Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_L08
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.   255   5e-70
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.9  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   5.8  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   5.8  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score =  255 bits (625), Expect = 5e-70
 Identities = 111/139 (79%), Positives = 122/139 (87%)
 Frame = +1

Query: 85  NCEVFFEEKFSDDSWESNWVYSEHPGKEFGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 264
           N +V+FEE F DDSW+  WV SEH G E+GKF  TAGKFYNDAEADKGLQTS+DARFYAL
Sbjct: 15  NAKVYFEEGFKDDSWQKTWVQSEHKGVEYGKFVHTAGKFYNDAEADKGLQTSQDARFYAL 74

Query: 265 SRKFKPFSNEGKPLVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDIC 444
           S KF PFSN+   LV+QFSVKHEQ+IDCGGGYLKVFDC +DQKD+HGETPY +MFGPDIC
Sbjct: 75  SNKFTPFSNKDDTLVIQFSVKHEQNIDCGGGYLKVFDCSVDQKDLHGETPYLVMFGPDIC 134

Query: 445 GPGTKKVHVIFSYKGKNHL 501
           GPGTKKVHVIFSYKGKNHL
Sbjct: 135 GPGTKKVHVIFSYKGKNHL 153


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -2

Query: 210  VIVELSSSQFELAEFFSGVFTI 145
            +I+ L S+ FEL+++  G++ +
Sbjct: 1243 IIISLRSNMFELSDYLVGIYKV 1264


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -1

Query: 475 RSREPSLYQDHRYQAQT*SRRVSRHACPSGPVYSRIPSGNRLRSRCPVRASH*TVP 308
           RSR  SL +  R ++++ SR VSR         SR  S +R RS+     S    P
Sbjct: 407 RSRSKSLSKSSRSRSRSLSRSVSRSRSRGSRSRSR-TSQSRSRSKTRTSRSRSRTP 461


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 175 CRILFRGVHYIPNLIPMNRL 116
           C    R +  +PNLIP NRL
Sbjct: 447 CAKADRKLFEVPNLIPWNRL 466


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,844
Number of Sequences: 2352
Number of extensions: 11445
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)