Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L05
(542 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113377-1|AAM29382.1| 431|Drosophila melanogaster RE01730p pro... 29 5.4
AY060922-1|AAL28470.1| 430|Drosophila melanogaster GM06507p pro... 29 5.4
AE013599-3358|AAM68213.1| 431|Drosophila melanogaster CG3074-PB... 29 5.4
AE013599-3357|AAF46818.2| 431|Drosophila melanogaster CG3074-PA... 29 5.4
AY069368-1|AAL39513.1| 640|Drosophila melanogaster LD07457p pro... 28 7.2
AE014298-1856|AAF48236.3| 506|Drosophila melanogaster CG12096-P... 28 7.2
AE014296-2179|AAN11855.2| 640|Drosophila melanogaster CG10984-P... 28 7.2
AE014296-2178|AAF49889.2| 640|Drosophila melanogaster CG10984-P... 28 7.2
AE014296-2177|AAN11854.2| 658|Drosophila melanogaster CG10984-P... 28 7.2
BT021951-1|AAX51656.1| 1732|Drosophila melanogaster LD01527p pro... 28 9.5
AE014297-3185|AAF56020.2| 337|Drosophila melanogaster CG33110-P... 28 9.5
AE014134-2995|AAF53722.3| 1732|Drosophila melanogaster CG18397-P... 28 9.5
>AY113377-1|AAM29382.1| 431|Drosophila melanogaster RE01730p
protein.
Length = 431
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 178 SFNAFERWSSECSLLRDSRYCSVSCV 101
SFNA ++WSS S + D +C S V
Sbjct: 190 SFNALDKWSSYISEVPDQGWCGASWV 215
>AY060922-1|AAL28470.1| 430|Drosophila melanogaster GM06507p
protein.
Length = 430
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 178 SFNAFERWSSECSLLRDSRYCSVSCV 101
SFNA ++WSS S + D +C S V
Sbjct: 190 SFNALDKWSSYISEVPDQGWCGASWV 215
>AE013599-3358|AAM68213.1| 431|Drosophila melanogaster CG3074-PB,
isoform B protein.
Length = 431
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 178 SFNAFERWSSECSLLRDSRYCSVSCV 101
SFNA ++WSS S + D +C S V
Sbjct: 190 SFNALDKWSSYISEVPDQGWCGASWV 215
>AE013599-3357|AAF46818.2| 431|Drosophila melanogaster CG3074-PA,
isoform A protein.
Length = 431
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 178 SFNAFERWSSECSLLRDSRYCSVSCV 101
SFNA ++WSS S + D +C S V
Sbjct: 190 SFNALDKWSSYISEVPDQGWCGASWV 215
>AY069368-1|AAL39513.1| 640|Drosophila melanogaster LD07457p
protein.
Length = 640
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 96 MSTHDTEQYRESLNKLHSEDQRSKALNDIKNLLIFKSS 209
+S H++ Q S+ +D+ K ND KNL + +SS
Sbjct: 259 ISPHESPQKSNSICSTALDDKNIKLFNDEKNLRVLRSS 296
>AE014298-1856|AAF48236.3| 506|Drosophila melanogaster CG12096-PA
protein.
Length = 506
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/111 (18%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = +3
Query: 132 LNKLHSEDQRSKALNDIKNLLIFKSSRDAIVIIRSAGISKIVQCLNLKTEANI------D 293
L L S+ QR AL + + + +++ +I R ++ C N ++++ D
Sbjct: 12 LKALESKPQRLDALTAMNSAIAKEAALPRQIIERLLTTDQLYDCANPAADSHVPKDQAVD 71
Query: 294 LTCEVLKICFDKFEPGDVIKNYTGHMMYLLRHDKDCVRRLAIDQVYKAITK 446
+T E+L C D+ + + + L H +R + ++K + +
Sbjct: 72 VTLELLCHCLDQLAMDTADEQLSSLLRRGLTHSNPALRAQVLASLFKKLLR 122
>AE014296-2179|AAN11855.2| 640|Drosophila melanogaster CG10984-PC,
isoform C protein.
Length = 640
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 96 MSTHDTEQYRESLNKLHSEDQRSKALNDIKNLLIFKSS 209
+S H++ Q S+ +D+ K ND KNL + +SS
Sbjct: 259 ISPHESPQKSNSICSTALDDKNIKLFNDEKNLRVLRSS 296
>AE014296-2178|AAF49889.2| 640|Drosophila melanogaster CG10984-PA,
isoform A protein.
Length = 640
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 96 MSTHDTEQYRESLNKLHSEDQRSKALNDIKNLLIFKSS 209
+S H++ Q S+ +D+ K ND KNL + +SS
Sbjct: 259 ISPHESPQKSNSICSTALDDKNIKLFNDEKNLRVLRSS 296
>AE014296-2177|AAN11854.2| 658|Drosophila melanogaster CG10984-PB,
isoform B protein.
Length = 658
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 96 MSTHDTEQYRESLNKLHSEDQRSKALNDIKNLLIFKSS 209
+S H++ Q S+ +D+ K ND KNL + +SS
Sbjct: 277 ISPHESPQKSNSICSTALDDKNIKLFNDEKNLRVLRSS 314
>BT021951-1|AAX51656.1| 1732|Drosophila melanogaster LD01527p protein.
Length = 1732
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 90 IKMSTHDTEQY-RESLNKLHSEDQRSKALNDIKNL 191
++ + + EQY ++ + K H E+++ K +N IKN+
Sbjct: 1064 LQRAAENREQYLKQIIEKAHDEEKKLKEINFIKNI 1098
>AE014297-3185|AAF56020.2| 337|Drosophila melanogaster CG33110-PA
protein.
Length = 337
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +3
Query: 267 NLKTEANIDLTCEVLKICFDKFEPGDVIKNYTG 365
N + + ++ E+ I D+F+ + +NYTG
Sbjct: 7 NYNSSSRFEMVVEIANIALDEFKTHHITRNYTG 39
>AE014134-2995|AAF53722.3| 1732|Drosophila melanogaster CG18397-PA
protein.
Length = 1732
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 90 IKMSTHDTEQY-RESLNKLHSEDQRSKALNDIKNL 191
++ + + EQY ++ + K H E+++ K +N IKN+
Sbjct: 1064 LQRAAENREQYLKQIIEKAHDEEKKLKEINFIKNI 1098
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,762,773
Number of Sequences: 53049
Number of extensions: 387579
Number of successful extensions: 1197
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -