Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_L05
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.    27   0.40 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.6  

>AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.
          Length = 140

 Score = 27.1 bits (57), Expect = 0.40
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -2

Query: 253 ILDIPADLIMTIASLEDLKISKFLIS---FNAFERWSSEC--SLLRDSRYC 116
           + +IP   ++T    ED+K +K + S   FNA+  W   C    L D R C
Sbjct: 89  LCNIPCQNLLTDDISEDIKCAKMVYSHHGFNAWYGWVDHCRGKALPDIREC 139


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = -2

Query: 265  KHCTILDIPADLIMTIASLEDLKISKFLISFNAFERWSSECSLLRDSRYCSVSCVDIFIT 86
            K+ ++L++   L +    +E  K+ +    FN  +  +SE     +    SV+ + +F+T
Sbjct: 1680 KNNSVLEVHQVLQLLDTHVE--KLDRLFKEFNVLDTQASELVQTAEMDELSVNIIWLFVT 1737

Query: 85   N 83
            N
Sbjct: 1738 N 1738


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,395
Number of Sequences: 2352
Number of extensions: 9507
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)