Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L03
(324 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-l... 31 1.1
AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein. 31 1.1
AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin l... 31 1.1
AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein. 31 1.1
BC008030-1|AAH08030.1| 362|Homo sapiens PPP1R12C protein protein. 29 2.4
AL137618-1|CAB70844.1| 479|Homo sapiens hypothetical protein pr... 29 2.4
AK027086-1|BAB15651.1| 602|Homo sapiens protein ( Homo sapiens ... 29 2.4
AF312028-1|AAG60045.1| 782|Homo sapiens myosin binding subunit ... 29 2.4
AB209452-1|BAD92689.1| 736|Homo sapiens protein phosphatase 1, ... 29 2.4
AB002338-1|BAA20798.1| 1053|Homo sapiens KIAA0340 protein. 29 2.4
X59131-1|CAA41848.1| 1092|Homo sapiens hypothetical protein prot... 29 4.3
L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein... 29 4.3
BT006720-1|AAP35366.1| 350|Homo sapiens forkhead box A3 protein. 29 4.3
BC038103-1|AAH38103.1| 1092|Homo sapiens ubiquitin specific pept... 29 4.3
BC036027-1|AAH36027.1| 1092|Homo sapiens ubiquitin specific pept... 29 4.3
BC016024-1|AAH16024.1| 350|Homo sapiens forkhead box A3 protein. 29 4.3
AL138681-1|CAH70264.1| 1092|Homo sapiens ubiquitin specific pept... 29 4.3
AK223473-1|BAD97193.1| 350|Homo sapiens forkhead box A3 variant... 29 4.3
AF176114-1|AAD51980.1| 350|Homo sapiens hepatocyte nuclear fact... 29 4.3
M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collage... 28 5.6
AL138925-1|CAI15450.1| 717|Homo sapiens collagen type XIII alph... 28 5.6
AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen prot... 28 5.6
AK127038-1|BAC86798.1| 232|Homo sapiens protein ( Homo sapiens ... 28 7.4
AF328788-1|AAK28532.1| 453|Homo sapiens amnionless protein. 27 9.8
AF213668-1|AAG40147.1| 298|Homo sapiens bHLHZip transcription f... 27 9.8
>AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-like
cytoplasmic protein protein.
Length = 2517
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 137 WPR-RQPFLRRTCLYMSRTAQAWRRN 63
WP R+ RRTCL+ + AQAW R+
Sbjct: 1303 WPLFREQLCRRTCLFYTIRAQAWSRD 1328
>AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein.
Length = 2518
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 137 WPR-RQPFLRRTCLYMSRTAQAWRRN 63
WP R+ RRTCL+ + AQAW R+
Sbjct: 1303 WPLFREQLCRRTCLFYTIRAQAWSRD 1328
>AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin ligase
protein.
Length = 2517
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 137 WPR-RQPFLRRTCLYMSRTAQAWRRN 63
WP R+ RRTCL+ + AQAW R+
Sbjct: 1303 WPLFREQLCRRTCLFYTIRAQAWSRD 1328
>AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein.
Length = 1753
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 137 WPR-RQPFLRRTCLYMSRTAQAWRRN 63
WP R+ RRTCL+ + AQAW R+
Sbjct: 539 WPLFREQLCRRTCLFYTIRAQAWSRD 564
>BC008030-1|AAH08030.1| 362|Homo sapiens PPP1R12C protein protein.
Length = 362
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 66 PPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 164
PPPCL ++ +R E PA P P A T P
Sbjct: 72 PPPCLENSSP-PSRIPEPESPAKPNVPTASTAP 103
>AL137618-1|CAB70844.1| 479|Homo sapiens hypothetical protein
protein.
Length = 479
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 66 PPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 164
PPPCL ++ +R E PA P P A T P
Sbjct: 188 PPPCLENSSP-PSRIPEPESPAKPNVPTASTAP 219
>AK027086-1|BAB15651.1| 602|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23433 fis, clone HRC12009. ).
Length = 602
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 66 PPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 164
PPPCL ++ +R E PA P P A T P
Sbjct: 312 PPPCLENSSP-PSRIPEPESPAKPNVPTASTAP 343
>AF312028-1|AAG60045.1| 782|Homo sapiens myosin binding subunit 85
protein.
Length = 782
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 66 PPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 164
PPPCL ++ +R E PA P P A T P
Sbjct: 491 PPPCLENSSP-PSRIPEPESPAKPNVPTASTAP 522
>AB209452-1|BAD92689.1| 736|Homo sapiens protein phosphatase 1,
regulatory subunit 12C variant protein.
Length = 736
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 66 PPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 164
PPPCL ++ +R E PA P P A T P
Sbjct: 446 PPPCLENSSP-PSRIPEPESPAKPNVPTASTAP 477
>AB002338-1|BAA20798.1| 1053|Homo sapiens KIAA0340 protein.
Length = 1053
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 81 RRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAAKE 209
+RA+ +A + GP P PTVP M P+ SH +E
Sbjct: 14 QRASRGGGQATKMSSAVGPRGPRPPTVPPPMQELPDLSHLTEE 56
>X59131-1|CAA41848.1| 1092|Homo sapiens hypothetical protein
protein.
Length = 1092
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 81 RRATHVKARAAEERLPAGPIA--PVAPTVPVGMGNHPEASHAAKEALK 218
++A+HV +A + PI+ P P G HP A HAA E L+
Sbjct: 806 QKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHA-HAASEVLE 852
>L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein
protein.
Length = 347
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 123 LPAGPIAPVAPTVPVG 170
LP+GP+AP AP P+G
Sbjct: 59 LPSGPLAPPAPAAPLG 74
>BT006720-1|AAP35366.1| 350|Homo sapiens forkhead box A3 protein.
Length = 350
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 123 LPAGPIAPVAPTVPVG 170
LP+GP+AP AP P+G
Sbjct: 60 LPSGPLAPPAPAAPLG 75
>BC038103-1|AAH38103.1| 1092|Homo sapiens ubiquitin specific
peptidase like 1 protein.
Length = 1092
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 81 RRATHVKARAAEERLPAGPIA--PVAPTVPVGMGNHPEASHAAKEALK 218
++A+HV +A + PI+ P P G HP A HAA E L+
Sbjct: 806 QKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHA-HAASEVLE 852
>BC036027-1|AAH36027.1| 1092|Homo sapiens ubiquitin specific
peptidase like 1 protein.
Length = 1092
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 81 RRATHVKARAAEERLPAGPIA--PVAPTVPVGMGNHPEASHAAKEALK 218
++A+HV +A + PI+ P P G HP A HAA E L+
Sbjct: 806 QKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHA-HAASEVLE 852
>BC016024-1|AAH16024.1| 350|Homo sapiens forkhead box A3 protein.
Length = 350
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 123 LPAGPIAPVAPTVPVG 170
LP+GP+AP AP P+G
Sbjct: 60 LPSGPLAPPAPAAPLG 75
>AL138681-1|CAH70264.1| 1092|Homo sapiens ubiquitin specific
peptidase like 1 protein.
Length = 1092
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 81 RRATHVKARAAEERLPAGPIA--PVAPTVPVGMGNHPEASHAAKEALK 218
++A+HV +A + PI+ P P G HP A HAA E L+
Sbjct: 806 QKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHA-HAASEVLE 852
>AK223473-1|BAD97193.1| 350|Homo sapiens forkhead box A3 variant
protein.
Length = 350
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 123 LPAGPIAPVAPTVPVG 170
LP+GP+AP AP P+G
Sbjct: 60 LPSGPLAPPAPAAPLG 75
>AF176114-1|AAD51980.1| 350|Homo sapiens hepatocyte nuclear
factor-3 gamma protein.
Length = 350
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 123 LPAGPIAPVAPTVPVG 170
LP+GP+AP AP P+G
Sbjct: 60 LPSGPLAPPAPAAPLG 75
>M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 623
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 57 QLIPPPCLRRATHVKARA-AEERLPAGPIAPVAPTVPVG 170
+L PPP ++R T ++ A + P GP P P+ P+G
Sbjct: 154 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 192
>AL138925-1|CAI15450.1| 717|Homo sapiens collagen type XIII alpha 1
protein.
Length = 717
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 57 QLIPPPCLRRATHVKARA-AEERLPAGPIAPVAPTVPVG 170
+L PPP ++R T ++ A + P GP P P+ P+G
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 285
>AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen
protein.
Length = 717
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 57 QLIPPPCLRRATHVKARA-AEERLPAGPIAPVAPTVPVG 170
+L PPP ++R T ++ A + P GP P P+ P+G
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 285
>AK127038-1|BAC86798.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ45094 fis, clone BRAWH3030810. ).
Length = 232
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 120 RLPAGPIAPVAPTVPVGMGNHPEASHAAKEAL 215
RLPA P +P P+ G HPE A A+
Sbjct: 6 RLPALPASPRVPSEGPGFSEHPEGPPALPPAI 37
>AF328788-1|AAK28532.1| 453|Homo sapiens amnionless protein.
Length = 453
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 60 LIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPV 167
L+ PP LRRA ++ R E PAG AP+ PV
Sbjct: 377 LVAPPLLRRAGRLRWRRHEAAAPAG--APLGFRNPV 410
>AF213668-1|AAG40147.1| 298|Homo sapiens bHLHZip transcription
factor BIGMAX gamma protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 84 RATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAA 203
RA +AR R A ++P +PT+ V G ++SH A
Sbjct: 26 RAGRARARRGAGRRGASLLSPKSPTLSVPRGCREDSSHPA 65
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,041,603
Number of Sequences: 237096
Number of extensions: 699354
Number of successful extensions: 2859
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2859
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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