Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_L08
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    28   0.041
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    26   0.22 
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.38 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.38 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.38 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.38 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.38 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.7  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.2  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 0.041
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = -2

Query: 408 LAMHVLLVQSTVEYLQVTASAVDVLFVLHTELYHQRFALIAEWLEFPR*GVEPRVF 241
           L  H   +++  E+L      VD +   H ++Y      + +W++ PR   E + F
Sbjct: 422 LYFHAAWLKNNPEFLDAFLYWVDEILANHNDVYFVTMTQVIQWIQNPRTITESKNF 477


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -2

Query: 375 VEYLQVTASAVDVLFVLHTELYHQRFALI 289
           V+Y ++  S  +++F ++T +  +RF LI
Sbjct: 36  VQYPRIVVSTFNIVFYMYTLILEERFKLI 64


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 277 KPFSNEGKPLVVQFSVKHEQDID 345
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 277 KPFSNEGKPLVVQFSVKHEQDID 345
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 277 KPFSNEGKPLVVQFSVKHEQDID 345
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 277 KPFSNEGKPLVVQFSVKHEQDID 345
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 277 KPFSNEGKPLVVQFSVKHEQDID 345
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 9   DGACCELKNEICSAGYCQFIGNFVNKL 89
           +GA C +  + CS   C+  G+ V+++
Sbjct: 99  EGALCNINTDDCSPNPCRNNGSCVDRI 125


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 131 SHESSENFSSKNTSQFIDEIANK 63
           S E S  FSSK +   +DE++ K
Sbjct: 153 SLEKSGLFSSKTSEHSVDELSGK 175


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 335 CSCFTLNCTTKG 300
           CS + +NCT KG
Sbjct: 222 CSLWFINCTAKG 233


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 335 CSCFTLNCTTKG 300
           CS + +NCT KG
Sbjct: 222 CSLWFINCTAKG 233


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 36  EICSAGYCQFI 68
           E+C+AGY  FI
Sbjct: 292 EVCNAGYLPFI 302


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 262 GRRTSRLQMSVNLYPPLRHCRTFQ 191
           G  T  ++  +  YPP+ +C+  Q
Sbjct: 31  GLDTEEIKDLLQKYPPIANCKLVQ 54


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 12  GACCELKNEICSAGYCQFIGNFVNKL 89
           G  CE+  + C  G C   G  ++K+
Sbjct: 254 GYICEINVDDCRPGACHNNGTCLDKV 279


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 356 PPPQSMSCSCFTLNCTTKGLP 294
           PPP S+     ++ C T G P
Sbjct: 214 PPPGSLGSMGVSVPCGTSGNP 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,697
Number of Sequences: 336
Number of extensions: 2804
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)