Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L04
(352 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18621 Cluster: 60S ribosomal protein L17; n=135; Eukar... 158 2e-38
UniRef50_Q9BL19 Cluster: Ribosomal protein, large subunit protei... 148 3e-35
UniRef50_Q5DHE6 Cluster: SJCHGC09296 protein; n=5; Bilateria|Rep... 128 2e-29
UniRef50_A7QP86 Cluster: Chromosome chr1 scaffold_136, whole gen... 126 8e-29
UniRef50_O48557 Cluster: 60S ribosomal protein L17; n=53; Eukary... 126 8e-29
UniRef50_Q93VI3 Cluster: 60S ribosomal protein L17-1; n=18; Euka... 126 1e-28
UniRef50_Q7RR03 Cluster: Ribosomal protein L22; n=1; Plasmodium ... 122 2e-27
UniRef50_Q5CVN1 Cluster: 60S ribosomal protein L17; n=9; Eukaryo... 120 5e-27
UniRef50_Q8IDI5 Cluster: Ribosomal protein L17, putative; n=5; P... 119 2e-26
UniRef50_O14339 Cluster: 60S ribosomal protein L17-A; n=4; Dikar... 115 2e-25
UniRef50_P05740 Cluster: 60S ribosomal protein L17-A; n=27; Euka... 111 2e-24
UniRef50_Q7TPJ7 Cluster: Ac2-210; n=3; Eutheria|Rep: Ac2-210 - R... 96 1e-19
UniRef50_UPI00015601D6 Cluster: PREDICTED: hypothetical protein;... 90 8e-18
UniRef50_Q8SRH7 Cluster: 60S RIBOSOMAL PROTEIN L17; n=1; Encepha... 88 3e-17
UniRef50_Q8WTK4 Cluster: Ribosomal protein, large subunit protei... 81 4e-17
UniRef50_A7PPU4 Cluster: Chromosome chr18 scaffold_24, whole gen... 85 4e-16
UniRef50_Q7QWE4 Cluster: GLP_336_28895_29389; n=1; Giardia lambl... 84 7e-16
UniRef50_Q98S09 Cluster: 60S ribosomal protein L17; n=1; Guillar... 79 3e-14
UniRef50_A2DM53 Cluster: Ribosomal protein L22, putative; n=1; T... 70 1e-11
UniRef50_Q8TX36 Cluster: 50S ribosomal protein L22P; n=7; Archae... 67 9e-11
UniRef50_O28359 Cluster: 50S ribosomal protein L22P; n=6; Euryar... 66 1e-10
UniRef50_Q0W1Y4 Cluster: 50S ribosomal protein L22P; n=4; Archae... 65 4e-10
UniRef50_A0RVX8 Cluster: Ribosomal protein L22; n=2; Thermoprote... 65 4e-10
UniRef50_Q9YF76 Cluster: 50S ribosomal protein L22P; n=2; Desulf... 62 2e-09
UniRef50_Q9V1U0 Cluster: 50S ribosomal protein L22P; n=6; Euryar... 56 2e-07
UniRef50_UPI0001553410 Cluster: PREDICTED: hypothetical protein;... 56 2e-07
UniRef50_Q9UXA2 Cluster: 50S ribosomal protein L22P; n=5; Thermo... 55 3e-07
UniRef50_Q2FT36 Cluster: 50S ribosomal protein L22P; n=4; Methan... 51 6e-06
UniRef50_P62650 Cluster: 50S ribosomal protein L22P; n=1; Nanoar... 50 1e-05
UniRef50_Q9HIR4 Cluster: 50S ribosomal protein L22P; n=5; Thermo... 48 3e-05
UniRef50_P15008 Cluster: 50S ribosomal protein L22P; n=6; Haloba... 48 3e-05
UniRef50_A5AXX3 Cluster: Putative uncharacterized protein; n=1; ... 46 2e-04
UniRef50_Q2QAS6 Cluster: Ribosomal protein L22; n=2; environment... 44 5e-04
UniRef50_UPI0000F1E090 Cluster: PREDICTED: hypothetical protein;... 32 3.1
UniRef50_Q6RSH3 Cluster: Complement related-short precursor; n=3... 31 4.1
UniRef50_UPI00004D52A1 Cluster: Coiled-coil domain-containing pr... 31 5.4
UniRef50_UPI000023E92E Cluster: hypothetical protein FG09173.1; ... 31 7.2
UniRef50_Q9P2F3 Cluster: KIAA1394 protein; n=17; Tetrapoda|Rep: ... 30 9.5
UniRef50_Q8N467 Cluster: KIAA1394 protein; n=3; Eutheria|Rep: KI... 30 9.5
UniRef50_Q2GNL0 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
UniRef50_Q5V4H1 Cluster: Branched-chain amino acid ABC transport... 30 9.5
>UniRef50_P18621 Cluster: 60S ribosomal protein L17; n=135;
Eukaryota|Rep: 60S ribosomal protein L17 - Homo sapiens
(Human)
Length = 184
Score = 158 bits (384), Expect = 2e-38
Identities = 68/96 (70%), Positives = 85/96 (88%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
P KSCK+RGSNLRVHFKNT ETA AI+ + +R+A +YLK+VT +K+C+PFRR+NGGVGRC
Sbjct: 11 PTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRC 70
Query: 245 AQAKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
AQAKQ+G T GRWPKKSAEFLL +++NA+SNA+ KG
Sbjct: 71 AQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKG 106
>UniRef50_Q9BL19 Cluster: Ribosomal protein, large subunit protein
17, isoform a; n=5; Eukaryota|Rep: Ribosomal protein,
large subunit protein 17, isoform a - Caenorhabditis
elegans
Length = 187
Score = 148 bits (358), Expect = 3e-35
Identities = 65/94 (69%), Positives = 80/94 (85%)
Frame = +2
Query: 71 KSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQ 250
KSCKARGS+LRVHFKNT+E AMA+R +PLRRA +L +V E KE +PFRRF+GG+GR AQ
Sbjct: 15 KSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRFHGGIGRAAQ 74
Query: 251 AKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
KQ+ TT GRWP KSA+FLL L++NA+SNA+YKG
Sbjct: 75 TKQWNTTQGRWPVKSADFLLDLLKNAESNAEYKG 108
>UniRef50_Q5DHE6 Cluster: SJCHGC09296 protein; n=5; Bilateria|Rep:
SJCHGC09296 protein - Schistosoma japonicum (Blood
fluke)
Length = 193
Score = 128 bits (310), Expect = 2e-29
Identities = 62/94 (65%), Positives = 72/94 (76%)
Frame = +2
Query: 68 AKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCA 247
+K+CKAR LR HFKN +E A A++ + L+RA YLKNV EKKE IPFRRFNGGVGR A
Sbjct: 14 SKTCKARIPYLRTHFKNMHECACAVKGMTLQRAQTYLKNVIEKKEIIPFRRFNGGVGRHA 73
Query: 248 QAKQFGTTHGRWPKKSAEFLLQLMRNADSNADYK 349
QAK + TT GRWPKKSA+ LLQL+ NA SN YK
Sbjct: 74 QAKVWKTTQGRWPKKSAQMLLQLLHNAFSNGVYK 107
>UniRef50_A7QP86 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 261
Score = 126 bits (305), Expect = 8e-29
Identities = 62/97 (63%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
P KSCKARG +LRVHFKNT ETA AIRKLPL +A RYL++V K+ IPF RF GVGR
Sbjct: 89 PTKSCKARGLDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLVHKQAIPFTRFCRGVGRT 148
Query: 245 AQAK-QFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
AQAK + GRWP KSA+++L L++NA+SNAD KG
Sbjct: 149 AQAKNRHSNGQGRWPVKSAKYILDLLKNAESNADLKG 185
>UniRef50_O48557 Cluster: 60S ribosomal protein L17; n=53;
Eukaryota|Rep: 60S ribosomal protein L17 - Zea mays
(Maize)
Length = 171
Score = 126 bits (305), Expect = 8e-29
Identities = 61/97 (62%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
P KS KA G +LRVHFKNT ETA A+RKLPL +A RYL++V K+ IPFRR+ GGVGR
Sbjct: 11 PTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGRT 70
Query: 245 AQAK-QFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
AQAK + GRWP KSA F+L L++NA+SNAD KG
Sbjct: 71 AQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKG 107
>UniRef50_Q93VI3 Cluster: 60S ribosomal protein L17-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L17-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 176
Score = 126 bits (303), Expect = 1e-28
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +2
Query: 71 KSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQ 250
KSCKARG++LRVHFKNT ETA AIRKLPL +A RYL++V K+ IPF RF GVGR AQ
Sbjct: 13 KSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQ 72
Query: 251 AK-QFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
AK + GRWP KSA+F+L L++NA+SNA+ KG
Sbjct: 73 AKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKG 107
>UniRef50_Q7RR03 Cluster: Ribosomal protein L22; n=1; Plasmodium
yoelii yoelii|Rep: Ribosomal protein L22 - Plasmodium
yoelii yoelii
Length = 249
Score = 122 bits (293), Expect = 2e-27
Identities = 55/93 (59%), Positives = 67/93 (72%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
P K KA +LRVHFKNTYETA AIR++ L A +YL V EKK C+PFRR+NGGVGR
Sbjct: 11 PGKCAKAAAVDLRVHFKNTYETARAIRRMNLLEAKKYLNAVIEKKRCVPFRRYNGGVGRT 70
Query: 245 AQAKQFGTTHGRWPKKSAEFLLQLMRNADSNAD 343
QAK+F T GRWP KS +FLL ++ N +NA+
Sbjct: 71 NQAKEFNHTQGRWPVKSCKFLLNVLDNVQANAE 103
>UniRef50_Q5CVN1 Cluster: 60S ribosomal protein L17; n=9;
Eukaryota|Rep: 60S ribosomal protein L17 -
Cryptosporidium parvum Iowa II
Length = 187
Score = 120 bits (290), Expect = 5e-27
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
P+KS +GS+LRV +KNTYETA AI+ + L A +YL +V KK C+PFRRFNGGVGR
Sbjct: 11 PSKSVMCKGSDLRVSYKNTYETATAIKGMYLLDARQYLLDVIAKKRCVPFRRFNGGVGRT 70
Query: 245 AQAKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
A+A +F T GR+P+KS FLL L++NA+SN D KG
Sbjct: 71 AKANEFKLTQGRFPEKSCRFLLDLLQNAESNCDMKG 106
>UniRef50_Q8IDI5 Cluster: Ribosomal protein L17, putative; n=5;
Plasmodium|Rep: Ribosomal protein L17, putative -
Plasmodium falciparum (isolate 3D7)
Length = 203
Score = 119 bits (286), Expect = 2e-26
Identities = 52/91 (57%), Positives = 66/91 (72%)
Frame = +2
Query: 71 KSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQ 250
K K G +LRVHFKNTYE A AIR++ L A +YL +V EKK C+PFR++NGGVGR Q
Sbjct: 13 KCAKGAGVDLRVHFKNTYEAARAIRRMKLLEAKKYLNDVIEKKRCVPFRKYNGGVGRTNQ 72
Query: 251 AKQFGTTHGRWPKKSAEFLLQLMRNADSNAD 343
AK+F T GRWP KS +FLL ++ N +NA+
Sbjct: 73 AKEFNHTQGRWPAKSCKFLLNILDNVQANAE 103
>UniRef50_O14339 Cluster: 60S ribosomal protein L17-A; n=4;
Dikarya|Rep: 60S ribosomal protein L17-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 187
Score = 115 bits (277), Expect = 2e-25
Identities = 51/94 (54%), Positives = 66/94 (70%)
Frame = +2
Query: 71 KSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQ 250
K KARG+ LR HFKN+ E A I + L++A +L NV E K+ +PFRRFNGGVGR AQ
Sbjct: 13 KCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQ 72
Query: 251 AKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
K+FG T RWP KS +F L++NA++NA+ KG
Sbjct: 73 GKEFGVTQARWPVKSVKFFYDLLKNAEANAEAKG 106
>UniRef50_P05740 Cluster: 60S ribosomal protein L17-A; n=27;
Eukaryota|Rep: 60S ribosomal protein L17-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 184
Score = 111 bits (268), Expect = 2e-24
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
PAKS ARGS LRV FKNT ETA AI L +A +YL+ V + + IPFRRFN +GR
Sbjct: 11 PAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRT 70
Query: 245 AQAKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
AQ K+FG T RWP KS +F+ L++NA +NA+ KG
Sbjct: 71 AQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEAKG 106
>UniRef50_Q7TPJ7 Cluster: Ac2-210; n=3; Eutheria|Rep: Ac2-210 -
Rattus norvegicus (Rat)
Length = 220
Score = 96.3 bits (229), Expect = 1e-19
Identities = 42/64 (65%), Positives = 53/64 (82%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
P KSCK+RGSNLRVHFKNT ETA AI+ + +R+A +YLK+VT KK+C+PFRR+NGGV
Sbjct: 11 PTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVESN 70
Query: 245 AQAK 256
A+ K
Sbjct: 71 AELK 74
>UniRef50_UPI00015601D6 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 191
Score = 90.2 bits (214), Expect = 8e-18
Identities = 51/94 (54%), Positives = 59/94 (62%)
Frame = +2
Query: 71 KSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQ 250
KSCK+R SNL VHFKNT ET +LK V PF +NGGVGRCAQ
Sbjct: 24 KSCKSRSSNLHVHFKNTRETV-------------FLKRV-------PFCYYNGGVGRCAQ 63
Query: 251 AKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
AKQ G T G WPK+SAEFLL ++NA+ NA+ KG
Sbjct: 64 AKQQGWTRGWWPKQSAEFLLHELKNAEGNAELKG 97
>UniRef50_Q8SRH7 Cluster: 60S RIBOSOMAL PROTEIN L17; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L17
- Encephalitozoon cuniculi
Length = 183
Score = 88.2 bits (209), Expect = 3e-17
Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 20/116 (17%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
P+K+ KA+ N +V FK T E + +R+ + A++YLKNV K EC+PFRR+N G G+
Sbjct: 12 PSKAVKAKIDNAKVSFKKTREASCTLRRRKVLDAIQYLKNVIAKTECVPFRRYNRGCGQT 71
Query: 245 AQAKQFG--------------------TTHGRWPKKSAEFLLQLMRNADSNADYKG 352
QA++F T GRWPKKSAEFL+ ++ N NA+ KG
Sbjct: 72 HQARKFSIPRREIVKANGEKKIKKGHVQTRGRWPKKSAEFLISVLENIKENAETKG 127
>UniRef50_Q8WTK4 Cluster: Ribosomal protein, large subunit protein
17, isoform b; n=48; Bilateria|Rep: Ribosomal protein,
large subunit protein 17, isoform b - Caenorhabditis
elegans
Length = 159
Score = 81.0 bits (191), Expect(2) = 4e-17
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +2
Query: 71 KSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRF 223
KSCKARGS+LRVHFKNT+E AMA+R +PLRRA +L +V E KE +PFRRF
Sbjct: 15 KSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRF 65
Score = 27.5 bits (58), Expect(2) = 4e-17
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +2
Query: 308 LQLMRNADSNADYKG 352
L L++NA+SNA+YKG
Sbjct: 66 LDLLKNAESNAEYKG 80
>UniRef50_A7PPU4 Cluster: Chromosome chr18 scaffold_24, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_24, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 330
Score = 84.6 bits (200), Expect = 4e-16
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
P K CK R S+ RVHFKNT ET A +L L A YL++ ++ +PF RF GVGR
Sbjct: 11 PTKFCKTRDSDFRVHFKNTRETTDATSRLLLTMAREYLEDAPVHEQAMPFTRFCRGVGRT 70
Query: 245 AQAK-QFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
AQAK + G KS +++L L+++A+SNAD KG
Sbjct: 71 AQAKNRHSNGQGCSSVKSVKYILVLLKHAESNADLKG 107
>UniRef50_Q7QWE4 Cluster: GLP_336_28895_29389; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_28895_29389 - Giardia lamblia
ATCC 50803
Length = 164
Score = 83.8 bits (198), Expect = 7e-16
Identities = 39/89 (43%), Positives = 56/89 (62%)
Frame = +2
Query: 80 KARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQ 259
K+R ++ FKNTY T AI+ + ++RA YL NV KE +PF +F GVGR +QA+
Sbjct: 15 KSRRDGVKASFKNTYSTCRAIKGMGVKRAFAYLDNVLNHKEIVPFFKFYKGVGRHSQARG 74
Query: 260 FGTTHGRWPKKSAEFLLQLMRNADSNADY 346
GT GRWP+KS + +++ A SNA +
Sbjct: 75 SGTDKGRWPEKSVVVVKDILKQAVSNAKH 103
>UniRef50_Q98S09 Cluster: 60S ribosomal protein L17; n=1; Guillardia
theta|Rep: 60S ribosomal protein L17 - Guillardia theta
(Cryptomonas phi)
Length = 153
Score = 78.6 bits (185), Expect = 3e-14
Identities = 37/80 (46%), Positives = 50/80 (62%)
Frame = +2
Query: 95 NLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTTH 274
N +VH KNT E I + L RA +LKNV KKE +PF+ + G+GR +Q Q
Sbjct: 14 NQKVHLKNTREVGCCIIGMTLGRAENFLKNVILKKEIVPFKVYRYGIGRKSQVNQSKNIS 73
Query: 275 GRWPKKSAEFLLQLMRNADS 334
GRWPKKSA+ +L L++N +S
Sbjct: 74 GRWPKKSAKIILSLIKNLNS 93
>UniRef50_A2DM53 Cluster: Ribosomal protein L22, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L22,
putative - Trichomonas vaginalis G3
Length = 164
Score = 70.1 bits (164), Expect = 1e-11
Identities = 34/94 (36%), Positives = 52/94 (55%)
Frame = +2
Query: 68 AKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCA 247
+K+ KA RVHFK ET I+ + + A+ YL+ V K+ +PF R+ GG+ A
Sbjct: 13 SKALKASTGLERVHFKPMMETGRVIKGMKAQDAIAYLEAVMRKERAVPFFRYKGGISHHA 72
Query: 248 QAKQFGTTHGRWPKKSAEFLLQLMRNADSNADYK 349
Q ++G RWP K AE ++L++ A + A K
Sbjct: 73 QGHEWGCPTSRWPVKCAELYIKLIKTALAGAPQK 106
>UniRef50_Q8TX36 Cluster: 50S ribosomal protein L22P; n=7;
Archaea|Rep: 50S ribosomal protein L22P - Methanopyrus
kandleri
Length = 159
Score = 66.9 bits (156), Expect = 9e-11
Identities = 35/94 (37%), Positives = 57/94 (60%)
Frame = +2
Query: 71 KSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQ 250
++ KA LR+ K+ E AIR +PL RA +L+ V K+E +PFR+ V Q
Sbjct: 20 RTAKAFIRELRISPKHAREICRAIRGMPLDRAKEFLRRVIRKEEAVPFRKHKKKVPHRRQ 79
Query: 251 AKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
+ G GR+P+K+A +L+++ +A++NA+YKG
Sbjct: 80 IRP-GWDAGRFPEKAAREILRVLEHAEANAEYKG 112
>UniRef50_O28359 Cluster: 50S ribosomal protein L22P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L22P -
Archaeoglobus fulgidus
Length = 155
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/94 (35%), Positives = 57/94 (60%)
Frame = +2
Query: 71 KSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQ 250
K+ KA G + + FK+ E AIR + A + L++V E K IPF+R V
Sbjct: 17 KAAKAMGYEMPISFKHAVEICRAIRGKKIEEARKLLEDVVEMKRAIPFKRHKKKVAHRRG 76
Query: 251 AKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
+++ GR+P+K+A+++L+++RN ++NA+YKG
Sbjct: 77 LEKWYA--GRYPQKAAKYVLKVLRNLEANAEYKG 108
>UniRef50_Q0W1Y4 Cluster: 50S ribosomal protein L22P; n=4;
Archaea|Rep: 50S ribosomal protein L22P - Uncultured
methanogenic archaeon RC-I
Length = 153
Score = 64.9 bits (151), Expect = 4e-10
Identities = 34/96 (35%), Positives = 56/96 (58%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
PA + KA + V K+ E IR + L A YL++V +KK +PF++ VG
Sbjct: 12 PATTAKAMAYEINVSPKHCQEICRQIRGMKLSAAKTYLQDVIDKKRSVPFKQHARNVGH- 70
Query: 245 AQAKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
+ Q G GR+P K++ +L+L+++A++NA+YKG
Sbjct: 71 -KRHQSGWPSGRYPVKASTEILKLLKHAEANAEYKG 105
>UniRef50_A0RVX8 Cluster: Ribosomal protein L22; n=2;
Thermoprotei|Rep: Ribosomal protein L22 - Cenarchaeum
symbiosum
Length = 152
Score = 64.9 bits (151), Expect = 4e-10
Identities = 34/96 (35%), Positives = 55/96 (57%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
P + +A ++ K+ E ++ IR + + +A +L+ V EKK +PFRRF VG
Sbjct: 13 PTRHVRASLREKQISHKHAREISLHIRGMTVEKARDFLQAVIEKKRAVPFRRFKRQVGHR 72
Query: 245 AQAKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
+ G GR+P+KSA ++L+ N +SNA+YKG
Sbjct: 73 SDP---GVMAGRYPEKSAAEFIKLLDNLESNAEYKG 105
>UniRef50_Q9YF76 Cluster: 50S ribosomal protein L22P; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L22P -
Aeropyrum pernix
Length = 156
Score = 62.5 bits (145), Expect = 2e-09
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +2
Query: 80 KARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNG-GVGRCAQAK 256
KA N+ VH K E A AI + + A RYL+ V EK+E +PFRR +G R A
Sbjct: 18 KAVLRNVPVHPKIMAEVARAISGMRVDEARRYLRAVIEKREAVPFRRAHGKQAHRRGLAD 77
Query: 257 QFGTTHGRWPKKSAEFLLQLMRNADSNADYK 349
++G GR+P K+A ++L+L+ N ++NA K
Sbjct: 78 KWGWPVGRYPVKAARYMLKLLDNVEANAANK 108
>UniRef50_Q9V1U0 Cluster: 50S ribosomal protein L22P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L22P -
Pyrococcus abyssi
Length = 155
Score = 56.0 bits (129), Expect = 2e-07
Identities = 32/96 (33%), Positives = 51/96 (53%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRC 244
P + +A G +LR+ K E +R + L A+RYL +V + +P +R+N G
Sbjct: 14 PERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALRRPVPLKRYNDSQGH- 72
Query: 245 AQAKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
K FG GR+P K A+ + +++ NA +NA KG
Sbjct: 73 KPGKGFGP--GRYPVKVAKAIKKVLLNAQNNAKQKG 106
>UniRef50_UPI0001553410 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 405
Score = 55.6 bits (128), Expect = 2e-07
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGR 241
P KSCK+ GSNL VHFKN +E + I + + LK VT K + + F+ +NGGV R
Sbjct: 76 PHKSCKSWGSNLCVHFKNIWEISQVIEGTDICKFTESLKGVTLKNQYMLFQLYNGGVNR 134
>UniRef50_Q9UXA2 Cluster: 50S ribosomal protein L22P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L22P -
Sulfolobus solfataricus
Length = 157
Score = 55.2 bits (127), Expect = 3e-07
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 71 KSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQ 250
K KA ++ ++ Y AIR + L A +L V E+KE +PF R+N G +
Sbjct: 15 KIAKAVIRDVPESIRDLYNVCKAIRGMYLNDAKDFLNRVLEEKEALPFWRYNKGASHKSN 74
Query: 251 -AKQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
+ ++ GR+PKK+ +L+++ NA++NA KG
Sbjct: 75 ISAKWKIKAGRYPKKAIRQVLKVLENAEANATNKG 109
>UniRef50_Q2FT36 Cluster: 50S ribosomal protein L22P; n=4;
Methanomicrobiales|Rep: 50S ribosomal protein L22P -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 154
Score = 50.8 bits (116), Expect = 6e-06
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +2
Query: 113 KNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTTHGRWPKK 292
K+ E A IR + L A YL+ V ++ IPF+RFN V + G GR+P+K
Sbjct: 28 KHAIEIAGFIRGMKLDDAAAYLEGVVALQKPIPFKRFNRNVPH--RKGLVGWDAGRYPQK 85
Query: 293 SAEFLLQLMRNADSNADYKG 352
++ L+L+ N NA+Y G
Sbjct: 86 ASRVYLRLLNNVRKNAEYNG 105
>UniRef50_P62650 Cluster: 50S ribosomal protein L22P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L22P -
Nanoarchaeum equitans
Length = 174
Score = 50.0 bits (114), Expect = 1e-05
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +2
Query: 80 KARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAK- 256
K NL + K+ E A IR LPL+ A L+ V +K+ +PF R+N + + +
Sbjct: 12 KLYAHNLPISTKHAVEIAKMIRYLPLQLAKEMLQKVLDKELAVPFFRYNRDIPHRKKGQI 71
Query: 257 --QFGTTHGRWPKKSAEFLLQLMRNADSNA 340
F HGR+P+ + +++L+ + + + NA
Sbjct: 72 HPYFKIKHGRFPENATKWILKELNSVEKNA 101
>UniRef50_Q9HIR4 Cluster: 50S ribosomal protein L22P; n=5;
Thermoplasmatales|Rep: 50S ribosomal protein L22P -
Thermoplasma acidophilum
Length = 151
Score = 48.4 bits (110), Expect = 3e-05
Identities = 29/91 (31%), Positives = 46/91 (50%)
Frame = +2
Query: 80 KARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQ 259
KAR + K++ A +R +PL RA + V K IP+ R+ V +
Sbjct: 17 KARIREADISLKDSVNIAHHLRGMPLSRAKEIIDAVINKTYAIPYFRYLDSVSH-----R 71
Query: 260 FGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
G GR+P K+A+ QL+ N ++NA++KG
Sbjct: 72 PGVGPGRYPVKAAKAFKQLLENVENNAEFKG 102
>UniRef50_P15008 Cluster: 50S ribosomal protein L22P; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L22P -
Halobacterium salinarium (Halobacterium halobium)
Length = 156
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/93 (30%), Positives = 48/93 (51%)
Frame = +2
Query: 74 SCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQA 253
S KA + K++ A I + A YL+ V +++ +PF++ N GVG
Sbjct: 14 SAKAMLRERSISLKHSKAIAREISGETVADAKEYLQAVIDEERSVPFKQHNSGVGHRNDI 73
Query: 254 KQFGTTHGRWPKKSAEFLLQLMRNADSNADYKG 352
G GR+P+K+++ L+L+ N +NAD +G
Sbjct: 74 D--GWDAGRYPEKASKDFLKLLSNVSNNADQQG 104
>UniRef50_A5AXX3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 467
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 65 PAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGV 235
P K C S+ RVHFKNT T A L L A YL++ +++ +PF RF G+
Sbjct: 281 PTKFCNTGDSDSRVHFKNTRVTTRATSMLLLTMARGYLEDALVREQTMPFTRFCRGI 337
>UniRef50_Q2QAS6 Cluster: Ribosomal protein L22; n=2; environmental
samples|Rep: Ribosomal protein L22 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 175
Score = 44.4 bits (100), Expect = 5e-04
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +2
Query: 83 ARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF-RRFNGGVGRCAQA-- 253
AR N +H K+ Y+ A A++ + AV YL+ V +++ IP+ RR G G A
Sbjct: 24 ARAVNRDIHHKHCYQIARAVKGMYAGDAVEYLEKVVKQEVAIPYKRRSRAGKGGNTMAGH 83
Query: 254 KQFGTTHGRWPKKSAEFLLQLMRNADSNA 340
++ GR+P+ ++ ++L+ +A NA
Sbjct: 84 RKGKMGPGRYPRNASIAFIKLIESAMDNA 112
>UniRef50_UPI0000F1E090 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 587
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 71 KSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKK 199
+SC + N ++H K T ETA A+++ L A R L + K
Sbjct: 337 RSCLSSFQNYQLHLKKTKETAQALKQKRLSEAARILSSKEANK 379
>UniRef50_Q6RSH3 Cluster: Complement related-short precursor; n=3;
Strongylocentrotus purpuratus|Rep: Complement
related-short precursor - Strongylocentrotus purpuratus
(Purple sea urchin)
Length = 595
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 298 CRFLGP-TTVCGTKLFSLCTTANSTVKTTEGNAFLLFCHI 182
C GP TTVCG + C T+ TV T G+ + CH+
Sbjct: 414 CEVTGPNTTVCGCINPTSCLTSGPTVCGTNGDYYSSECHL 453
>UniRef50_UPI00004D52A1 Cluster: Coiled-coil domain-containing
protein 37.; n=2; Xenopus tropicalis|Rep: Coiled-coil
domain-containing protein 37. - Xenopus tropicalis
Length = 553
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 80 KARGSNLRVHFKNTYETAMAIRKLPLRRAV 169
K R NL+VH K TY T M + LR+A+
Sbjct: 26 KERNKNLKVHEKTTYTTRMNAKLAGLRKAI 55
>UniRef50_UPI000023E92E Cluster: hypothetical protein FG09173.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG09173.1 - Gibberella zeae PH-1
Length = 692
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 3 NGHEVSPGRNKNGSLSREPHNLLSHVKRV 89
NG EV+ R GS SR+P L HV RV
Sbjct: 69 NGPEVNDNRQSVGSFSRDPSPLGQHVARV 97
>UniRef50_Q9P2F3 Cluster: KIAA1394 protein; n=17; Tetrapoda|Rep:
KIAA1394 protein - Homo sapiens (Human)
Length = 1003
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 112 QEHL*NCHGYKKTASS----PCCPLPKECDRKEGMHSLP 216
Q HL + HG A S PCCPL E D + +H +P
Sbjct: 684 QLHLLHHHGPPWPAPSLHAVPCCPLESEADVERAVHQVP 722
>UniRef50_Q8N467 Cluster: KIAA1394 protein; n=3; Eutheria|Rep:
KIAA1394 protein - Homo sapiens (Human)
Length = 385
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 112 QEHL*NCHGYKKTASS----PCCPLPKECDRKEGMHSLP 216
Q HL + HG A S PCCPL E D + +H +P
Sbjct: 66 QLHLLHHHGPPWPAPSLHAVPCCPLESEADVERAVHQVP 104
>UniRef50_Q2GNL0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 524
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 286 GPTTVCGTKLFSLCTTANSTVKTTE 212
GPTT CG F CT TV TE
Sbjct: 90 GPTTACGKSGFYACTVNGQTVTETE 114
>UniRef50_Q5V4H1 Cluster: Branched-chain amino acid ABC transporter
ATP-binding protein; n=1; Haloarcula marismortui|Rep:
Branched-chain amino acid ABC transporter ATP-binding
protein - Haloarcula marismortui (Halobacterium
marismortui)
Length = 270
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -1
Query: 328 SIPHELEQEFCRFLGPTTVCGTKLFSLCTTANSTVKTTEGNAFL 197
S+ ELE E C +GP T F+L T T+ TEG L
Sbjct: 19 SVDFELEAELCSLIGPNGAGKTTFFNLLT---GTLSPTEGTVEL 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,745,397
Number of Sequences: 1657284
Number of extensions: 6998870
Number of successful extensions: 16645
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 16201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16633
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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