+++NGK ++ELIE R
Sbjct: 251 ITEILGDSLAEADNIKIGTVITKINGKTIKELIEQNR 287
>UniRef50_Q7QU71 Cluster: GLP_226_29764_29144; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29764_29144 - Giardia lamblia
ATCC 50803
Length = 206
Score = 32.3 bits (70), Expect = 5.4
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 163 PTELRIFSTSAAAGDALPPNTASKYAA 83
PT IFS SA AG LPP A +YAA
Sbjct: 34 PTAAIIFSMSATAGSFLPPILARRYAA 60
>UniRef50_A2DUR6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 216
Score = 32.3 bits (70), Expect = 5.4
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 138 VEKILSSVGIEADSEKLKKVISELNGKNVEELIEA 242
+ KIL+S E D K+K ++S G+ ++ELI+A
Sbjct: 148 IRKILASCDYERDLSKIKSILSSEIGEKMDELIDA 182
>UniRef50_UPI0000F2C139 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 87
Score = 31.9 bits (69), Expect = 7.1
Identities = 25/64 (39%), Positives = 32/64 (50%)
Frame = +3
Query: 72 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 251
M Y AAYLLAVL S + D EK S++ + S S K +E+LI R
Sbjct: 1 MHYEAAYLLAVLDSNDSLISKDWEKTASALR-QIKSGSRSSASSA--AKTMEDLIVQRRS 57
Query: 252 KLSS 263
KL+S
Sbjct: 58 KLTS 61
>UniRef50_A5ZS39 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 378
Score = 31.9 bits (69), Expect = 7.1
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 144 KILSSVGIEADSEKLKKVISELNGKNVEELIEAG 245
K + S I+ + E K+ IS NGKN+ ELI+AG
Sbjct: 122 KSMCSTDIDFECEYKKQNISYTNGKNLAELIQAG 155
>UniRef50_A5AI63 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 417
Score = 31.9 bits (69), Expect = 7.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 120 SPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKL 257
SP+ + I+SS G+E D EK+K ++ N+ E E + K+
Sbjct: 152 SPSVVFLGFIVSSKGVETDPEKIKAIVDXPVPTNIHEAFEEIKSKM 197
>UniRef50_A2WTB1 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 76
Score = 31.5 bits (68), Expect = 9.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 123 PAAADVEKILSSVGIEADSEKLKKVISELNGKN 221
P V KI+ +V IEADS + K ++ L GK+
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,355,963
Number of Sequences: 1657284
Number of extensions: 4728800
Number of successful extensions: 13675
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 13475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13668
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -