Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L05
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74996-1|CAA99284.1| 2157|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34822-1|CAA84353.1| 2173|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34821-1|CAA84352.1| 2186|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34820-1|CAA84351.1| 2155|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34819-1|CAA84350.1| 2166|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34818-1|CAA84349.1| 2158|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34817-1|CAA84348.1| 2139|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34816-1|CAA84347.1| 2138|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34815-1|CAA84346.1| 2138|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34814-1|CAA84345.1| 2127|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34813-1|CAA84344.1| 2146|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34812-1|CAA84343.1| 2146|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34811-1|CAA84342.1| 2157|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34810-1|CAA84341.1| 2138|Homo sapiens voltage-dependent L-type ... 31 3.4
Z34809-1|CAA84340.1| 2138|Homo sapiens voltage-dependent L-type ... 31 3.4
M92269-1|AAA17030.1| 2221|Homo sapiens L-type calcium channel (H... 31 3.4
L29536-1|AAA51901.1| 2109|Homo sapiens calcium channel L-type al... 31 3.4
L29534-1|AAA51900.1| 2144|Homo sapiens cardiac L-type voltage-de... 31 3.4
L29529-1|AAA51899.1| 2169|Homo sapiens L-type voltage-dependent ... 31 3.4
L04569-1|AAA02501.1| 2180|Homo sapiens L-type voltage-dependent ... 31 3.4
AY830713-1|AAX37356.1| 2179|Homo sapiens voltage-dependent L-typ... 31 3.4
AY830712-1|AAX37355.1| 2157|Homo sapiens voltage-dependent L-typ... 31 3.4
AY830711-1|AAX37354.1| 2144|Homo sapiens voltage-dependent L-typ... 31 3.4
AJ224873-1|CAA12174.1| 2138|Homo sapiens voltage-dependent L-typ... 31 3.4
AF465484-1|AAM70049.1| 2138|Homo sapiens jejunum L-type calcium ... 31 3.4
AB209016-1|BAD92253.1| 840|Homo sapiens Voltage-dependent L-typ... 31 3.4
D86407-2|BAA21825.1| 793|Homo sapiens ApoER2delta4-7 protein. 29 8.0
D86407-1|BAA21824.1| 963|Homo sapiens ApoER2 protein. 29 8.0
D50678-1|BAA09328.1| 963|Homo sapiens apolipoprotein E receptor... 29 8.0
BC051836-1|AAH51836.2| 904|Homo sapiens low density lipoprotein... 29 8.0
BC006443-1|AAH06443.1| 244|Homo sapiens Similar to low density ... 29 8.0
AL606760-4|CAI18908.1| 963|Homo sapiens low density lipoprotein... 29 8.0
AL606760-2|CAI18910.1| 904|Homo sapiens low density lipoprotein... 29 8.0
AL355483-3|CAI22781.1| 963|Homo sapiens low density lipoprotein... 29 8.0
AL355483-1|CAI22780.1| 904|Homo sapiens low density lipoprotein... 29 8.0
>Z74996-1|CAA99284.1| 2157|Homo sapiens voltage-dependent L-type
calcium channel alpha 1C protein.
Length = 2157
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34822-1|CAA84353.1| 2173|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2173
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34821-1|CAA84352.1| 2186|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2186
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 1007 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1063
>Z34820-1|CAA84351.1| 2155|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2155
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34819-1|CAA84350.1| 2166|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2166
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34818-1|CAA84349.1| 2158|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2158
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 1007 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1063
>Z34817-1|CAA84348.1| 2139|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2139
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34816-1|CAA84347.1| 2138|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2138
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34815-1|CAA84346.1| 2138|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2138
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34814-1|CAA84345.1| 2127|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2127
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34813-1|CAA84344.1| 2146|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2146
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34812-1|CAA84343.1| 2146|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2146
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34811-1|CAA84342.1| 2157|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2157
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34810-1|CAA84341.1| 2138|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2138
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>Z34809-1|CAA84340.1| 2138|Homo sapiens voltage-dependent L-type Ca
channel alpha 1 subunit protein.
Length = 2138
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>M92269-1|AAA17030.1| 2221|Homo sapiens L-type calcium channel (HFCC)
protein.
Length = 2221
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 1007 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1063
>L29536-1|AAA51901.1| 2109|Homo sapiens calcium channel L-type alpha 1
subunit protein.
Length = 2109
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 958 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1014
>L29534-1|AAA51900.1| 2144|Homo sapiens cardiac L-type
voltage-dependent calcium channel a1 subunit protein.
Length = 2144
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 958 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1014
>L29529-1|AAA51899.1| 2169|Homo sapiens L-type voltage-dependent
cardiac calcium channel alpha 1 subunit protein.
Length = 2169
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 958 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1014
>L04569-1|AAA02501.1| 2180|Homo sapiens L-type voltage-dependent
calcium channel protein.
Length = 2180
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 958 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1014
>AY830713-1|AAX37356.1| 2179|Homo sapiens voltage-dependent L-type
calcium channel alpha-1C subunit splice variant protein.
Length = 2179
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>AY830712-1|AAX37355.1| 2157|Homo sapiens voltage-dependent L-type
calcium channel alpha-1C subunit splice variant protein.
Length = 2157
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>AY830711-1|AAX37354.1| 2144|Homo sapiens voltage-dependent L-type
calcium channel alpha-1C subunit splice variant protein.
Length = 2144
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>AJ224873-1|CAA12174.1| 2138|Homo sapiens voltage-dependent L-type
calcium channel alpha-1Ced channel hHCN2 protein.
Length = 2138
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>AF465484-1|AAM70049.1| 2138|Homo sapiens jejunum L-type calcium
channel alpha1C subunit protein.
Length = 2138
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 987 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 1043
>AB209016-1|BAD92253.1| 840|Homo sapiens Voltage-dependent L-type
calcium channel alpha-1C subunit variant protein.
Length = 840
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 RSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQC--LNLKTEANIDLTCEVLKICF 323
+S A+N +K L + + R I R+ G+ +VQC + ++T NI + +L+ F
Sbjct: 548 QSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMF 604
>D86407-2|BAA21825.1| 793|Homo sapiens ApoER2delta4-7 protein.
Length = 793
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -2
Query: 529 TPTSLSPTSCATATYTSMYSGIGNRLGSFVMAL*TWSIASLRTQSLSCLSKYII 368
+P++LSP AT+ ++ Y+ +++GS V A I + +L C+S Y+I
Sbjct: 627 SPSTLSP---ATSNHSQHYANEDSKMGSTVTAAVIGIIVPIVVIALLCMSGYLI 677
>D86407-1|BAA21824.1| 963|Homo sapiens ApoER2 protein.
Length = 963
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -2
Query: 529 TPTSLSPTSCATATYTSMYSGIGNRLGSFVMAL*TWSIASLRTQSLSCLSKYII 368
+P++LSP AT+ ++ Y+ +++GS V A I + +L C+S Y+I
Sbjct: 797 SPSTLSP---ATSNHSQHYANEDSKMGSTVTAAVIGIIVPIVVIALLCMSGYLI 847
>D50678-1|BAA09328.1| 963|Homo sapiens apolipoprotein E receptor 2
precursor protein.
Length = 963
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -2
Query: 529 TPTSLSPTSCATATYTSMYSGIGNRLGSFVMAL*TWSIASLRTQSLSCLSKYII 368
+P++LSP AT+ ++ Y+ +++GS V A I + +L C+S Y+I
Sbjct: 797 SPSTLSP---ATSNHSQHYANEDSKMGSTVTAAVIGIIVPIVVIALLCMSGYLI 847
>BC051836-1|AAH51836.2| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -2
Query: 529 TPTSLSPTSCATATYTSMYSGIGNRLGSFVMAL*TWSIASLRTQSLSCLSKYII 368
+P++LSP AT+ ++ Y+ +++GS V A I + +L C+S Y+I
Sbjct: 797 SPSTLSP---ATSNHSQHYANEDSKMGSTVTAAVIGIIVPIVVIALLCMSGYLI 847
>BC006443-1|AAH06443.1| 244|Homo sapiens Similar to low density
lipoprotein receptor-related protein 8, apolipoprotein e
protein.
Length = 244
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -2
Query: 529 TPTSLSPTSCATATYTSMYSGIGNRLGSFVMAL*TWSIASLRTQSLSCLSKYII 368
+P++LSP AT+ ++ Y+ +++GS V A I + +L C+S Y+I
Sbjct: 78 SPSTLSP---ATSNHSQHYANEDSKMGSTVTAAVIGIIVPIVVIALLCMSGYLI 128
>AL606760-4|CAI18908.1| 963|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 963
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -2
Query: 529 TPTSLSPTSCATATYTSMYSGIGNRLGSFVMAL*TWSIASLRTQSLSCLSKYII 368
+P++LSP AT+ ++ Y+ +++GS V A I + +L C+S Y+I
Sbjct: 797 SPSTLSP---ATSNHSQHYANEDSKMGSTVTAAVIGIIVPIVVIALLCMSGYLI 847
>AL606760-2|CAI18910.1| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -2
Query: 529 TPTSLSPTSCATATYTSMYSGIGNRLGSFVMAL*TWSIASLRTQSLSCLSKYII 368
+P++LSP AT+ ++ Y+ +++GS V A I + +L C+S Y+I
Sbjct: 797 SPSTLSP---ATSNHSQHYANEDSKMGSTVTAAVIGIIVPIVVIALLCMSGYLI 847
>AL355483-3|CAI22781.1| 963|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 963
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -2
Query: 529 TPTSLSPTSCATATYTSMYSGIGNRLGSFVMAL*TWSIASLRTQSLSCLSKYII 368
+P++LSP AT+ ++ Y+ +++GS V A I + +L C+S Y+I
Sbjct: 797 SPSTLSP---ATSNHSQHYANEDSKMGSTVTAAVIGIIVPIVVIALLCMSGYLI 847
>AL355483-1|CAI22780.1| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -2
Query: 529 TPTSLSPTSCATATYTSMYSGIGNRLGSFVMAL*TWSIASLRTQSLSCLSKYII 368
+P++LSP AT+ ++ Y+ +++GS V A I + +L C+S Y+I
Sbjct: 797 SPSTLSP---ATSNHSQHYANEDSKMGSTVTAAVIGIIVPIVVIALLCMSGYLI 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,196,655
Number of Sequences: 237096
Number of extensions: 1227981
Number of successful extensions: 2353
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2353
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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