Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L05
(542 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 26 0.22
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 26 0.22
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 26 0.22
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 26 0.22
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 26 0.22
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 26 0.22
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 26 0.22
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 1.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 1.5
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 3.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 4.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.1
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 251 FRYSSRSNYDNSIP*RFKN*QIFNII 174
++YS+ +NY+N+ +K Q +NII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 251 FRYSSRSNYDNSIP*RFKN*QIFNII 174
++YS+ +NY+N+ +K Q +NII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 251 FRYSSRSNYDNSIP*RFKN*QIFNII 174
++YS+ +NY+N+ +K Q +NII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 251 FRYSSRSNYDNSIP*RFKN*QIFNII 174
++YS+ +NY+N+ +K Q +NII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 251 FRYSSRSNYDNSIP*RFKN*QIFNII 174
++YS+ +NY+N+ +K Q +NII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 251 FRYSSRSNYDNSIP*RFKN*QIFNII 174
++YS+ +NY+N+ +K Q +NII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 251 FRYSSRSNYDNSIP*RFKN*QIFNII 174
++YS+ +NY+N+ +K Q +NII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 306 VLKICFDKFEPGDVI--KNYTGHMMYLLR 386
V K+ ++ F+PGD+I + G MY ++
Sbjct: 469 VTKLRYEVFQPGDIIIKEGTIGSKMYFIQ 497
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 306 VLKICFDKFEPGDVI--KNYTGHMMYLLR 386
V K+ ++ F+PGD+I + G MY ++
Sbjct: 437 VTKLRYEVFQPGDIIIKEGTIGSKMYFIQ 465
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 180 IKNLLIFKSSRDAIVIIRSAGISK 251
IKN++ S D V+I +AGI +
Sbjct: 99 IKNMITGTSQADCAVLIVAAGIGE 122
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 4.6
Identities = 5/10 (50%), Positives = 10/10 (100%)
Frame = -1
Query: 113 CIVCRHFYYK 84
C+VC++F+Y+
Sbjct: 194 CVVCQNFFYQ 203
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 8.1
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -2
Query: 55 NKIRSDKVKKTTFI 14
N++ SD+V +TTF+
Sbjct: 319 NRLGSDRVDETTFL 332
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,182
Number of Sequences: 438
Number of extensions: 2774
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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